; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc02G15840 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G15840
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionRNA polymerase II-associated protein 3 isoform X1
Genome locationClcChr02:28389136..28397350
RNA-Seq ExpressionClc02G15840
SyntenyClc02G15840
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR001440 - Tetratricopeptide repeat 1
IPR011990 - Tetratricopeptide-like helical domain superfamily
IPR019734 - Tetratricopeptide repeat
IPR025986 - RNA-polymerase II-associated protein 3-like, C-terminal domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008453348.2 PREDICTED: RNA polymerase II-associated protein 3 isoform X1 [Cucumis melo]6.0e-22483.21Show/hide
Query:  MLFFALAQSVGIST-----AKTPTGERLRLRGIAGRFEKLFRRPAATIFHFLFLVFTLLFFCSPMADSSGKHGRDQPLDFQGFLNDLQDWELSSKGKDKK
        MLFFALAQSV IST     A TPTGE L     A      +  P +     LF    L FFCS MADSSGKHGRD PLDFQGFLNDLQDWE+S KGKDKK
Subjt:  MLFFALAQSVGIST-----AKTPTGERLRLRGIAGRFEKLFRRPAATIFHFLFLVFTLLFFCSPMADSSGKHGRDQPLDFQGFLNDLQDWELSSKGKDKK

Query:  LKPQAINKEKEGRRQTEKASAADYLKHYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAVAFANRAMAYLKIRRFQEAE
        LKPQAI KEKE RRQTEKASAADYLK YDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAVAFANRAMAYLKIRRFQEAE
Subjt:  LKPQAINKEKEGRRQTEKASAADYLKHYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAVAFANRAMAYLKIRRFQEAE

Query:  DDCTEALNLDDRYIKAYSRRATARKELGKAKGALEDAEFAQRLEPHNQEIKKQHAELRAIVGKAIFEKAADASRRSTKDKEIVGKSDSKAKSQDVPPVSS
        DDCTEALNLDDRYIKAYSRRATARKELGKAK ALEDAEFAQRLEP+NQEIKKQHA+LRA VGKAI EKA+ ASR S KDK+++ KSDS AK QD+PPVSS
Subjt:  DDCTEALNLDDRYIKAYSRRATARKELGKAKGALEDAEFAQRLEPHNQEIKKQHAELRAIVGKAIFEKAADASRRSTKDKEIVGKSDSKAKSQDVPPVSS

Query:  STPRTGLSAAQERIEVKEIGGENAVKASVRIEENEDRSTGAEITYKRVATNGFHKDSSSYSGALERDHVPRKQELKPSVQELASRAASRSMVEAAKNIIA
        ST RTGL AA+ER+E  E GGENAVK S R+EENED ST AEI  K+VATNGFHKDSSSY  ALERDH+PRK ELK SVQELAS+AASRSMVEAAKNIIA
Subjt:  STPRTGLSAAQERIEVKEIGGENAVKASVRIEENEDRSTGAEITYKRVATNGFHKDSSSYSGALERDHVPRKQELKPSVQELASRAASRSMVEAAKNIIA

Query:  PTTAYQFEVSWRGFSGDRALQARLLKAISPDKLPQIFKNALTAPILTDIVKCVATFFTEEPALAISSLENLAKVPRFSILMMCLPSSEKFDLLKIWDEVF
        PTTAYQFEVSWRGFS D+ALQA LLK ISP KLPQIFKNALTAPIL DIVKCVATFFTEEPALAIS LENL KVPRFSILMMCL SSEKFDLLKIWDEVF
Subjt:  PTTAYQFEVSWRGFSGDRALQARLLKAISPDKLPQIFKNALTAPILTDIVKCVATFFTEEPALAISSLENLAKVPRFSILMMCLPSSEKFDLLKIWDEVF

Query:  CDEAVPIEYAEMLDSLRSKYFPKQ
        CDEAVPIEYAEMLDSLRSKYF KQ
Subjt:  CDEAVPIEYAEMLDSLRSKYFPKQ

XP_038890653.1 RNA polymerase II-associated protein 3 isoform X1 [Benincasa hispida]1.1e-22589.53Show/hide
Query:  MADSSGKHGRDQPLDFQGFLNDLQDWELSSKGKDKKLKPQAINKEKEGRRQTEKASAADYLKHYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFK
        MADSSGKHGRDQP+DFQGFLNDLQDWELS KGKDKKLKPQAI+KEKEGRRQTEKASAADYLKHYDAVNRLSRNFQT+QSFVDAASEKEQGNEYFKQKKFK
Subjt:  MADSSGKHGRDQPLDFQGFLNDLQDWELSSKGKDKKLKPQAINKEKEGRRQTEKASAADYLKHYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFK

Query:  EAIDCYSRSIALSPTAVAFANRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKGALEDAEFAQRLEPHNQEIKKQHAELRAIVGKA
        EAIDCYSRSIALSPTAVAFANRAMAYLKIRR+QEAEDDCTEALNLDDRYIKAYSRRATARKELGKAK ALEDA+FAQRLEPHNQEIKKQHAELRA VGKA
Subjt:  EAIDCYSRSIALSPTAVAFANRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKGALEDAEFAQRLEPHNQEIKKQHAELRAIVGKA

Query:  IFEKAADASRRSTKDKEIVGKSDSKAKSQDVPPVSSSTPRTGLSAAQERIEVK--------EIGGENAVKASVRIEENEDRSTGAEITYKRVATNGFHKD
        I EKA+ ASR STKDKE V KSDS+AK +D+PPVSSSTPRTGLSAA+ER++VK        E GGENA K S  +EENEDRSTGAEI YK+VATNGFHKD
Subjt:  IFEKAADASRRSTKDKEIVGKSDSKAKSQDVPPVSSSTPRTGLSAAQERIEVK--------EIGGENAVKASVRIEENEDRSTGAEITYKRVATNGFHKD

Query:  SSSYSGALERDHVPRKQELKPSVQELASRAASRSMVEAAKNIIAPTTAYQFEVSWRGFSGDRALQARLLKAISPDKLPQIFKNALTAPILTDIVKCVATF
        SSSY+G LERD VPRKQELKPSVQE AS AASRSMVEAAKNIIAPTTAYQFEVSWRGFSGDR LQARLLKAI+P KLPQIFKNALTAPIL DIVKCVA F
Subjt:  SSSYSGALERDHVPRKQELKPSVQELASRAASRSMVEAAKNIIAPTTAYQFEVSWRGFSGDRALQARLLKAISPDKLPQIFKNALTAPILTDIVKCVATF

Query:  FTEEPALAISSLENLAKVPRFSILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFPKQ
        FTEEPALAIS LENLAKVPRFSILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYF KQ
Subjt:  FTEEPALAISSLENLAKVPRFSILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFPKQ

XP_038890654.1 RNA polymerase II-associated protein 3 isoform X2 [Benincasa hispida]6.9e-22891.09Show/hide
Query:  MADSSGKHGRDQPLDFQGFLNDLQDWELSSKGKDKKLKPQAINKEKEGRRQTEKASAADYLKHYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFK
        MADSSGKHGRDQP+DFQGFLNDLQDWELS KGKDKKLKPQAI+KEKEGRRQTEKASAADYLKHYDAVNRLSRNFQT+QSFVDAASEKEQGNEYFKQKKFK
Subjt:  MADSSGKHGRDQPLDFQGFLNDLQDWELSSKGKDKKLKPQAINKEKEGRRQTEKASAADYLKHYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFK

