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Clc02G15580 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G15580
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr02:28200005..28200682
RNA-Seq ExpressionClc02G15580
SyntenyClc02G15580
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0056089.1 hypothetical protein E6C27_scaffold323G00470 [Cucumis melo var. makuwa]3.3e-3382.35Show/hide
Query:  MPSSANNKTQKRPKPPSCWFSIFGFFKSRDGGRRRDDTMTMEDTRKVWPSDGDKGRHWVAEPGIDRKAKAYIDKIHYQIRSSQTE
        M SSANNK QKRPK  SC FSIFG FKSRDGG+R DD MTM+DTRKVWPSDGDKGRHWVAEPGIDRKAKAYI+KIH+QIRSS+ +
Subjt:  MPSSANNKTQKRPKPPSCWFSIFGFFKSRDGGRRRDDTMTMEDTRKVWPSDGDKGRHWVAEPGIDRKAKAYIDKIHYQIRSSQTE

KAG6586063.1 hypothetical protein SDJN03_18796, partial [Cucurbita argyrosperma subsp. sororia]1.8e-2371.08Show/hide
Query:  SSANNKTQKRPKPPSCWFSIFGFFKSRDGGRRRDDTMTMEDTRKVWPSDGDKGRHWVAEPGIDRKAKAYIDKIHYQIRSSQTE
        +S NNK QK PK PSC+FSIF  F+SRD  +RRD+  T++D RKVWPSD D+ R+WVAEPGIDRKAKAYIDKIH QIRSS TE
Subjt:  SSANNKTQKRPKPPSCWFSIFGFFKSRDGGRRRDDTMTMEDTRKVWPSDGDKGRHWVAEPGIDRKAKAYIDKIHYQIRSSQTE

KAG6599163.1 hypothetical protein SDJN03_08941, partial [Cucurbita argyrosperma subsp. sororia]9.1e-2367.47Show/hide
Query:  SANNKTQKRPKPPSCWFSIFGFFKSRDGGRR-RDDTMTMEDTRKVWPSDGDKGRHWVAEPGIDRKAKAYIDKIHYQIRSSQTE
        +++N  +++PK PSC FSI   FKSR   +R  DD + MEDTRKVWPSD DKGRHWVAEPGIDRKAKAYID+IHYQIR S  E
Subjt:  SANNKTQKRPKPPSCWFSIFGFFKSRDGGRR-RDDTMTMEDTRKVWPSDGDKGRHWVAEPGIDRKAKAYIDKIHYQIRSSQTE

XP_010094905.1 uncharacterized protein LOC21405464 [Morus notabilis]1.2e-0950Show/hide
Query:  NKTQKRPKPPSCWFSIFGFFKSRDGGRRRDDTMTMEDTRKVWPSDGDKGRHWVAEPGIDRKAKAYIDKIHYQIRSS
        N    R K  S +FS+F F ++     RR D   +ED R+VWPSD D+GR WVAEPGIDRKA+A+I KIH  + ++
Subjt:  NKTQKRPKPPSCWFSIFGFFKSRDGGRRRDDTMTMEDTRKVWPSDGDKGRHWVAEPGIDRKAKAYIDKIHYQIRSS

XP_021898970.1 uncharacterized protein LOC110815469 [Carica papaya]9.4e-1261.33Show/hide
Query:  RPKPPSCWFSIFGFFKSRDGGRRRDDTMT-MEDTRKVWPSDGDKGRHWVAEPGIDRKAKAYIDKIHYQIRSSQTE
        R K  S  FSIFG FKSR   RR  D  T ++DTRKVWPSD DK R+WVAEPGIDRKA A+I K H   R S++E
Subjt:  RPKPPSCWFSIFGFFKSRDGGRRRDDTMT-MEDTRKVWPSDGDKGRHWVAEPGIDRKAKAYIDKIHYQIRSSQTE

TrEMBL top hitse value%identityAlignment
A0A0A0KAK6 Uncharacterized protein1.6e-0954.79Show/hide
Query:  RPKPPSCWFSIFGFFKSRDGGRRRDDTMT--------MEDTRKVWPSDGDKGRHWVAEPGIDRKAKAYIDKIH
        R K     FSIF FFKSR G  R+ D           M  + KVWPSD DK  HWVAEPGIDRKAK YID+I+
Subjt:  RPKPPSCWFSIFGFFKSRDGGRRRDDTMT--------MEDTRKVWPSDGDKGRHWVAEPGIDRKAKAYIDKIH

A0A0A0LJ24 Uncharacterized protein6.1e-3382.35Show/hide
Query:  MPSSANNKTQKRPKPPSCWFSIFGFFKSRDGGRRRDDTMTMEDTRKVWPSDGDKGRHWVAEPGIDRKAKAYIDKIHYQIRSSQTE
        M SSANNK QKR K  SC FSIF  FKSRDGG+R DD MTM+DTRKVWPSDGDKGRHWVAEPGIDRKAKAYI+KIH+QIRSSQT+
Subjt:  MPSSANNKTQKRPKPPSCWFSIFGFFKSRDGGRRRDDTMTMEDTRKVWPSDGDKGRHWVAEPGIDRKAKAYIDKIHYQIRSSQTE

