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Clc02G15660 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G15660
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111023284
Genome locationClcChr02:28245650..28246413
RNA-Seq ExpressionClc02G15660
SyntenyClc02G15660
Gene Ontology termsGO:0010112 - regulation of systemic acquired resistance (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR031425 - NPR1/NH1-interacting protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599168.1 hypothetical protein SDJN03_08946, partial [Cucurbita argyrosperma subsp. sororia]8.7e-2556.43Show/hide
Query:  MEGVRKRRKLQN--------NNGKEDDEDEEEKLKLFFALIQNTKAMRDRMKPKEPTEEEK-SKGVWNPKFQPEDFIEDN-GNYNNKSNINLQLAAASSS
        MEG RKRRKLQN           +++DEDEEEK+KLFFALIQNTKAMRD++K KE  EE+  +KGVWNPKFQPEDFIED    + +KS   ++L AASSS
Subjt:  MEGVRKRRKLQN--------NNGKEDDEDEEEKLKLFFALIQNTKAMRDRMKPKEPTEEEK-SKGVWNPKFQPEDFIEDN-GNYNNKSNINLQLAAASSS

Query:  KTKQSNEK---------REEQEDKDKVGKGKNGLNLNLSL
         TKQSN+K         +E QE ++++ + K GL+LNLSL
Subjt:  KTKQSNEK---------REEQEDKDKVGKGKNGLNLNLSL

KGN61024.1 hypothetical protein Csa_021295 [Cucumis sativus]1.7e-2869.6Show/hide
Query:  MEGVRKRRKLQNNNGKEDDEDEEEKLKLFFALIQNTKAMRDRMK-PKEPTEEEKSKGVWNPKFQPEDFIEDNG-NYNNKSN-INLQLAAASSSKTKQSNE
        ME  RKRRKLQ    +E++E+E+EK++LF+ALIQNTKAMRD MK  KE TEEEKSKGVWNPKFQPEDF E++G NYNNKSN I LQL+AASSS TKQ NE
Subjt:  MEGVRKRRKLQNNNGKEDDEDEEEKLKLFFALIQNTKAMRDRMK-PKEPTEEEKSKGVWNPKFQPEDFIEDNG-NYNNKSN-INLQLAAASSSKTKQSNE

Query:  KREEQEDKD-KVGKGKNGLNLNLSL
        K++++EDK  KV + K GL+LNLSL
Subjt:  KREEQEDKD-KVGKGKNGLNLNLSL

XP_038889660.1 protein NIM1-INTERACTING 3 isoform X1 [Benincasa hispida]9.3e-2771.96Show/hide
Query:  MEGVRKRRKLQNNNGKEDDEDEEEKLKLFFALIQNTKAMRDRMKPKEPTEEEKSKGVWNPKFQPEDFIEDNGNYNNKSNINLQLAAASSSKTKQSNEKRE
        ME  RKRRKL+    +E+D+DEE ++KL FALIQN KAMR RMK KE  EEEKSKGVWNPKFQPEDFIED G YNNKSNI LQL AASSS TK SN K+E
Subjt:  MEGVRKRRKLQNNNGKEDDEDEEEKLKLFFALIQNTKAMRDRMKPKEPTEEEKSKGVWNPKFQPEDFIEDNGNYNNKSNINLQLAAASSSKTKQSNEKRE

Query:  EQEDKDK
        +QE +DK
Subjt:  EQEDKDK

XP_038889661.1 protein NIM1-INTERACTING 3 isoform X2 [Benincasa hispida]9.3e-2771.96Show/hide
Query:  MEGVRKRRKLQNNNGKEDDEDEEEKLKLFFALIQNTKAMRDRMKPKEPTEEEKSKGVWNPKFQPEDFIEDNGNYNNKSNINLQLAAASSSKTKQSNEKRE
        ME  RKRRKL+    +E+D+DEE ++KL FALIQN KAMR RMK KE  EEEKSKGVWNPKFQPEDFIED G YNNKSNI LQL AASSS TK SN K+E
Subjt:  MEGVRKRRKLQNNNGKEDDEDEEEKLKLFFALIQNTKAMRDRMKPKEPTEEEKSKGVWNPKFQPEDFIEDNGNYNNKSNINLQLAAASSSKTKQSNEKRE

