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Clc02G16510 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G16510
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr02:28968709..28970706
RNA-Seq ExpressionClc02G16510
SyntenyClc02G16510
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048017.1 hypothetical protein E6C27_scaffold385G00850 [Cucumis melo var. makuwa]7.1e-2780Show/hide
Query:  MASFVSLSFSVPQSIIKEIPPRKLAKVTVVSCRAGTASKLMLSCCSNKSISLSWESCHPVRLTSRPFWGIVSSSSRNMVLLAGYW
        MASFVSLSFSVPQ  +KEIPP KLAK TVVS RAGTASKL+L C S KSIS++WE+   VRLTSRPFWGIVSSSSRNMVLL GYW
Subjt:  MASFVSLSFSVPQSIIKEIPPRKLAKVTVVSCRAGTASKLMLSCCSNKSISLSWESCHPVRLTSRPFWGIVSSSSRNMVLLAGYW
XP_022946526.1 uncharacterized protein LOC111450562 [Cucurbita moschata]2.9e-2883.53Show/hide
Query:  MASFVSLSFSVPQSIIKEIPPRKLAKVTVVSCRAGTASKLMLSCCSNKSISLSWESCHPVRLTSRPFWGIVSSSSRNMVLLAGYW
        MASFVSLSFSVPQ I KE+PP KLAKVTVV  RAGTASK +LSCC+NKSIS +WE+CHPVRLTSRPFWGIVSSSSRN+V LAGYW
Subjt:  MASFVSLSFSVPQSIIKEIPPRKLAKVTVVSCRAGTASKLMLSCCSNKSISLSWESCHPVRLTSRPFWGIVSSSSRNMVLLAGYW
XP_022999037.1 uncharacterized protein LOC111493548 [Cucurbita maxima]5.8e-2983.53Show/hide
Query:  MASFVSLSFSVPQSIIKEIPPRKLAKVTVVSCRAGTASKLMLSCCSNKSISLSWESCHPVRLTSRPFWGIVSSSSRNMVLLAGYW
        MASFVSLSFSVPQ I KE+PP KLAKVTVV  RAGTASK +LSCCSNKSIS++WE+C PVRLTSRPFWGIVSSSSRN+V LAGYW
Subjt:  MASFVSLSFSVPQSIIKEIPPRKLAKVTVVSCRAGTASKLMLSCCSNKSISLSWESCHPVRLTSRPFWGIVSSSSRNMVLLAGYW
XP_023545344.1 uncharacterized protein LOC111804783 isoform X1 [Cucurbita pepo subsp. pepo]1.5e-2983.53Show/hide
Query:  MASFVSLSFSVPQSIIKEIPPRKLAKVTVVSCRAGTASKLMLSCCSNKSISLSWESCHPVRLTSRPFWGIVSSSSRNMVLLAGYW
        MASFVSLSFSVPQ I KE+PP KLAKVTVV  RAGTAS  +LSCCSNKSIS++WE+CHPVRLTSRPFWGIVSSSSRN+V LAGYW
Subjt:  MASFVSLSFSVPQSIIKEIPPRKLAKVTVVSCRAGTASKLMLSCCSNKSISLSWESCHPVRLTSRPFWGIVSSSSRNMVLLAGYW
XP_038890542.1 uncharacterized protein LOC120080060 [Benincasa hispida]2.4e-3081.18Show/hide
Query:  MASFVSLSFSVPQSIIKEIPPRKLAKVTVVSCRAGTASKLMLSCCSNKSISLSWESCHPVRLTSRPFWGIVSSSSRNMVLLAGYW
        MA+FVSLSFSVPQ  +KEIPPRKL++VTVVS RAGTASKL+LSCCSN SIS++W++CHPVRLT RPFWGIVSSSSR MVLL+GYW
Subjt:  MASFVSLSFSVPQSIIKEIPPRKLAKVTVVSCRAGTASKLMLSCCSNKSISLSWESCHPVRLTSRPFWGIVSSSSRNMVLLAGYW
TrEMBL top hitse value%identityAlignment
A0A0A0LJQ7 Uncharacterized protein1.7e-2678.82Show/hide
Query:  MASFVSLSFSVPQSIIKEIPPRKLAKVTVVSCRAGTASKLMLSCCSNKSISLSWESCHPVRLTSRPFWGIVSSSSRNMVLLAGYW
        MASFVSLSFSVPQ  +KEIPPRKLAK T+VS RAGTASKL+L   S KSIS++WE+   VRLTSRPFWGIVSSSSRNMVLL GYW