Query:  EAIDCYSRSIALSPTAVAFANRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKGALEDAEFAQRLEPHNQEIKKQHAELRAIVGKA
        EAIDCYSRSIALSPTAVAFANRAMAYLKIRR+QEAEDDCTEALNLDDRYIKAYSRRATARKELGKAK ALEDA+FAQRLEPHNQEIKKQHAELRA VGKA
Subjt:  EAIDCYSRSIALSPTAVAFANRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKGALEDAEFAQRLEPHNQEIKKQHAELRAIVGKA

Query:  IFEKAADASRRSTKDKEIVGKSDSKAKSQDVPPVSSSTPRTGLSAAQERIEVKEIGGENAVKASVRIEENEDRSTGAEITYKRVATNGFHKDSSSYSGAL
        I EKA+ ASR STKDKE V KSDS+AK +D+PPVSSSTPRTGLSAA+ER++VKE GGENA K S  +EENEDRSTGAEI YK+VATNGFHKDSSSY+G L
Subjt:  IFEKAADASRRSTKDKEIVGKSDSKAKSQDVPPVSSSTPRTGLSAAQERIEVKEIGGENAVKASVRIEENEDRSTGAEITYKRVATNGFHKDSSSYSGAL

Query:  ERDHVPRKQELKPSVQELASRAASRSMVEAAKNIIAPTTAYQFEVSWRGFSGDRALQARLLKAISPDKLPQIFKNALTAPILTDIVKCVATFFTEEPALA
        ERD VPRKQELKPSVQE AS AASRSMVEAAKNIIAPTTAYQFEVSWRGFSGDR LQARLLKAI+P KLPQIFKNALTAPIL DIVKCVA FFTEEPALA
Subjt:  ERDHVPRKQELKPSVQELASRAASRSMVEAAKNIIAPTTAYQFEVSWRGFSGDRALQARLLKAISPDKLPQIFKNALTAPILTDIVKCVATFFTEEPALA

Query:  ISSLENLAKVPRFSILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFPKQ
        IS LENLAKVPRFSILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYF KQ
Subjt:  ISSLENLAKVPRFSILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFPKQ

XP_038890655.1 RNA polymerase II-associated protein 3 isoform X3 [Benincasa hispida]1.9e-22590.65Show/hide
Query:  MADSSGKHGRDQPLDFQGFLNDLQDWELSSKGKDKKLKPQAINKEKEGRRQTEKASAADYLKHYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFK
        MADSSGKHGRDQP+DFQGFLNDLQDWELS KGKDKKLKPQAI+KEKEGRRQTEKASAADYLKHYDAVNRLSRNFQT+QSFVDAASEKEQGNEYFKQKKFK
Subjt:  MADSSGKHGRDQPLDFQGFLNDLQDWELSSKGKDKKLKPQAINKEKEGRRQTEKASAADYLKHYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFK

Query:  EAIDCYSRSIALSPTAVAFANRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKGALEDAEFAQRLEPHNQEIKKQHAELRAIVGKA
        EAIDCYSRSIALSPTAVAFANRAMAYLKIRR+QEAEDDCTEALNLDDRYIKAYSRRATARKELGKAK ALEDA+FAQRLEPHNQEIKKQHAELRA VGKA
Subjt:  EAIDCYSRSIALSPTAVAFANRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKGALEDAEFAQRLEPHNQEIKKQHAELRAIVGKA

Query:  IFEKAADASRRSTKDKEIVGKSDSKAKSQDVPPVSSSTPRTGLSAAQERIEVKEIGGENAVKASVRIEENEDRSTGAEITYKRVATNGFHKDSSSYSGAL
        I EKA+ ASR STKDKE V KSDS+AK +D+PPVSSSTPRTGLSAA+ER++  E GGENA K S  +EENEDRSTGAEI YK+VATNGFHKDSSSY+G L
Subjt:  IFEKAADASRRSTKDKEIVGKSDSKAKSQDVPPVSSSTPRTGLSAAQERIEVKEIGGENAVKASVRIEENEDRSTGAEITYKRVATNGFHKDSSSYSGAL

Query:  ERDHVPRKQELKPSVQELASRAASRSMVEAAKNIIAPTTAYQFEVSWRGFSGDRALQARLLKAISPDKLPQIFKNALTAPILTDIVKCVATFFTEEPALA
        ERD VPRKQELKPSVQE AS AASRSMVEAAKNIIAPTTAYQFEVSWRGFSGDR LQARLLKAI+P KLPQIFKNALTAPIL DIVKCVA FFTEEPALA
Subjt:  ERDHVPRKQELKPSVQELASRAASRSMVEAAKNIIAPTTAYQFEVSWRGFSGDRALQARLLKAISPDKLPQIFKNALTAPILTDIVKCVATFFTEEPALA

Query:  ISSLENLAKVPRFSILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFPKQ
        IS LENLAKVPRFSILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYF KQ
Subjt:  ISSLENLAKVPRFSILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFPKQ

XP_038890656.1 RNA polymerase II-associated protein 3 isoform X4 [Benincasa hispida]5.5e-21787.39Show/hide
Query:  MADSSGKHGRDQPLDFQGFLNDLQDWELSSKGKDKKLKPQAINKEKEGRRQTEKASAADYLKHYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFK
        MADSSGKHGRDQP+          DWELS KGKDKKLKPQAI+KEKEGRRQTEKASAADYLKHYDAVNRLSRNFQT+QSFVDAASEKEQGNEYFKQKKFK
Subjt:  MADSSGKHGRDQPLDFQGFLNDLQDWELSSKGKDKKLKPQAINKEKEGRRQTEKASAADYLKHYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFK

Query:  EAIDCYSRSIALSPTAVAFANRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKGALEDAEFAQRLEPHNQEIKKQHAELRAIVGKA
        EAIDCYSRSIALSPTAVAFANRAMAYLKIRR+QEAEDDCTEALNLDDRYIKAYSRRATARKELGKAK ALEDA+FAQRLEPHNQEIKKQHAELRA VGKA
Subjt:  EAIDCYSRSIALSPTAVAFANRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKGALEDAEFAQRLEPHNQEIKKQHAELRAIVGKA

Query:  IFEKAADASRRSTKDKEIVGKSDSKAKSQDVPPVSSSTPRTGLSAAQERIEVK--------EIGGENAVKASVRIEENEDRSTGAEITYKRVATNGFHKD
        I EKA+ ASR STKDKE V KSDS+AK +D+PPVSSSTPRTGLSAA+ER++VK        E GGENA K S  +EENEDRSTGAEI YK+VATNGFHKD
Subjt:  IFEKAADASRRSTKDKEIVGKSDSKAKSQDVPPVSSSTPRTGLSAAQERIEVK--------EIGGENAVKASVRIEENEDRSTGAEITYKRVATNGFHKD

Query:  SSSYSGALERDHVPRKQELKPSVQELASRAASRSMVEAAKNIIAPTTAYQFEVSWRGFSGDRALQARLLKAISPDKLPQIFKNALTAPILTDIVKCVATF
        SSSY+G LERD VPRKQELKPSVQE AS AASRSMVEAAKNIIAPTTAYQFEVSWRGFSGDR LQARLLKAI+P KLPQIFKNALTAPIL DIVKCVA F
Subjt:  SSSYSGALERDHVPRKQELKPSVQELASRAASRSMVEAAKNIIAPTTAYQFEVSWRGFSGDRALQARLLKAISPDKLPQIFKNALTAPILTDIVKCVATF

