CuGenDBv2

Gene ID	Clc02G15980
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	Antigenic heat-stable 120 kDa protein
Genome location	ClcChr02:28499088..28502090
RNA-Seq Expression	Clc02G15980
Synteny	Clc02G15980
Gene Ontology terms	GO:0006415 - translational termination (biological process) GO:0005737 - cytoplasm (cellular component) GO:0016149 - translation release factor activity, codon specific (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004144753.1 uncharacterized protein LOC101204620 [Cucumis sativus]

4.6e-89

93.62

Show/hide

Query:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNNGLGKEI
        MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNNGLGKEI
Subjt:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNNGLGKEI

Query:  NDTVEKVFCRLSGKEPPLFPPQNGDMPSVKETENEKGKGKEPEDDYHKEKSHSVRKRSFNDMNGKEENTVADGAGENVPVPEEHSRSP
        NDTVEKVFCRLSGKEPPLF PQNGDMP VKETE+EKGKGKEPED+YHKEKS  +RKRSFNDMNGKEE+T+ADGAGE++ VPEEHSRSP
Subjt:  NDTVEKVFCRLSGKEPPLFPPQNGDMPSVKETENEKGKGKEPEDDYHKEKSHSVRKRSFNDMNGKEENTVADGAGENVPVPEEHSRSP

XP_008453632.1 PREDICTED: uncharacterized protein LOC103494285 [Cucumis melo]

4.6e-89

94.68

Show/hide

Query:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNNGLGKEI
        MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNNGLGKEI
Subjt:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNNGLGKEI

Query:  NDTVEKVFCRLSGKEPPLFPPQNGDMPSVKETENEKGKGKEPEDDYHKEKSHSVRKRSFNDMNGKEENTVADGAGENVPVPEEHSRSP
        NDTVEKVFCRLSGKEPPLF PQNGDMP VKETE EKGKGKEPED+YHKEKS  VRKRSFNDMNGKEEN VADGAGE++ VPEEHSRSP
Subjt:  NDTVEKVFCRLSGKEPPLFPPQNGDMPSVKETENEKGKGKEPEDDYHKEKSHSVRKRSFNDMNGKEENTVADGAGENVPVPEEHSRSP

XP_022156356.1 uncharacterized protein LOC111023270 [Momordica charantia]

6.6e-88

92.55

Show/hide

Query:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNNGLGKEI
        MSSSS+ITPEDVL+SLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFD+LRQELEAPVLEKASKSVWELILDNNGLGKEI
Subjt:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNNGLGKEI

Query:  NDTVEKVFCRLSGKEPPLFPPQNGDMPSVKETENEKGKGKEPEDDYHKEKSHSVRKRSFNDMNGKEENTVADGAGENVPVPEEHSRSP
        NDTVEKVFCRLSG+EPPLFPPQNGDM SVKE ENEKGKGKEPEDDY KEKSHSVRKRSFNDMNG+EEN VA+GAGEN+ +PEE SRSP
Subjt:  NDTVEKVFCRLSGKEPPLFPPQNGDMPSVKETENEKGKGKEPEDDYHKEKSHSVRKRSFNDMNGKEENTVADGAGENVPVPEEHSRSP

XP_022938214.1 uncharacterized protein LOC111444361 [Cucurbita moschata]

6.6e-88

92.55

Show/hide

Query:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNNGLGKEI
        MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDN GLGKEI
Subjt:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNNGLGKEI

Query:  NDTVEKVFCRLSGKEPPLFPPQNGDMPSVKETENEKGKGKEPEDDYHKEKSHSVRKRSFNDMNGKEENTVADGAGENVPVPEEHSRSP
        NDTVEKVFCRLSGKEPPLFPP+NGD+PSVKETEN+KGKGKEPEDDYHKEKS  VRKRSF DMNGK+EN V DGAGEN+   EEHSRSP
Subjt:  NDTVEKVFCRLSGKEPPLFPPQNGDMPSVKETENEKGKGKEPEDDYHKEKSHSVRKRSFNDMNGKEENTVADGAGENVPVPEEHSRSP