A0A5A7SWT9 Uncharacterized protein1.2e-0954.79Show/hide
Query:  RPKPPSCWFSIFGFFKSRDGGRRRDDTMT--------MEDTRKVWPSDGDKGRHWVAEPGIDRKAKAYIDKIH
        R K     FSIF FFKSR G  R+ D           M  + KVWPSD DK  HWVAEPGIDRKAK YID+I+
Subjt:  RPKPPSCWFSIFGFFKSRDGGRRRDDTMT--------MEDTRKVWPSDGDKGRHWVAEPGIDRKAKAYIDKIH

A0A5D3BDY2 Uncharacterized protein1.6e-3382.35Show/hide
Query:  MPSSANNKTQKRPKPPSCWFSIFGFFKSRDGGRRRDDTMTMEDTRKVWPSDGDKGRHWVAEPGIDRKAKAYIDKIHYQIRSSQTE
        M SSANNK QKRPK  SC FSIFG FKSRDGG+R DD MTM+DTRKVWPSDGDKGRHWVAEPGIDRKAKAYI+KIH+QIRSS+ +
Subjt:  MPSSANNKTQKRPKPPSCWFSIFGFFKSRDGGRRRDDTMTMEDTRKVWPSDGDKGRHWVAEPGIDRKAKAYIDKIHYQIRSSQTE

W9R5Q4 Uncharacterized protein5.6e-1050Show/hide
Query:  NKTQKRPKPPSCWFSIFGFFKSRDGGRRRDDTMTMEDTRKVWPSDGDKGRHWVAEPGIDRKAKAYIDKIHYQIRSS
        N    R K  S +FS+F F ++     RR D   +ED R+VWPSD D+GR WVAEPGIDRKA+A+I KIH  + ++
Subjt:  NKTQKRPKPPSCWFSIFGFFKSRDGGRRRDDTMTMEDTRKVWPSDGDKGRHWVAEPGIDRKAKAYIDKIHYQIRSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G05858.1 unknown protein1.8e-0852.17Show/hide
Query:  FSIFGFFKSRDGGRRRDDTMTMED---TRKVWPSDGDKGRHWVAEPGIDRKAKAYIDKIHYQIRSSQTE
        FS+F FFK+R   R   D  + +D   TRK   SD DK R+WVAEPGIDRKA A+I K H   R S++E
Subjt:  FSIFGFFKSRDGGRRRDDTMTMED---TRKVWPSDGDKGRHWVAEPGIDRKAKAYIDKIHYQIRSSQTE

AT5G26620.1 unknown protein3.3e-0764.29Show/hide
Query:  TRKVWPSDGDKGRHWVAEPGIDRKAKAYIDKIHYQIRSSQTE
        TRK W SD DK R+WVAEPGIDRKA A+I K H   R S++E
Subjt:  TRKVWPSDGDKGRHWVAEPGIDRKAKAYIDKIHYQIRSSQTE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCTTCAACACTCAAAACTCCCTTCTCTCTTTGTTCCTGCCCTACCTACCCATGCCCTCATCAGCCAACAACAAGACACAAAAGCGCCCCAAGCCCCCCTCGTGCTG
GTTCTCCATCTTCGGCTTCTTCAAGTCTCGAGATGGCGGAAGAAGGCGGGACGATACGATGACAATGGAAGATACACGAAAGGTGTGGCCGAGCGATGGCGACAAAGGTC
GACACTGGGTGGCTGAGCCTGGCATTGATAGAAAAGCCAAAGCTTATATCGATAAGATCCATTATCAAATCCGCTCCTCCCAAACCGAATGA
mRNA sequenceShow/hide mRNA sequence
TATATATATATAAATTCTTCATTCACCTCCCTTTCTCCCTCAAACAAACCAATATAATTAACCCCCTCTTCATATGATCTTCAACACTCAAAACTCCCTTCTCTCTTTGT
TCCTGCCCTACCTACCCATGCCCTCATCAGCCAACAACAAGACACAAAAGCGCCCCAAGCCCCCCTCGTGCTGGTTCTCCATCTTCGGCTTCTTCAAGTCTCGAGATGGC
GGAAGAAGGCGGGACGATACGATGACAATGGAAGATACACGAAAGGTGTGGCCGAGCGATGGCGACAAAGGTCGACACTGGGTGGCTGAGCCTGGCATTGATAGAAAAGC
CAAAGCTTATATCGATAAGATCCATTATCAAATCCGCTCCTCCCAAACCGAATGACAAACTCACTCCAAACCTTTCAATTACTTCTTCTTTTCATCGTTACATACATACA
TACATATATATAAATATAGATTAATGATCAATGATTAAGTGTACGTAATCTTATGCTCTCCTTCCTTTTCACACATGATAATTTTTTTTATTAGATAAGTGCTGACCATA
AATAAGTACAGCAGCCCAGACAACACCTAAGTTTTTATGTAGATATATAGTTTATGTTTTGAATGGTGTATTGTATTTCCCTTATTAATCATATATTGAATCATCTTGTT
TCATCCTTCCAAGTATTT
Protein sequenceShow/hide protein sequence
MIFNTQNSLLSLFLPYLPMPSSANNKTQKRPKPPSCWFSIFGFFKSRDGGRRRDDTMTMEDTRKVWPSDGDKGRHWVAEPGIDRKAKAYIDKIHYQIRSSQTE