Query:  FTEEPALAISSLENLAKVPRFSILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFPKQ
        FTEEPALAIS LENLAKVPRFSILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYF KQ
Subjt:  FTEEPALAISSLENLAKVPRFSILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFPKQ

TrEMBL top hitse value%identityAlignment
A0A0A0LGI8 Uncharacterized protein1.8e-21387.39Show/hide
Query:  MADSSGKHGRDQPLDFQGFLNDLQDWELSSKGKDKKLKPQAINKEKEGRRQTEKASAADYLKHYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFK
        MADSS KHGRDQ LDFQGFLNDLQDWE+S KGKDKKLKPQAI KEKE RRQTEKASAADY+K YDAVNRLSRNFQTE SFVDAASEKEQGNEYFKQKKFK
Subjt:  MADSSGKHGRDQPLDFQGFLNDLQDWELSSKGKDKKLKPQAINKEKEGRRQTEKASAADYLKHYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFK

Query:  EAIDCYSRSIALSPTAVAFANRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKGALEDAEFAQRLEPHNQEIKKQHAELRAIVGKA
        EAIDCYSRSIALSPTAVAFANRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAK ALEDAEFAQRLEP+NQEIKKQHA+LRA VGKA
Subjt:  EAIDCYSRSIALSPTAVAFANRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKGALEDAEFAQRLEPHNQEIKKQHAELRAIVGKA

Query:  IFEKAADASRRSTKDKEIVGKSDSKAKSQDVPPVSSSTPRTGLSAAQERIEVKEIGGENAVKASVRIEENEDRSTGAEITYKRVATNGFHKDSSSYSGAL
        I EKA+ ASR STK+K+ + KSDS AK QD+PPVSSST RTGL AA+ER+E  E GG NAVK S R+EE+ED S+GAEIT K+VATNGFHKDSSSY  AL
Subjt:  IFEKAADASRRSTKDKEIVGKSDSKAKSQDVPPVSSSTPRTGLSAAQERIEVKEIGGENAVKASVRIEENEDRSTGAEITYKRVATNGFHKDSSSYSGAL

Query:  ERDHVPRKQELKPSVQELASRAASRSMVEAAKNIIAPTTAYQFEVSWRGFSGDRALQARLLKAISPDKLPQIFKNALTAPILTDIVKCVATFFTEEPALA
        ERDH+PRKQELK SV ELAS+AASRSMVEAAKNIIAPTTAYQFEVSWRGFSGD+ALQARLLK ISP KLPQIFK+ALTAPIL DIVKCVATFF EEPALA
Subjt:  ERDHVPRKQELKPSVQELASRAASRSMVEAAKNIIAPTTAYQFEVSWRGFSGDRALQARLLKAISPDKLPQIFKNALTAPILTDIVKCVATFFTEEPALA

Query:  ISSLENLAKVPRFSILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFPKQ
        IS LENL  VPRFSILMMCL SSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYF KQ
Subjt:  ISSLENLAKVPRFSILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFPKQ

A0A1S3BVH1 RNA polymerase II-associated protein 3 isoform X21.5e-21581.3Show/hide
Query:  MLFFALAQSVGIST-----AKTPTGERLRLRGIAGRFEKLFRRPAATIFHFLFLVFTLLFFCSPMADSSGKHGRDQPLDFQGFLNDLQDWELSSKGKDKK
        MLFFALAQSV IST     A TPTGE L     A      +  P +     LF    L FFCS MADSSGKHGRD PL          DWE+S KGKDKK
Subjt:  MLFFALAQSVGIST-----AKTPTGERLRLRGIAGRFEKLFRRPAATIFHFLFLVFTLLFFCSPMADSSGKHGRDQPLDFQGFLNDLQDWELSSKGKDKK

Query:  LKPQAINKEKEGRRQTEKASAADYLKHYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAVAFANRAMAYLKIRRFQEAE
        LKPQAI KEKE RRQTEKASAADYLK YDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAVAFANRAMAYLKIRRFQEAE
Subjt:  LKPQAINKEKEGRRQTEKASAADYLKHYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAVAFANRAMAYLKIRRFQEAE

Query:  DDCTEALNLDDRYIKAYSRRATARKELGKAKGALEDAEFAQRLEPHNQEIKKQHAELRAIVGKAIFEKAADASRRSTKDKEIVGKSDSKAKSQDVPPVSS
        DDCTEALNLDDRYIKAYSRRATARKELGKAK ALEDAEFAQRLEP+NQEIKKQHA+LRA VGKAI EKA+ ASR S KDK+++ KSDS AK QD+PPVSS
Subjt:  DDCTEALNLDDRYIKAYSRRATARKELGKAKGALEDAEFAQRLEPHNQEIKKQHAELRAIVGKAIFEKAADASRRSTKDKEIVGKSDSKAKSQDVPPVSS

Query:  STPRTGLSAAQERIEVKEIGGENAVKASVRIEENEDRSTGAEITYKRVATNGFHKDSSSYSGALERDHVPRKQELKPSVQELASRAASRSMVEAAKNIIA
        ST RTGL AA+ER+E  E GGENAVK S R+EENED ST AEI  K+VATNGFHKDSSSY  ALERDH+PRK ELK SVQELAS+AASRSMVEAAKNIIA
Subjt:  STPRTGLSAAQERIEVKEIGGENAVKASVRIEENEDRSTGAEITYKRVATNGFHKDSSSYSGALERDHVPRKQELKPSVQELASRAASRSMVEAAKNIIA

Query:  PTTAYQFEVSWRGFSGDRALQARLLKAISPDKLPQIFKNALTAPILTDIVKCVATFFTEEPALAISSLENLAKVPRFSILMMCLPSSEKFDLLKIWDEVF
        PTTAYQFEVSWRGFS D+ALQA LLK ISP KLPQIFKNALTAPIL DIVKCVATFFTEEPALAIS LENL KVPRFSILMMCL SSEKFDLLKIWDEVF
Subjt:  PTTAYQFEVSWRGFSGDRALQARLLKAISPDKLPQIFKNALTAPILTDIVKCVATFFTEEPALAISSLENLAKVPRFSILMMCLPSSEKFDLLKIWDEVF

Query:  CDEAVPIEYAEMLDSLRSKYFPKQ
        CDEAVPIEYAEMLDSLRSKYF KQ
Subjt:  CDEAVPIEYAEMLDSLRSKYFPKQ

A0A1S3BWU0 RNA polymerase II-associated protein 3 isoform X12.9e-22483.21Show/hide
Query:  MLFFALAQSVGIST-----AKTPTGERLRLRGIAGRFEKLFRRPAATIFHFLFLVFTLLFFCSPMADSSGKHGRDQPLDFQGFLNDLQDWELSSKGKDKK
        MLFFALAQSV IST     A TPTGE L     A      +  P +     LF    L FFCS MADSSGKHGRD PLDFQGFLNDLQDWE+S KGKDKK
Subjt:  MLFFALAQSVGIST-----AKTPTGERLRLRGIAGRFEKLFRRPAATIFHFLFLVFTLLFFCSPMADSSGKHGRDQPLDFQGFLNDLQDWELSSKGKDKK

Query:  LKPQAINKEKEGRRQTEKASAADYLKHYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAVAFANRAMAYLKIRRFQEAE
        LKPQAI KEKE RRQTEKASAADYLK YDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAVAFANRAMAYLKIRRFQEAE
Subjt:  LKPQAINKEKEGRRQTEKASAADYLKHYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAVAFANRAMAYLKIRRFQEAE

Query:  DDCTEALNLDDRYIKAYSRRATARKELGKAKGALEDAEFAQRLEPHNQEIKKQHAELRAIVGKAIFEKAADASRRSTKDKEIVGKSDSKAKSQDVPPVSS
        DDCTEALNLDDRYIKAYSRRATARKELGKAK ALEDAEFAQRLEP+NQEIKKQHA+LRA VGKAI EKA+ ASR S KDK+++ KSDS AK QD+PPVSS
Subjt:  DDCTEALNLDDRYIKAYSRRATARKELGKAKGALEDAEFAQRLEPHNQEIKKQHAELRAIVGKAIFEKAADASRRSTKDKEIVGKSDSKAKSQDVPPVSS

Query:  STPRTGLSAAQERIEVKEIGGENAVKASVRIEENEDRSTGAEITYKRVATNGFHKDSSSYSGALERDHVPRKQELKPSVQELASRAASRSMVEAAKNIIA
        ST RTGL AA+ER+E  E GGENAVK S R+EENED ST AEI  K+VATNGFHKDSSSY  ALERDH+PRK ELK SVQELAS+AASRSMVEAAKNIIA
Subjt:  STPRTGLSAAQERIEVKEIGGENAVKASVRIEENEDRSTGAEITYKRVATNGFHKDSSSYSGALERDHVPRKQELKPSVQELASRAASRSMVEAAKNIIA

Query:  PTTAYQFEVSWRGFSGDRALQARLLKAISPDKLPQIFKNALTAPILTDIVKCVATFFTEEPALAISSLENLAKVPRFSILMMCLPSSEKFDLLKIWDEVF
        PTTAYQFEVSWRGFS D+ALQA LLK ISP KLPQIFKNALTAPIL DIVKCVATFFTEEPALAIS LENL KVPRFSILMMCL SSEKFDLLKIWDEVF
Subjt:  PTTAYQFEVSWRGFSGDRALQARLLKAISPDKLPQIFKNALTAPILTDIVKCVATFFTEEPALAISSLENLAKVPRFSILMMCLPSSEKFDLLKIWDEVF

Query:  CDEAVPIEYAEMLDSLRSKYFPKQ
        CDEAVPIEYAEMLDSLRSKYF KQ
Subjt:  CDEAVPIEYAEMLDSLRSKYFPKQ

A0A6J1FCA0 RNA polymerase II-associated protein 3 isoform X19.1e-21086.27Show/hide
Query:  MADSSGKHGRDQPLDFQGFLNDLQDWELSSKGKDKKLKPQAINKEKEGRRQTEKASAADYLKHYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFK
        MADSSGKHGRDQPLDFQGFLNDLQDWELS  G+DKKLKP AI+KEKEG RQ  KA+AADY+KHYDAVN LS    TEQSFVDAASEKEQGNEYFKQKKFK
Subjt:  MADSSGKHGRDQPLDFQGFLNDLQDWELSSKGKDKKLKPQAINKEKEGRRQTEKASAADYLKHYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFK

Query:  EAIDCYSRSIALSPTAVAFANRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKGALEDAEFAQRLEPHNQEIKKQHAELRAIVGKA
        EAI CYSRSIALSPTAVAFANRAMAYLKIRRFQEAEDDCTEALN DDRYIKAYSRRATARKELGKAK ALEDAEFAQRLEP+NQEIKKQHAELRA VGKA
Subjt:  EAIDCYSRSIALSPTAVAFANRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKGALEDAEFAQRLEPHNQEIKKQHAELRAIVGKA

Query:  IFEKAADASRRSTKDKEIVGKSDSKAKSQDVPPVSSSTPRTGLSAAQERIEVKEIGGENAVKASVRIEENEDRSTGAEITYKRVATNGFHKDSSSYSGAL
        I EKA+ ASR STK+K++VGKSDS+AK QD+PPVSSST R+GLSAAQE +E  E GGE AVK S R+E  E RSTGAEI YKR ATNG HKD +S  GAL
Subjt:  IFEKAADASRRSTKDKEIVGKSDSKAKSQDVPPVSSSTPRTGLSAAQERIEVKEIGGENAVKASVRIEENEDRSTGAEITYKRVATNGFHKDSSSYSGAL

Query:  ERDHVPRKQELKPSVQELASRAASRSMVEAAKNIIAPTTAYQFEVSWRGFSGDRALQARLLKAISPDKLPQIFKNALTAPILTDIVKCVATFFTEEPALA
        ER+HV RKQELKPSVQELASRAASRSMVEAAKNI+APTTAYQFEVSWRGFSGDRALQARLLKAISP KLPQIFKNAL+APIL D VKCVATFFTEE ALA
Subjt:  ERDHVPRKQELKPSVQELASRAASRSMVEAAKNIIAPTTAYQFEVSWRGFSGDRALQARLLKAISPDKLPQIFKNALTAPILTDIVKCVATFFTEEPALA

Query:  ISSLENLAKVPRFSILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFPK
        IS LENLAKVPRFSILMMCLPS+EK DLLKIWDEVFCDEAVPIEYAEMLDSLRSKYF K
Subjt:  ISSLENLAKVPRFSILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFPK

A0A6J1HPT1 RNA polymerase II-associated protein 3 isoform X16.3e-21186.49Show/hide
Query:  MADSSGKHGRDQPLDFQGFLNDLQDWELSSKGKDKKLKPQAINKEKEGRRQTEKASAADYLKHYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFK
        MADSSGKHGRDQPLDFQGFLNDLQDWELS  G+DKKLKP AI+KEKEG RQ  KA+AADY+KHYDA+N LS     EQSFVDAASEKEQGNEYFKQKKFK
Subjt:  MADSSGKHGRDQPLDFQGFLNDLQDWELSSKGKDKKLKPQAINKEKEGRRQTEKASAADYLKHYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFK

Query:  EAIDCYSRSIALSPTAVAFANRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKGALEDAEFAQRLEPHNQEIKKQHAELRAIVGKA
        EAI CYSRSIALSPTAVAFANRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAK ALEDAEFAQRLEP+NQEIKKQHAELRA VGKA
Subjt:  EAIDCYSRSIALSPTAVAFANRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKGALEDAEFAQRLEPHNQEIKKQHAELRAIVGKA

Query:  IFEKAADASRRSTKDKEIVGKSDSKAKSQDVPPVSSSTPRTGLSAAQERIEVKEIGGENAVKASVRIEENEDRSTGAEITYKRVATNGFHKDSSSYSGAL
        I EKA+ ASR STKDK++VGKSDS+AK QD+PPVSSST R+GLSAAQE +E  E GGE AVK S R+E  E RSTGAEI YKR ATNG HKD +S  GAL
Subjt:  IFEKAADASRRSTKDKEIVGKSDSKAKSQDVPPVSSSTPRTGLSAAQERIEVKEIGGENAVKASVRIEENEDRSTGAEITYKRVATNGFHKDSSSYSGAL

Query:  ERDHVPRKQELKPSVQELASRAASRSMVEAAKNIIAPTTAYQFEVSWRGFSGDRALQARLLKAISPDKLPQIFKNALTAPILTDIVKCVATFFTEEPALA
        ER+HV RKQELKPSVQELASRAASRSMVEAAKNI+APTTAYQFEVSWRGFSGDRALQARLLKAISP KLPQIFKNAL+APIL DIVKCVATFFTEE ALA
Subjt:  ERDHVPRKQELKPSVQELASRAASRSMVEAAKNIIAPTTAYQFEVSWRGFSGDRALQARLLKAISPDKLPQIFKNALTAPILTDIVKCVATFFTEEPALA

Query:  ISSLENLAKVPRFSILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFPK
        IS LENLAKVPRFSILMMCLPS+EKFDLLKIWDEVFCDEAVPIEYAEMLDSLRS+YF K
Subjt:  ISSLENLAKVPRFSILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFPK

SwissProt top hitse value%identityAlignment
Q5ZKQ3 RNA polymerase II-associated protein 39.9e-2828.47Show/hide
Query:  SKGKDKKLKPQAINKEKEGRRQTEKASAADYLKHYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPT-AVAFANRAMAYLK
        +K + KK++ QA++ E   +++ E+A  ++  ++        R  + EQ    A +EK+ GN YFK+ K++ AI+CY+R IA   T A+  ANRAMAYLK
Subjt:  SKGKDKKLKPQAINKEKEGRRQTEKASAADYLKHYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPT-AVAFANRAMAYLK

Query:  IRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKGALEDAEFAQRLEPHNQEIKKQHAELR---AIVGKAIFEKAADASRRSTKDKEIVGKSDSK
        I++++EAE+DCT+AL LD  Y KA++RR  AR  LGK K A++D E   +LEP N++   +  ++R   A   ++  E+      + ++ K IV  + + 
Subjt:  IRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKGALEDAEFAQRLEPHNQEIKKQHAELR---AIVGKAIFEKAADASRRSTKDKEIVGKSDSK

Query:  AKSQDVPPVSSSTPRTGLSAAQERIEVKEIGGE-------------NAVKASVRIEENEDRSTGAEIT---YKRVATNGFHKDSSSYSGALERDHVPRKQ
           +   P+              RI V+E+  +             N  K SV IE  E+     ++T     +       + +   S  L         
Subjt:  AKSQDVPPVSSSTPRTGLSAAQERIEVKEIGGE-------------NAVKASVRIEENEDRSTGAEIT---YKRVATNGFHKDSSSYSGALERDHVPRKQ

Query:  ELKPSVQELASRAASRSMVEAAKNIIAPTTAYQFEVSWRGFSGDRALQARLLKAISPDKLPQIFKNALTAPILTDIVKCVATFF--TEEPALAISSLENL
         L PS+ +   R    S   A+     P  ++Q E  +R            LK I P   P++F+ +L   +   I++ +  F+   EEP+L +  L+ L
Subjt:  ELKPSVQELASRAASRSMVEAAKNIIAPTTAYQFEVSWRGFSGDRALQARLLKAISPDKLPQIFKNALTAPILTDIVKCVATFF--TEEPALAISSLENL

Query:  AKVPRFSILMMCLPSSEK
        +++ RF + +M +  SEK
Subjt:  AKVPRFSILMMCLPSSEK

Q68FQ7 RNA polymerase II-associated protein 36.8e-2929.52Show/hide
Query:  AASEKEQGNEYFKQKKFKEAIDCYSRSIALSPT-AVAFANRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKGALEDAEFAQRLEP
        A +EK+ GN +FK+ K+++AI+CY+R IA   T A+  ANRAMAYLK+++++EAE DCT+A+ LD  Y KA++RR TAR  LGK   A +D E    LEP
Subjt:  AASEKEQGNEYFKQKKFKEAIDCYSRSIALSPT-AVAFANRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKGALEDAEFAQRLEP

Query:  HNQEIKKQHAELRAIVGKAIFEKAA--DASRRSTKDKEIVGKSDSKAKSQDVPPVSSSTPRTGLSAAQERIEVKEIG----GENAVKASVRIEENEDRST
         N++   + + ++    K + EK    D    ST+   +V   DS              P  G   A +++ ++E G      +A ++S  + E++  + 
Subjt:  HNQEIKKQHAELRAIVGKAIFEKAA--DASRRSTKDKEIVGKSDSKAKSQDVPPVSSSTPRTGLSAAQERIEVKEIG----GENAVKASVRIEENEDRST

Query:  GAEITYKRVATNGFHKDSSSYSGALERDHVPR----------------KQELKPSVQELASRAASRSMVEAAKNIIAPTTA--YQFEVSWRGFSGDRALQ
          +   K+     F +  S  SG   R  V +                KQ ++ SV E  S   +++  + A  ++ P  A  +Q E  +R       + 
Subjt:  GAEITYKRVATNGFHKDSSSYSGALERDHVPR----------------KQELKPSVQELASRAASRSMVEAAKNIIAPTTA--YQFEVSWRGFSGDRALQ

Query:  ARLLKAISPDKLPQIFKNALTAPILTDIVKCVATFFT--EEPALAISSLENLAKVPRFSILMMCLPSSEKFDLLKI
         + +K I P   P++F+  L   +   I+K +  F+   E+PAL    LE L+++ RF + +M +  +E+ +L K+
Subjt:  ARLLKAISPDKLPQIFKNALTAPILTDIVKCVATFFT--EEPALAISSLENLAKVPRFSILMMCLPSSEKFDLLKI

Q6NU95 RNA polymerase II-associated protein 32.1e-2527.83Show/hide
Query:  ELSSKGKDKKLKPQAINKEKEGRRQTEKASAADYLKHYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPT-AVAFANRAMA
        EL +   + K + + IN+E        + + A   K         +  + +Q    A  +K+ GN YFK+ K++ AI+CYS+ +    T A+  ANRAMA
Subjt:  ELSSKGKDKKLKPQAINKEKEGRRQTEKASAADYLKHYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPT-AVAFANRAMA

Query:  YLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKGALEDAEFAQRLEPHNQ----EIKKQHAELRAIVGKAIFEKAADASRRSTKDKEIVGK
        YLKI++++EAE DCT A++LD  Y KA++RR TA   LGK K A ED E   +L+P N+    E+ K   ELR+I      EK  + ++ S + K I   
Subjt:  YLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKGALEDAEFAQRLEPHNQ----EIKKQHAELRAIVGKAIFEKAADASRRSTKDKEIVGK

Query:  SDSKAKSQDVPPVSSSTPRTGLSAAQERIEVKEIGGENAVKASVRIEENEDRSTGAEITYKRVATNGFHKDSSSYSGALERDHVPRKQEL-------KPS
               + +P + S+ P         R+ ++E+GG   +  +   E N  ++   ++T +    +   + +   S  +    +P+ +E+       +P+
Subjt:  SDSKAKSQDVPPVSSSTPRTGLSAAQERIEVKEIGGENAVKASVRIEENEDRSTGAEITYKRVATNGFHKDSSSYSGALERDHVPRKQEL-------KPS

Query:  VQE--LASRAASRSMVEAAKNI---------IAPTTAYQFEVSWRGFSGDRALQARLLKAISPDKLPQIFKNALTAPILTDIVKCVATFF--TEEPALAI
          E  L SR +   + +                PT ++Q E  +R   G+  L    LK I P    ++FK AL   + +DI+  +   F   + P L  
Subjt:  VQE--LASRAASRSMVEAAKNI---------IAPTTAYQFEVSWRGFSGDRALQARLLKAISPDKLPQIFKNALTAPILTDIVKCVATFF--TEEPALAI

Query:  SSLENLAKVPRFSILMMCLPSSEK
          L+ L+++ RF + +M L  S+K
Subjt:  SSLENLAKVPRFSILMMCLPSSEK

Q9D706 RNA polymerase II-associated protein 33.8e-2731.64Show/hide
Query:  EQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPT-AVAFANRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKGALEDAEF
        +Q    A +EK+ GN +FK+ K+++AI+CY+R IA   T A+  ANRAMAYLKI+R++EAE DCT+A+ LD  Y KA++RR TAR  LGK   A +D E 
Subjt:  EQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPT-AVAFANRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKGALEDAEF

Query:  AQRLEPHNQEIKKQHAELRAIVGKAIFEKA--ADASRRSTKDKEIVGKSDSKAKSQDVPPVSSSTPRTGLSAAQERIEVKEIGG----ENAVKASVRIEE
           LEP N    KQ A   + + K + EK    D    ST+   +V       K+ D PP        G   A +++ ++E G      +A  +S  + E
Subjt:  AQRLEPHNQEIKKQHAELRAIVGKAIFEKA--ADASRRSTKDKEIVGKSDSKAKSQDVPPVSSSTPRTGLSAAQERIEVKEIGG----ENAVKASVRIEE

Query:  NEDRSTGAEIT-YKRVATNGFH------------KDSSSYSGALERDHVPRKQELKPSVQELASRAASR--SMVEAAKNIIAPTTAYQFEVSWRGFSGDR
        + DR+T A  T  K+  + G              K  +    +  +  V  KQ+ +    E AS  A +    + AA     P  ++Q E  +R      
Subjt:  NEDRSTGAEIT-YKRVATNGFH------------KDSSSYSGALERDHVPRKQELKPSVQELASRAASR--SMVEAAKNIIAPTTAYQFEVSWRGFSGDR

Query:  ALQARLLKAISPDKLPQIFKNALTAPILTDIVKCVATFF--TEEPALAISSLENLAKVPRFSILMMCLPSSEK
         +  + +K I P   P++F+  L   +   I+K +  F+   E+PAL    LE L+++ RF + +M +   E+
Subjt:  ALQARLLKAISPDKLPQIFKNALTAPILTDIVKCVATFF--TEEPALAISSLENLAKVPRFSILMMCLPSSEK

Q9H6T3 RNA polymerase II-associated protein 31.3e-2427.59Show/hide
Query:  LQDWELSSKGKDK--KLKPQAINKEKEGRRQTEKASAAD--YLKHYDAVNRLS----RNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIAL-S
        LQ  E + K  ++  +L+P       E R+ ++  ++ +  Y K  D V + +    +  + +Q+   A SEK++GN +FK+ K++ AI+CY+R IA   
Subjt:  LQDWELSSKGKDK--KLKPQAINKEKEGRRQTEKASAAD--YLKHYDAVNRLS----RNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIAL-S

Query:  PTAVAFANRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKGALEDAEFAQRLEPHNQEIKKQHAELRAIVGKAIFEKA--ADASRR
          A+  ANRAMAYLKI++++EAE DCT+A+ LD  Y KA++RR TAR  LGK   A +D E    LEP N++   + ++++    K + EK    D    
Subjt:  PTAVAFANRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKGALEDAEFAQRLEPHNQEIKKQHAELRAIVGKAIFEKA--ADASRR

Query:  STKDKEIVGKSDSKAKSQDVPPVSS-------------STPRTGLSAAQERIEVKEIGGENAVKA----SVRIEENEDRSTGAEITYKRVATNGFHKDSS
        ST+ + +V   D+        P+                 P +  +AA E      I   N + A    S +    +D    ++    +V       D+S
Subjt:  STKDKEIVGKSDSKAKSQDVPPVSS-------------STPRTGLSAAQERIEVKEIGGENAVKA----SVRIEENEDRSTGAEITYKRVATNGFHKDSS

Query:  SYSGALERDHVPRKQELKPSVQELASRAASRSMVEAAKNIIAPTTA--YQFEVSWRGFSGDRALQARLLKAISPDKLPQIFKNALTAPILTDIVKCVATF
        S      +     KQ++  S  E       +   + A  ++ P  A  +Q E  +R       +  + LK I P   P++F+  L   +   IVK +  F
Subjt:  SYSGALERDHVPRKQELKPSVQELASRAASRSMVEAAKNIIAPTTA--YQFEVSWRGFSGDRALQARLLKAISPDKLPQIFKNALTAPILTDIVKCVATF

Query:  F--TEEPALAISSLENLAKVPRFSILMMCLPSSEK
        +   E+P L    L+ L+++ RF + +M +  +EK
Subjt:  F--TEEPALAISSLENLAKVPRFSILMMCLPSSEK

Arabidopsis top hitse value%identityAlignment
AT1G56440.1 Tetratricopeptide repeat (TPR)-like superfamily protein3.5e-12153.12Show/hide
Query:  MADSSGKHGRDQPLDFQGFLNDLQDWELSSKGKDKKLKPQAINKEKEGRRQTEKASAA--DYLKHYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKK
        MA S  KHGRDQ  DFQGF NDLQDWELS K KDKK+K Q  N           + +   D+ K Y ++  LS +   E S +D++SEKEQGNE+FKQKK
Subjt:  MADSSGKHGRDQPLDFQGFLNDLQDWELSSKGKDKKLKPQAINKEKEGRRQTEKASAA--DYLKHYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKK

Query:  FKEAIDCYSRSIALSPTAVAFANRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKGALEDAEFAQRLEPHNQEIKKQHAELRAIVG
        F EAIDCYSRSIALSP AV +ANRAMAYLKI+R++EAE DCTEALNLDDRYIKAYSRRATARKELG  K A EDAEFA RLEP +QE+KKQ+A++++++ 
Subjt:  FKEAIDCYSRSIALSPTAVAFANRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKGALEDAEFAQRLEPHNQEIKKQHAELRAIVG

Query:  KAIFEKAADASRRSTKDKEIVGKSDSKAKSQDVPPVSSSTPRTGLSAAQERIEVKEIGGENAVKASVRIE--ENEDRSTG--------AEITYKRVATNG
        K I EKA  A + +   +E++  S    K Q      +S P T L A   R  V+ + G N       IE  + E++S           EI   +  T G
Subjt:  KAIFEKAADASRRSTKDKEIVGKSDSKAKSQDVPPVSSSTPRTGLSAAQERIEVKEIGGENAVKASVRIE--ENEDRSTG--------AEITYKRVATNG

Query:  FH--------KDSSSYSGALERDHVPRKQELKPSVQELASRAASRSMVEAAKNIIAPTTAYQFEVSWRGFSGDRALQARLLKAISPDKLPQIFKNALTAP
                   D +    +   + V ++ ELKPSVQELA+ AAS +M EA+KNI  P +AY+FE SWR FSGD AL+++LLK  +P  LPQIFKNALT+P
Subjt:  FH--------KDSSSYSGALERDHVPRKQELKPSVQELASRAASRSMVEAAKNIIAPTTAYQFEVSWRGFSGDRALQARLLKAISPDKLPQIFKNALTAP

Query:  ILTDIVKCVATFFTEEPALAISSLENLAKVPRFSILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFPKQ
        +L DI+KCVA+FFTE+  LA+  +ENL KVPRF++L+MCL S+EK +LLKIW++VFC++A P+EYAE+LD LRS+Y  KQ
Subjt:  ILTDIVKCVATFFTEEPALAISSLENLAKVPRFSILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFPKQ

AT1G56440.2 Tetratricopeptide repeat (TPR)-like superfamily protein5.6e-11951.2Show/hide
Query:  MADSSGKHGRDQPLDFQGFLNDLQDWELSSKGKDKKLKPQAINKEKEGRRQTEKASAA--DYLKHYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKK
        MA S  KHGRDQ  DFQGF NDLQDWELS K KDKK+K Q  N           + +   D+ K Y ++  LS +   E S +D++SEKEQGNE+FKQKK
Subjt:  MADSSGKHGRDQPLDFQGFLNDLQDWELSSKGKDKKLKPQAINKEKEGRRQTEKASAA--DYLKHYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKK

Query:  FKEAIDCYSRSIALSPTAVAFANRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKGALEDAEFAQRLEPHNQEIKKQHAELRAIVG
        F EAIDCYSRSIALSP AV +ANRAMAYLKI+R++EAE DCTEALNLDDRYIKAYSRRATARKELG  K A EDAEFA RLEP +QE+KKQ+A++++++ 
Subjt:  FKEAIDCYSRSIALSPTAVAFANRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKGALEDAEFAQRLEPHNQEIKKQHAELRAIVG

Query:  KAIFEKAADASRRSTKDKEIVGKSDSKAKSQDVPPVSSSTPRTGLSAAQERIEVKEIGGENAVKASVRIEE---------------------NEDRSTGA
        K I EKA  A + +   +E++  S    K Q      +S P T L A   R  V+ + G N       IE                       E    G+
Subjt:  KAIFEKAADASRRSTKDKEIVGKSDSKAKSQDVPPVSSSTPRTGLSAAQERIEVKEIGGENAVKASVRIEE---------------------NEDRSTGA

Query:  -------EITYKRVATNGFH--------KDSSSYSGALERDHVPRKQELKPSVQELASRAASRSMVEAAKNIIAPTTAYQFEVSWRGFSGDRALQARLLK
               EI   +  T G           D +    +   + V ++ ELKPSVQELA+ AAS +M EA+KNI  P +AY+FE SWR FSGD AL+++LLK
Subjt:  -------EITYKRVATNGFH--------KDSSSYSGALERDHVPRKQELKPSVQELASRAASRSMVEAAKNIIAPTTAYQFEVSWRGFSGDRALQARLLK

Query:  AISPDKLPQIFKNALTAPILTDIVKCVATFFTEEPALAISSLENLAKVPRFSILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFPKQ
          +P  LPQIFKNALT+P+L DI+KCVA+FFTE+  LA+  +ENL KVPRF++L+MCL S+EK +LLKIW++VFC++A P+EYAE+LD LRS+Y  KQ
Subjt:  AISPDKLPQIFKNALTAPILTDIVKCVATFFTEEPALAISSLENLAKVPRFSILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFPKQ

AT2G42810.1 protein phosphatase 5.23.4e-1538.36Show/hide
Query:  QTEQSFVDAASE-KEQGNEYFKQKKFKEAIDCYSRSIAL-SPTAVAFANRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKGALED
        + E S V  A E K Q NE FK  K+  AID Y+++I L S  AV +ANRA A+ K+  +  A  D ++A+ +D RY K Y RR  A   +GK K AL+D
Subjt:  QTEQSFVDAASE-KEQGNEYFKQKKFKEAIDCYSRSIAL-SPTAVAFANRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKGALED

Query:  AEFAQRLEPHNQEIKKQHAELRAIVGKAIFEKAAD---ASRRSTKD
         +  +RL P++ +  ++  E    V K  FE+A     + RRS  +
Subjt:  AEFAQRLEPHNQEIKKQHAELRAIVGKAIFEKAAD---ASRRSTKD

AT2G42810.2 protein phosphatase 5.25.8e-1534.05Show/hide
Query:  QTEQSFVDAASE-KEQGNEYFKQKKFKEAIDCYSRSIAL-SPTAVAFANRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKGALED
        + E S V  A E K Q NE FK  K+  AID Y+++I L S  AV +ANRA A+ K+  +  A  D ++A+ +D RY K Y RR  A   +GK K AL+D
Subjt:  QTEQSFVDAASE-KEQGNEYFKQKKFKEAIDCYSRSIAL-SPTAVAFANRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKGALED

Query:  AEFAQRLEPHNQEIKKQHAELRAIVGKAIFEKAADASRRSTKDKEIVGKSDSKAKSQDVPPVSSSTPRTGLSAAQERIEVKEIGG
         +  +RL P++ +  ++  E    V K  FE+A         ++  V +S       + P  SS   +T L+A    + V  + G
Subjt:  AEFAQRLEPHNQEIKKQHAELRAIVGKAIFEKAADASRRSTKDKEIVGKSDSKAKSQDVPPVSSSTPRTGLSAAQERIEVKEIGG

AT3G17970.1 translocon at the outer membrane of chloroplasts 64-III1.7e-1947.71Show/hide
Query:  KEQGNEYFKQKKFKEAIDCYSRSIALSP-TAVAFANRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKGALEDAEFAQRLEPHNQE
        KE+GN+ FK+K +++AI  YS +I LS   A  ++NRA AYL++  F +AE+DCT+A+ LD + +KAY RR TAR+ LG  KGA+ED  +A  LEP+N+ 
Subjt:  KEQGNEYFKQKKFKEAIDCYSRSIALSP-TAVAFANRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARKELGKAKGALEDAEFAQRLEPHNQE