XP_038890481.1 uncharacterized protein LOC120080024 isoform X1 [Benincasa hispida]

4.4e-92

95.74

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Query:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNNGLGKEI
        M SSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNNGLGKEI
Subjt:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNNGLGKEI

Query:  NDTVEKVFCRLSGKEPPLFPPQNGDMPSVKETENEKGKGKEPEDDYHKEKSHSVRKRSFNDMNGKEENTVADGAGENVPVPEEHSRSP
        NDTVEKVFCRLSGKEPPLFPPQNGDMPSVKETENEKGKGKEPED+YHKEKSH +RKRSFNDMNGKEEN VADGAGE++ VPEEHSRSP
Subjt:  NDTVEKVFCRLSGKEPPLFPPQNGDMPSVKETENEKGKGKEPEDDYHKEKSHSVRKRSFNDMNGKEENTVADGAGENVPVPEEHSRSP

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LGM0 Uncharacterized protein

2.2e-89

93.62

Show/hide

Query:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNNGLGKEI
        MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNNGLGKEI
Subjt:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNNGLGKEI

Query:  NDTVEKVFCRLSGKEPPLFPPQNGDMPSVKETENEKGKGKEPEDDYHKEKSHSVRKRSFNDMNGKEENTVADGAGENVPVPEEHSRSP
        NDTVEKVFCRLSGKEPPLF PQNGDMP VKETE+EKGKGKEPED+YHKEKS  +RKRSFNDMNGKEE+T+ADGAGE++ VPEEHSRSP
Subjt:  NDTVEKVFCRLSGKEPPLFPPQNGDMPSVKETENEKGKGKEPEDDYHKEKSHSVRKRSFNDMNGKEENTVADGAGENVPVPEEHSRSP

A0A1S3BWQ6 uncharacterized protein LOC103494285

2.2e-89

94.68

Show/hide

Query:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNNGLGKEI
        MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNNGLGKEI
Subjt:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNNGLGKEI

Query:  NDTVEKVFCRLSGKEPPLFPPQNGDMPSVKETENEKGKGKEPEDDYHKEKSHSVRKRSFNDMNGKEENTVADGAGENVPVPEEHSRSP
        NDTVEKVFCRLSGKEPPLF PQNGDMP VKETE EKGKGKEPED+YHKEKS  VRKRSFNDMNGKEEN VADGAGE++ VPEEHSRSP
Subjt:  NDTVEKVFCRLSGKEPPLFPPQNGDMPSVKETENEKGKGKEPEDDYHKEKSHSVRKRSFNDMNGKEENTVADGAGENVPVPEEHSRSP

A0A5D3BAZ9 Uncharacterized protein

2.2e-89

94.68

Show/hide

Query:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNNGLGKEI
        MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNNGLGKEI
Subjt:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNNGLGKEI

Query:  NDTVEKVFCRLSGKEPPLFPPQNGDMPSVKETENEKGKGKEPEDDYHKEKSHSVRKRSFNDMNGKEENTVADGAGENVPVPEEHSRSP
        NDTVEKVFCRLSGKEPPLF PQNGDMP VKETE EKGKGKEPED+YHKEKS  VRKRSFNDMNGKEEN VADGAGE++ VPEEHSRSP
Subjt:  NDTVEKVFCRLSGKEPPLFPPQNGDMPSVKETENEKGKGKEPEDDYHKEKSHSVRKRSFNDMNGKEENTVADGAGENVPVPEEHSRSP

A0A6J1DQE8 uncharacterized protein LOC111023270

3.2e-88

92.55

Show/hide

Query:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNNGLGKEI
        MSSSS+ITPEDVL+SLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFD+LRQELEAPVLEKASKSVWELILDNNGLGKEI
Subjt:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNNGLGKEI

Query:  NDTVEKVFCRLSGKEPPLFPPQNGDMPSVKETENEKGKGKEPEDDYHKEKSHSVRKRSFNDMNGKEENTVADGAGENVPVPEEHSRSP
        NDTVEKVFCRLSG+EPPLFPPQNGDM SVKE ENEKGKGKEPEDDY KEKSHSVRKRSFNDMNG+EEN VA+GAGEN+ +PEE SRSP
Subjt:  NDTVEKVFCRLSGKEPPLFPPQNGDMPSVKETENEKGKGKEPEDDYHKEKSHSVRKRSFNDMNGKEENTVADGAGENVPVPEEHSRSP

A0A6J1FDE9 uncharacterized protein LOC111444361

3.2e-88

92.55

Show/hide

Query:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNNGLGKEI
        MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDN GLGKEI
Subjt:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNNGLGKEI

Query:  NDTVEKVFCRLSGKEPPLFPPQNGDMPSVKETENEKGKGKEPEDDYHKEKSHSVRKRSFNDMNGKEENTVADGAGENVPVPEEHSRSP
        NDTVEKVFCRLSGKEPPLFPP+NGD+PSVKETEN+KGKGKEPEDDYHKEKS  VRKRSF DMNGK+EN V DGAGEN+   EEHSRSP
Subjt:  NDTVEKVFCRLSGKEPPLFPPQNGDMPSVKETENEKGKGKEPEDDYHKEKSHSVRKRSFNDMNGKEENTVADGAGENVPVPEEHSRSP

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G12530.1 unknown protein

6.7e-14

31.44

Show/hide

Query:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNNGLGKEI
        M  +  I+ E+V+E L +DG  D LRLKII +LK NE+L+N  I +V++S  L   GA+    R+L DA+ +E+ + +L + S  +W +I   +G+  EI
Subjt:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNNGLGKEI

Query:  NDTVEKVFCRLSGKEPPLFPPQNGDMPSVKETENE-KGKGKEPEDDYH----KEKSHSVRKRSFNDMNGKE-ENTVADGAGENVPVPEEHSRSP
         +TV+ V+  LS       P       S +E E++     KE   D++     ++   + K +  D  G+   + V D  GE     EE    P
Subjt:  NDTVEKVFCRLSGKEPPLFPPQNGDMPSVKETENE-KGKGKEPEDDYH----KEKSHSVRKRSFNDMNGKE-ENTVADGAGENVPVPEEHSRSP

AT1G56420.1 unknown protein

1.4e-51

67.47

Show/hide

Query:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNNGLGKEI
        MSSSSVI PEDVLE LMNDGTID+LRL+IINQLKANEELK+TTIKM E+SKVLNTPGAEKQTKRELFDALRQELE PVLEKASKSVW+LI++ +GLGKEI
Subjt:  MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNNGLGKEI

Query:  NDTVEKVFCRLSGKEPPLFPPQNGDMPSVKETENEKGKGKEPEDDYHKEKSHSVRKRSFNDMNGKE
        N+TVE+VFC LSG+EPP +   N     V++T  E  K  E +D          +KRS +++N  E
Subjt:  NDTVEKVFCRLSGKEPPLFPPQNGDMPSVKETENEKGKGKEPEDDYHKEKSHSVRKRSFNDMNGKE

Sequences

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CDS sequence

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ATGAGTTCGTCTTCAGTAATAACTCCAGAAGACGTGCTGGAGTCGCTGATGAATGATGGTACTATCGATTCCCTCAGGTTGAAGATCATTAACCAGCTCAAAGCCAATGA
GGAGCTTAAGAATACCACCATTAAAATGGTAGAACAAAGCAAAGTCCTCAATACTCCTGGGGCAGAGAAACAGACCAAAAGGGAGCTATTTGATGCCCTTCGGCAGGAAC
TCGAAGCACCAGTGCTTGAGAAAGCCTCTAAATCTGTTTGGGAATTAATTTTGGACAACAATGGATTGGGTAAGGAAATAAACGACACAGTCGAAAAAGTATTTTGTCGA
TTGAGTGGCAAAGAACCTCCATTGTTTCCTCCTCAAAATGGGGATATGCCATCAGTAAAAGAAACTGAGAACGAGAAAGGCAAGGGAAAAGAACCTGAAGATGATTATCA
CAAGGAGAAATCACACTCTGTTAGGAAAAGGAGTTTCAATGACATGAATGGCAAAGAGGAAAACACTGTTGCAGATGGAGCTGGAGAAAATGTACCTGTACCTGAAGAAC
ATAGTAGGTCCCCTTAG

