; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc02G16320 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G16320
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionExocyst subunit Exo70 family protein
Genome locationClcChr02:28801632..28807285
RNA-Seq ExpressionClc02G16320
SyntenyClc02G16320
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PLY84773.1 hypothetical protein LSAT_5X110740 [Lactuca sativa]7.3e-0448.33Show/hide
Query:  PVPADAKLTPVFTSSFDSLGSKNGGTNSFIPNLEATISGMSFPSLNLPVLTWPGKFLPYG
        P P + K TPV  S  + L  +NGGT  FIP+ +A  S  SFP  N PV  +PGK  PYG
Subjt:  PVPADAKLTPVFTSSFDSLGSKNGGTNSFIPNLEATISGMSFPSLNLPVLTWPGKFLPYG
THG20953.1 hypothetical protein TEA_006628 [Camellia sinensis var. sinensis]3.2e-0764.29Show/hide
Query:  VRSSKPVPADAKLTPVFTSSFDSLGSKNGGTNSFIPNLEATISGMSFPSLNLPVLT
        V SS   PADAKLTPV +SS D  GS+NGGT S IPN+ AT SG SFP  N PV T
Subjt:  VRSSKPVPADAKLTPVFTSSFDSLGSKNGGTNSFIPNLEATISGMSFPSLNLPVLT
TrEMBL top hitse value%identityAlignment
A0A0D3EVR7 Exocyst subunit Exo70 family protein2.9e-0652.11Show/hide
Query:  GMTLDIMAVRSSKPVPADAKLTPVFTSSFDSLGSKNGGTNSFIPNLEATISGMSFPSLNLPVLTWPGKFLP
        G  LD   V SS P PADAK TPV  S  D   S+NGG NS   +     SG S P  NLPV   PGKFLP
Subjt:  GMTLDIMAVRSSKPVPADAKLTPVFTSSFDSLGSKNGGTNSFIPNLEATISGMSFPSLNLPVLTWPGKFLP
A0A0D3EVR9 Exocyst subunit Exo70 family protein2.9e-0652.11Show/hide
Query:  GMTLDIMAVRSSKPVPADAKLTPVFTSSFDSLGSKNGGTNSFIPNLEATISGMSFPSLNLPVLTWPGKFLP
        G  LD   V SS P PADAK TPV  S  D   S+NGG NS   +     SG S P  NLPV   PGKFLP
Subjt:  GMTLDIMAVRSSKPVPADAKLTPVFTSSFDSLGSKNGGTNSFIPNLEATISGMSFPSLNLPVLTWPGKFLP
A0A0E0N4E7 Exocyst subunit Exo70 family protein2.9e-0652.11Show/hide
Query:  GMTLDIMAVRSSKPVPADAKLTPVFTSSFDSLGSKNGGTNSFIPNLEATISGMSFPSLNLPVLTWPGKFLP
        G  LD   V SS P PADAK TPV  S  D   S+NGG NS   +     SG S P  NLPV   PGKFLP
Subjt:  GMTLDIMAVRSSKPVPADAKLTPVFTSSFDSLGSKNGGTNSFIPNLEATISGMSFPSLNLPVLTWPGKFLP
A0A0E0N4F1 Exocyst subunit Exo70 family protein2.9e-0652.11Show/hide
Query:  GMTLDIMAVRSSKPVPADAKLTPVFTSSFDSLGSKNGGTNSFIPNLEATISGMSFPSLNLPVLTWPGKFLP
        G  LD   V SS P PADAK TPV  S  D   S+NGG NS   +     SG S P  NLPV   PGKFLP
Subjt:  GMTLDIMAVRSSKPVPADAKLTPVFTSSFDSLGSKNGGTNSFIPNLEATISGMSFPSLNLPVLTWPGKFLP
A0A4S4EVH4 Uncharacterized protein1.5e-0764.29Show/hide