Query:  IKKQHAELR
               LR
Subjt:  IKKQHAELR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTATTTTTCGCTTTGGCCCAATCGGTTGGGATTTCCACGGCGAAAACTCCGACCGGCGAACGGCTCCGACTCCGAGGCATTGCTGGACGCTTCGAGAAGCTCTTTCG
AAGACCAGCTGCTACAATTTTCCATTTTCTCTTTCTCGTCTTTACTCTTCTTTTCTTCTGCTCTCCCATGGCCGATTCCTCCGGCAAGCACGGTCGCGATCAGCCTCTGG
ATTTCCAGGGATTTTTGAATGACTTGCAGGATTGGGAACTCTCCTCTAAGGGGAAAGACAAGAAACTGAAGCCACAGGCCATTAATAAAGAAAAGGAGGGTAGAAGGCAG
ACAGAAAAAGCTTCAGCAGCTGACTACTTGAAGCACTACGATGCAGTTAACCGCCTATCAAGAAATTTTCAGACTGAACAGAGTTTTGTGGATGCGGCTTCAGAGAAAGA
ACAGGGTAATGAGTACTTTAAGCAAAAGAAGTTCAAAGAAGCTATTGACTGCTATTCAAGAAGTATTGCTTTGTCACCAACAGCGGTAGCCTTTGCAAATAGGGCCATGG
CCTACCTAAAAATCAGAAGATTTCAGGAGGCTGAGGATGACTGTACAGAGGCCTTAAATTTAGATGATCGATATATTAAAGCATACTCACGTCGAGCAACAGCTAGGAAG
GAACTCGGGAAGGCTAAAGGAGCCTTGGAGGATGCTGAATTTGCCCAGAGATTGGAGCCTCACAACCAAGAGATCAAGAAGCAACATGCTGAGCTCAGAGCTATTGTTGG
GAAAGCAATTTTTGAGAAGGCAGCTGATGCTTCAAGAAGGTCTACAAAAGATAAGGAGATAGTTGGAAAGTCTGACTCTAAAGCAAAAAGTCAGGACGTCCCTCCTGTCT
CTAGCAGCACACCAAGGACAGGATTATCGGCAGCTCAAGAACGCATTGAAGTAAAGGAAATTGGTGGGGAAAATGCTGTCAAGGCATCAGTACGTATCGAAGAAAATGAG
GACAGAAGTACAGGAGCTGAAATCACATACAAAAGAGTAGCAACAAATGGTTTTCACAAAGACTCAAGTTCATATTCGGGGGCATTGGAGAGAGATCATGTTCCAAGAAA
GCAGGAACTGAAGCCGTCAGTGCAGGAACTTGCTTCTCGAGCAGCTTCTAGAAGCATGGTTGAAGCTGCAAAAAACATTATAGCCCCGACTACTGCCTATCAATTTGAAG
TTTCTTGGCGAGGATTCTCTGGTGATCGTGCACTGCAGGCGCGTCTTTTAAAGGCCATCTCTCCAGACAAATTGCCCCAGATATTCAAAAATGCATTAACAGCTCCAATT
TTAACAGACATTGTCAAGTGTGTGGCTACGTTTTTCACTGAAGAGCCGGCTTTGGCTATCAGTTCTTTAGAAAATTTAGCCAAGGTCCCAAGATTCAGCATACTCATGAT
GTGTCTTCCATCCTCTGAAAAGTTTGATCTCCTCAAGATTTGGGATGAAGTATTTTGTGATGAGGCTGTTCCAATTGAGTACGCAGAAATGCTCGACAGCTTGCGTTCGA
AGTACTTTCCTAAACAATGA
mRNA sequenceShow/hide mRNA sequence
GAATTTCGTTAACTAAACTTGTCAAAAAGAAGTCCAAAACGTTCCATTTTTGTGGGCTATGTTATTTTTCGCTTTGGCCCAATCGGTTGGGATTTCCACGGCGAAAACTC
CGACCGGCGAACGGCTCCGACTCCGAGGCATTGCTGGACGCTTCGAGAAGCTCTTTCGAAGACCAGCTGCTACAATTTTCCATTTTCTCTTTCTCGTCTTTACTCTTCTT
TTCTTCTGCTCTCCCATGGCCGATTCCTCCGGCAAGCACGGTCGCGATCAGCCTCTGGATTTCCAGGGATTTTTGAATGACTTGCAGGATTGGGAACTCTCCTCTAAGGG
GAAAGACAAGAAACTGAAGCCACAGGCCATTAATAAAGAAAAGGAGGGTAGAAGGCAGACAGAAAAAGCTTCAGCAGCTGACTACTTGAAGCACTACGATGCAGTTAACC
GCCTATCAAGAAATTTTCAGACTGAACAGAGTTTTGTGGATGCGGCTTCAGAGAAAGAACAGGGTAATGAGTACTTTAAGCAAAAGAAGTTCAAAGAAGCTATTGACTGC
TATTCAAGAAGTATTGCTTTGTCACCAACAGCGGTAGCCTTTGCAAATAGGGCCATGGCCTACCTAAAAATCAGAAGATTTCAGGAGGCTGAGGATGACTGTACAGAGGC
CTTAAATTTAGATGATCGATATATTAAAGCATACTCACGTCGAGCAACAGCTAGGAAGGAACTCGGGAAGGCTAAAGGAGCCTTGGAGGATGCTGAATTTGCCCAGAGAT
TGGAGCCTCACAACCAAGAGATCAAGAAGCAACATGCTGAGCTCAGAGCTATTGTTGGGAAAGCAATTTTTGAGAAGGCAGCTGATGCTTCAAGAAGGTCTACAAAAGAT
AAGGAGATAGTTGGAAAGTCTGACTCTAAAGCAAAAAGTCAGGACGTCCCTCCTGTCTCTAGCAGCACACCAAGGACAGGATTATCGGCAGCTCAAGAACGCATTGAAGT
AAAGGAAATTGGTGGGGAAAATGCTGTCAAGGCATCAGTACGTATCGAAGAAAATGAGGACAGAAGTACAGGAGCTGAAATCACATACAAAAGAGTAGCAACAAATGGTT
TTCACAAAGACTCAAGTTCATATTCGGGGGCATTGGAGAGAGATCATGTTCCAAGAAAGCAGGAACTGAAGCCGTCAGTGCAGGAACTTGCTTCTCGAGCAGCTTCTAGA
AGCATGGTTGAAGCTGCAAAAAACATTATAGCCCCGACTACTGCCTATCAATTTGAAGTTTCTTGGCGAGGATTCTCTGGTGATCGTGCACTGCAGGCGCGTCTTTTAAA
GGCCATCTCTCCAGACAAATTGCCCCAGATATTCAAAAATGCATTAACAGCTCCAATTTTAACAGACATTGTCAAGTGTGTGGCTACGTTTTTCACTGAAGAGCCGGCTT
TGGCTATCAGTTCTTTAGAAAATTTAGCCAAGGTCCCAAGATTCAGCATACTCATGATGTGTCTTCCATCCTCTGAAAAGTTTGATCTCCTCAAGATTTGGGATGAAGTA
TTTTGTGATGAGGCTGTTCCAATTGAGTACGCAGAAATGCTCGACAGCTTGCGTTCGAAGTACTTTCCTAAACAATGACAGACGTTTCTTTATTGAGAAGAAGCACTTTA
TCTTCAAACTCTGCCTCTCTTAAGCTAACCCAGCTGCTTATCTTTAGTGTAAAGTATCCAATTATTCTGTTTTTGGGATCATAATTTGGCATGTTGACATATCTAACTCA
CGCAATGAAGTTAAATGTTATAAAAAGTGCCTTCTTTTCTATTACCTCTCTCCCACATGCTAGAAAATTATCAGAATTTGCTCGATGAAAGTCTCGGGCTCGAATTCTCA
ACGACGTTTCCGAACTTGATGAACATAAAAGTTTTCATCACAAGAAGAATAAGGTAACTTGTTTCTACAATTAGTGTACCGATTTTATTTAATTTGTTCTATAGGCTGTA
CACCTCCGTCTTTAGACTTCTAAGATAGTATATTGACCCATAGGTAGTAGGGTCCTTGGAAAGGGCTCAGTTTCCCTATGATGTGTGTTGTTTTAGTGCACTGCCACATG
CAGGAGGATAATTGAATGGTCCTTTCTACCCTAGTGGACCATCCTCGACTCAAGTCTTTATGTGAATGTGTAGGATATGTAATTTTCATTGGTGCTTAAGATATGCTGTT
GCATCATAATCTAGTTGGGGTCCAGAGTTTAAAATGGCCTTAGACAAATCATATGCTCCATTTTACAGTCTTTGATTTATGGGTGTTCTACGTTGCTGTC
Protein sequenceShow/hide protein sequence
MLFFALAQSVGISTAKTPTGERLRLRGIAGRFEKLFRRPAATIFHFLFLVFTLLFFCSPMADSSGKHGRDQPLDFQGFLNDLQDWELSSKGKDKKLKPQAINKEKEGRRQ
TEKASAADYLKHYDAVNRLSRNFQTEQSFVDAASEKEQGNEYFKQKKFKEAIDCYSRSIALSPTAVAFANRAMAYLKIRRFQEAEDDCTEALNLDDRYIKAYSRRATARK
ELGKAKGALEDAEFAQRLEPHNQEIKKQHAELRAIVGKAIFEKAADASRRSTKDKEIVGKSDSKAKSQDVPPVSSSTPRTGLSAAQERIEVKEIGGENAVKASVRIEENE
DRSTGAEITYKRVATNGFHKDSSSYSGALERDHVPRKQELKPSVQELASRAASRSMVEAAKNIIAPTTAYQFEVSWRGFSGDRALQARLLKAISPDKLPQIFKNALTAPI
LTDIVKCVATFFTEEPALAISSLENLAKVPRFSILMMCLPSSEKFDLLKIWDEVFCDEAVPIEYAEMLDSLRSKYFPKQ