mRNA sequence

Show/hide mRNA sequence

AAATAATTCTCCAATCTCCACCCTTACGCCGGAGCATAAGTACATACATATCTTTGAGAACCCGAGTTAGAAGAAAGAAGAAACTCTCATCGGAATAAACGAACGAGCAG
GTGCGAAAGATCTGTTAGATTCTGAAATCACATTGAAATAACCCATTTACTTCAACCATTTAGAACACTTCTTGAGGAGAACAGAATTTGAAGGGAAAGATTCATGAGTT
CGTCTTCAGTAATAACTCCAGAAGACGTGCTGGAGTCGCTGATGAATGATGGTACTATCGATTCCCTCAGGTTGAAGATCATTAACCAGCTCAAAGCCAATGAGGAGCTT
AAGAATACCACCATTAAAATGGTAGAACAAAGCAAAGTCCTCAATACTCCTGGGGCAGAGAAACAGACCAAAAGGGAGCTATTTGATGCCCTTCGGCAGGAACTCGAAGC
ACCAGTGCTTGAGAAAGCCTCTAAATCTGTTTGGGAATTAATTTTGGACAACAATGGATTGGGTAAGGAAATAAACGACACAGTCGAAAAAGTATTTTGTCGATTGAGTG
GCAAAGAACCTCCATTGTTTCCTCCTCAAAATGGGGATATGCCATCAGTAAAAGAAACTGAGAACGAGAAAGGCAAGGGAAAAGAACCTGAAGATGATTATCACAAGGAG
AAATCACACTCTGTTAGGAAAAGGAGTTTCAATGACATGAATGGCAAAGAGGAAAACACTGTTGCAGATGGAGCTGGAGAAAATGTACCTGTACCTGAAGAACATAGTAG
GTCCCCTTAGTTGAGTTTGAAGACATAAACATGTCATGAACTGTGGTCTATGAGGACAGATGTCGCAGGTGTAGAATGTGATCATTGGATCAAGCTCTTTCAACTTAATC
TGATGAGCATGGCCTGTGTCGAACACACGAAATTTGACACTATGCATACCGCACACGCAATTGATTGGAGTCCAAAAGTTTGTTTGTGTGGATGTAGATGAACATTTCTA
TGATCTTTAATGTTCCCCTTAACTTTATGGTTAGGAAATAGGGTGGTTAGTCGTAAAAGACGAGCTTTTGTAATCTAATCTATCTACCCATGTCAATGCTGTGAAAAGCA
ATATAAATGGTGATTGGCCTTGTTGTGCAGTACTAGAAGACTATATAGATGAAGTTTTCAAGAATTTTCTTTGTTCCTTTCTGGAGTGTTGTGTGCTACTCTGCTTTGTG
TTGAACTAGATTTGAATTCTAGATTCTAAGTTCAGTTTATAGGTGAAGAGGCAAATTTTAATTTGAGTCAGGTGCCTTGTGCAAGCTCTACACTAAATGCCATTATTT

Protein sequence

Show/hide protein sequence

MSSSSVITPEDVLESLMNDGTIDSLRLKIINQLKANEELKNTTIKMVEQSKVLNTPGAEKQTKRELFDALRQELEAPVLEKASKSVWELILDNNGLGKEINDTVEKVFCR
LSGKEPPLFPPQNGDMPSVKETENEKGKGKEPEDDYHKEKSHSVRKRSFNDMNGKEENTVADGAGENVPVPEEHSRSP

Clc02G15980 (gene) of Watermelon (cordophanus) v2 genome