Query:  EQEDKDK
        +QE +DK
Subjt:  EQEDKDK

XP_038889662.1 protein NIM1-INTERACTING 3 isoform X3 [Benincasa hispida]9.3e-2771.96Show/hide
Query:  MEGVRKRRKLQNNNGKEDDEDEEEKLKLFFALIQNTKAMRDRMKPKEPTEEEKSKGVWNPKFQPEDFIEDNGNYNNKSNINLQLAAASSSKTKQSNEKRE
        ME  RKRRKL+    +E+D+DEE ++KL FALIQN KAMR RMK KE  EEEKSKGVWNPKFQPEDFIED G YNNKSNI LQL AASSS TK SN K+E
Subjt:  MEGVRKRRKLQNNNGKEDDEDEEEKLKLFFALIQNTKAMRDRMKPKEPTEEEKSKGVWNPKFQPEDFIEDNGNYNNKSNINLQLAAASSSKTKQSNEKRE

Query:  EQEDKDK
        +QE +DK
Subjt:  EQEDKDK

TrEMBL top hitse value%identityAlignment
A0A0A0LJ23 Uncharacterized protein8.2e-2969.6Show/hide
Query:  MEGVRKRRKLQNNNGKEDDEDEEEKLKLFFALIQNTKAMRDRMK-PKEPTEEEKSKGVWNPKFQPEDFIEDNG-NYNNKSN-INLQLAAASSSKTKQSNE
        ME  RKRRKLQ    +E++E+E+EK++LF+ALIQNTKAMRD MK  KE TEEEKSKGVWNPKFQPEDF E++G NYNNKSN I LQL+AASSS TKQ NE
Subjt:  MEGVRKRRKLQNNNGKEDDEDEEEKLKLFFALIQNTKAMRDRMK-PKEPTEEEKSKGVWNPKFQPEDFIEDNG-NYNNKSN-INLQLAAASSSKTKQSNE

Query:  KREEQEDKD-KVGKGKNGLNLNLSL
        K++++EDK  KV + K GL+LNLSL
Subjt:  KREEQEDKD-KVGKGKNGLNLNLSL

A0A1U8HPI7 uncharacterized protein LOC1078883521.1e-1242.55Show/hide
Query:  MEGVRKRRKLQNNNGKED-DEDEEEKLKLFFALIQNTKAMRDRMK----PKEPTEEEKSK---------------GVWNPKFQPEDFIEDNGNYNNKSNI
        ME  RK+RK+ N   K+D D+DEEEK++ FFALI++T+ MRDR++    P  P EEE  K               G WNP FQ EDF+E + + +  +++
Subjt:  MEGVRKRRKLQNNNGKED-DEDEEEKLKLFFALIQNTKAMRDRMK----PKEPTEEEKSK---------------GVWNPKFQPEDFIEDNGNYNNKSNI

Query:  NLQLAAASSSKTKQSNEKREEQEDKDKVGKGKNGLNLNLSL
         L +A  SSSK ++  EKR E    D  G+G  GL+L LSL
Subjt:  NLQLAAASSSKTKQSNEKREEQEDKDKVGKGKNGLNLNLSL

A0A5D2A0M4 Uncharacterized protein1.1e-1242.55Show/hide
Query:  MEGVRKRRKLQNNNGKED-DEDEEEKLKLFFALIQNTKAMRDRMK----PKEPTEEEKSK---------------GVWNPKFQPEDFIEDNGNYNNKSNI
        ME  RK+RK+ N   K+D D+DEEEK++ FFALI++T+ MRDR++    P  P EEE  K               G WNP FQ EDF+E + + +  +++
Subjt:  MEGVRKRRKLQNNNGKED-DEDEEEKLKLFFALIQNTKAMRDRMK----PKEPTEEEKSK---------------GVWNPKFQPEDFIEDNGNYNNKSNI

Query:  NLQLAAASSSKTKQSNEKREEQEDKDKVGKGKNGLNLNLSL
         L +A  SSSK ++  EKR E    D  G+G  GL+L LSL
Subjt:  NLQLAAASSSKTKQSNEKREEQEDKDKVGKGKNGLNLNLSL

A0A6J1DQG7 LOW QUALITY PROTEIN: uncharacterized protein LOC1110232841.5e-2258.87Show/hide
Query:  MEGVRKRRKLQNN--NGKEDDEDEEEKLKLFFALIQNTKAMRDRMKPKEPT-EEEKSKGVWNPKFQPEDFIEDNGNYNNKSNINLQLAAASSSKTKQSNE
        ME VR++RKLQ++    +++DE+EEEK+KLFFALIQNTK++RDR+K K+   +++KSKGVWNPKFQPEDFIED    + KSN   Q AA+SS  TKQ N+
Subjt:  MEGVRKRRKLQNN--NGKEDDEDEEEKLKLFFALIQNTKAMRDRMKPKEPT-EEEKSKGVWNPKFQPEDFIEDNGNYNNKSNINLQLAAASSSKTKQSNE