Query:  VRSSKPVPADAKLTPVFTSSFDSLGSKNGGTNSFIPNLEATISGMSFPSLNLPVLT
        V SS   PADAKLTPV +SS D  GS+NGGT S IPN+ AT SG SFP  N PV T
Subjt:  VRSSKPVPADAKLTPVFTSSFDSLGSKNGGTNSFIPNLEATISGMSFPSLNLPVLT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGAGTTATTGAATTACACAGAGGCCCTGCTTCATTCAACCCACTTCCACAGCAACCTTTATCGGTACGCTCAAAACCTGTTCGACGAAATGCCCCAAGAAAATTT
TAGTTCAGAATGGCTCTCAAAACTGCATTTCCCCTTACATGTTTACTGCATTAGATTCAATTTTAAGTACCACCGACTCAGACTTACCATATTTCTTAGGATTATTGAGC
ATGTCGTTAATGGGGGTGTAGATTCTGTTGAATGGGAAGACAACCAATTGGAGGGAGGCCAGCGACCACCATATTGCGACATCCAAGCCGGAATGACTCTAGATATAATG
GCTGTCAGATCATCAAAGCCGGTGCCAGCCGATGCAAAACTAACCCCCGTTTTCACATCATCATTCGACAGTTTAGGATCCAAAAATGGAGGAACAAACTCCTTTATCCC
TAACCTAGAGGCCACCATATCAGGAATGAGTTTTCCATCACTGAACCTTCCAGTACTAACATGGCCAGGAAAATTTTTGCCATATGGAAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGGAGTTATTGAATTACACAGAGGCCCTGCTTCATTCAACCCACTTCCACAGCAACCTTTATCGGTACGCTCAAAACCTGTTCGACGAAATGCCCCAAGAAAATTT
TAGTTCAGAATGGCTCTCAAAACTGCATTTCCCCTTACATGTTTACTGCATTAGATTCAATTTTAAGTACCACCGACTCAGACTTACCATATTTCTTAGGATTATTGAGC
ATGTCGTTAATGGGGGTGTAGATTCTGTTGAATGGGAAGACAACCAATTGGAGGGAGGCCAGCGACCACCATATTGCGACATCCAAGCCGGAATGACTCTAGATATAATG
GCTGTCAGATCATCAAAGCCGGTGCCAGCCGATGCAAAACTAACCCCCGTTTTCACATCATCATTCGACAGTTTAGGATCCAAAAATGGAGGAACAAACTCCTTTATCCC
TAACCTAGAGGCCACCATATCAGGAATGAGTTTTCCATCACTGAACCTTCCAGTACTAACATGGCCAGGAAAATTTTTGCCATATGGAAAGTAATTGGCCTTGAAAATGG
TGGAAATGAAGTTGTTATTTCCAGTATCCACCGTAGAATCACCAAATATGAGAATGGCGGGAAACGACCGTGGAATTTTAGGCTTTAAAGCACTGCCTGGTTTGCTAAGA
AATAGCAGCCAAATTATGTGGAATGATAGAGCTGCAATGAGGTATGGTCTAGACCATAAATATGAAATATCACAAGATCTATCAGTAGAAACATGTTTGAACAGGCAATC
ACGTCCTTTCCCTATTACAACTATCCGGGTTGAAGTGGTATTGTCGTGTATGAGTGTGATGGAAATCATAGATATGAAAAATCATGATCCAACAATAGAGATATGCTTGA
ATAAATAGTCACATCCTTTGCCACGTTACAATCCATGGTGGTCACCTACCTAGGATTTAATATCTTACAAGTTTTTTTGACACCCAAATGTTGTAAGGTTAAGCGGGTTG
TCCCGTAAGATTAGTCGAAGTGCACGTAAGCTGGTTCGAACACTCACGGATGTATATAAAAAAAAAGAATAATAAATAATCACGTCCTTTACCACGTTACAACTATTCAA
GTTGAAGTGGTATATCTCATGTATGGGTATGATTAGACCATTGATATGAAACATGAATATCTAATGGTGGAGATGTATGTGAACAGACAATCAAGTCTTTTACTTTTTAA
ATTTTCATAAATCCATATTTCGTCTTTTCATTTCAAATGGTTACAACTATAAGAGTAAAA
Protein sequenceShow/hide protein sequence
MLELLNYTEALLHSTHFHSNLYRYAQNLFDEMPQENFSSEWLSKLHFPLHVYCIRFNFKYHRLRLTIFLRIIEHVVNGGVDSVEWEDNQLEGGQRPPYCDIQAGMTLDIM
AVRSSKPVPADAKLTPVFTSSFDSLGSKNGGTNSFIPNLEATISGMSFPSLNLPVLTWPGKFLPYGK