Subjt:  MASFVSLSFSVPQSIIKEIPPRKLAKVTVVSCRAGTASKLMLSCCSNKSISLSWESCHPVRLTSRPFWGIVSSSSRNMVLLAGYW
A0A5A7U1B8 Uncharacterized protein3.4e-2780Show/hide
Query:  MASFVSLSFSVPQSIIKEIPPRKLAKVTVVSCRAGTASKLMLSCCSNKSISLSWESCHPVRLTSRPFWGIVSSSSRNMVLLAGYW
        MASFVSLSFSVPQ  +KEIPP KLAK TVVS RAGTASKL+L C S KSIS++WE+   VRLTSRPFWGIVSSSSRNMVLL GYW
Subjt:  MASFVSLSFSVPQSIIKEIPPRKLAKVTVVSCRAGTASKLMLSCCSNKSISLSWESCHPVRLTSRPFWGIVSSSSRNMVLLAGYW
A0A5D3CPK7 Uncharacterized protein1.7e-2678.82Show/hide
Query:  MASFVSLSFSVPQSIIKEIPPRKLAKVTVVSCRAGTASKLMLSCCSNKSISLSWESCHPVRLTSRPFWGIVSSSSRNMVLLAGYW
        MASFVSLSFSVPQ  +KEIPP KLAK TVVS RAGTA KL+L C S KSIS++WE+   VRLTSRPFWGIVSSSSRNMVLL GYW
Subjt:  MASFVSLSFSVPQSIIKEIPPRKLAKVTVVSCRAGTASKLMLSCCSNKSISLSWESCHPVRLTSRPFWGIVSSSSRNMVLLAGYW
A0A6J1G3X3 uncharacterized protein LOC1114505621.4e-2883.53Show/hide
Query:  MASFVSLSFSVPQSIIKEIPPRKLAKVTVVSCRAGTASKLMLSCCSNKSISLSWESCHPVRLTSRPFWGIVSSSSRNMVLLAGYW
        MASFVSLSFSVPQ I KE+PP KLAKVTVV  RAGTASK +LSCC+NKSIS +WE+CHPVRLTSRPFWGIVSSSSRN+V LAGYW
Subjt:  MASFVSLSFSVPQSIIKEIPPRKLAKVTVVSCRAGTASKLMLSCCSNKSISLSWESCHPVRLTSRPFWGIVSSSSRNMVLLAGYW
A0A6J1K9Q0 uncharacterized protein LOC1114935482.8e-2983.53Show/hide
Query:  MASFVSLSFSVPQSIIKEIPPRKLAKVTVVSCRAGTASKLMLSCCSNKSISLSWESCHPVRLTSRPFWGIVSSSSRNMVLLAGYW
        MASFVSLSFSVPQ I KE+PP KLAKVTVV  RAGTASK +LSCCSNKSIS++WE+C PVRLTSRPFWGIVSSSSRN+V LAGYW
Subjt:  MASFVSLSFSVPQSIIKEIPPRKLAKVTVVSCRAGTASKLMLSCCSNKSISLSWESCHPVRLTSRPFWGIVSSSSRNMVLLAGYW
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAGCTTCGTTTCTCTGAGCTTCTCCGTTCCACAGTCCATTATCAAGGAAATCCCACCACGGAAACTGGCTAAAGTTACGGTCGTTTCATGCCGAGCTGGAACAGC
TTCGAAGCTTATGCTATCCTGTTGCTCAAATAAATCCATATCACTGAGTTGGGAAAGTTGTCATCCTGTACGGTTAACTTCAAGACCTTTTTGGGGCATAGTTTCTTCTA
GTTCCAGGAATATGGTGTTATTAGCTGGCTACTGGTCTGCTGGCTTTATTATATATCCTTTGCCATTTGTTATACAGAAACAGATGGGAAATTGCCCGAGTTGCAAAATT
AGAGCTGCCAGCAACTCGGTGGACGACTACTGA
mRNA sequenceShow/hide mRNA sequence
CTGGAACCTGGAAGGGCCGGTTCGGCCCTTTTAAAAAGAGCAGCAGCGGCAAAGGCAAAACGGACCCAAAAAGCTTGGGGTTTCGTAATTTTGTATTGTTGCTTTCATGG
CGAGCTTCGTTTCTCTGAGCTTCTCCGTTCCACAGTCCATTATCAAGGAAATCCCACCACGGAAACTGGCTAAAGTTACGGTCGTTTCATGCCGAGCTGGAACAGCTTCG
AAGCTTATGCTATCCTGTTGCTCAAATAAATCCATATCACTGAGTTGGGAAAGTTGTCATCCTGTACGGTTAACTTCAAGACCTTTTTGGGGCATAGTTTCTTCTAGTTC
CAGGAATATGGTGTTATTAGCTGGCTACTGGTCTGCTGGCTTTATTATATATCCTTTGCCATTTGTTATACAGAAACAGATGGGAAATTGCCCGAGTTGCAAAATTAGAG
CTGCCAGCAACTCGGTGGACGACTACTGA
Protein sequenceShow/hide protein sequence
MASFVSLSFSVPQSIIKEIPPRKLAKVTVVSCRAGTASKLMLSCCSNKSISLSWESCHPVRLTSRPFWGIVSSSSRNMVLLAGYWSAGFIIYPLPFVIQKQMGNCPSCKI
RAASNSVDDY