Query:  KREEQEDKDKVGKGKNGLNLNLSL
        + EE++ KDKV +G   L+LNLSL
Subjt:  KREEQEDKDKVGKGKNGLNLNLSL

A0A7J9MT72 Uncharacterized protein1.7e-1343.26Show/hide
Query:  MEGVRKRRKLQNNNGKED-DEDEEEKLKLFFALIQNTKAMRDRMK----PKEPTEEEKSK---------------GVWNPKFQPEDFIEDNGNYNNKSNI
        ME  RK+RK+ N   K+D D+DEEEK++ FFALI++T+ MRDR++    P  P EEE  K               G WNP FQ EDF+E + + +  +++
Subjt:  MEGVRKRRKLQNNNGKED-DEDEEEKLKLFFALIQNTKAMRDRMK----PKEPTEEEKSK---------------GVWNPKFQPEDFIEDNGNYNNKSNI

Query:  NLQLAAASSSKTKQSNEKREEQEDKDKVGKGKNGLNLNLSL
         L +A  SSSK ++  EKR E    D  G+G  GL+LNLSL
Subjt:  NLQLAAASSSKTKQSNEKREEQEDKDKVGKGKNGLNLNLSL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGGAGTAAGAAAAAGAAGAAAATTGCAGAATAATAATGGGAAAGAAGATGATGAAGATGAAGAGGAAAAGCTGAAGTTGTTCTTTGCTCTGATTCAAAACACAAA
AGCCATGAGAGACAGAATGAAACCAAAAGAACCAACAGAAGAAGAGAAATCAAAAGGGGTTTGGAATCCAAAGTTCCAACCAGAAGATTTCATTGAAGATAATGGAAATT
ACAACAACAAATCCAACATCAATCTTCAACTAGCAGCTGCTTCATCTTCAAAAACAAAACAGAGCAATGAAAAGAGAGAAGAACAAGAAGATAAAGACAAGGTAGGAAAA
GGAAAAAATGGGCTTAACCTTAATCTCTCTCTTTGA
mRNA sequenceShow/hide mRNA sequence
AAAACCCTGTCTACAACATCTCTATGTGAATCACCTCTCTCTTTACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAATCCATTTCTCCAGAACCATGGAAGGAGTAAGAA
AAAGAAGAAAATTGCAGAATAATAATGGGAAAGAAGATGATGAAGATGAAGAGGAAAAGCTGAAGTTGTTCTTTGCTCTGATTCAAAACACAAAAGCCATGAGAGACAGA
ATGAAACCAAAAGAACCAACAGAAGAAGAGAAATCAAAAGGGGTTTGGAATCCAAAGTTCCAACCAGAAGATTTCATTGAAGATAATGGAAATTACAACAACAAATCCAA
CATCAATCTTCAACTAGCAGCTGCTTCATCTTCAAAAACAAAACAGAGCAATGAAAAGAGAGAAGAACAAGAAGATAAAGACAAGGTAGGAAAAGGAAAAAATGGGCTTA
ACCTTAATCTCTCTCTTTGAGTTTTTTTTGCTTTTTTGTGTGTTATTAACACTGTTTTATAATGGGTTGCTTTTGGTTTTTCTTCATTCTAATTTCATTCCTCTCCTCTT
ACCCATTTTTTCTTATGCTTTTAAGCTTGCTCTGTTTCCATTGAGCATTTGAACAACTTTTCTTTGGTGTTTTGAGTGGCAATTTTTAAGAAAACTGGAAGAGGTCATTG
TGAGAATGGAATATTGTTTTAGTTTGTAGCCCAATCTCATTGTTGTTATCTCATTCACTTGTGTTGAACAATATTTGGTAATTGATTGCTCATTTAGGTTTATG
Protein sequenceShow/hide protein sequence
MEGVRKRRKLQNNNGKEDDEDEEEKLKLFFALIQNTKAMRDRMKPKEPTEEEKSKGVWNPKFQPEDFIEDNGNYNNKSNINLQLAAASSSKTKQSNEKREEQEDKDKVGK
GKNGLNLNLSL