CuGenDBv2

Gene ID	Clc02G16555
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	Lipoxygenase
Genome location	ClcChr02:29057319..29060961
RNA-Seq Expression	Clc02G16555
Synteny	Clc02G16555
Gene Ontology terms	GO:0006629 - lipid metabolic process (biological process) GO:0019752 - carboxylic acid metabolic process (biological process) GO:0005515 - protein binding (molecular function) GO:0016491 - oxidoreductase activity (molecular function)
InterPro domains	IPR036392 - PLAT/LH2 domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6599220.1 putative linoleate 9S-lipoxygenase 5, partial [Cucurbita argyrosperma subsp. sororia]

7.3e-20

59.81

Show/hide

Query:  DAFKTTDNALRTTGDVVGSVINARGSFMDR--------------KVIMMRSNVLDFTQLHSIVLDGFTELLGSGIVLQLVSATELN------YGK-RRAT
        DA KTT +ALRTTGDV GSV+NA G+ +DR              KVI+MRSNVLDF + HS VLDGFTE+LGSGIVLQLVSAT ++       GK  R  
Subjt:  DAFKTTDNALRTTGDVVGSVINARGSFMDR--------------KVIMMRSNVLDFTQLHSIVLDGFTELLGSGIVLQLVSATELN------YGK-RRAT

Query:  YLERWLT
        YLERWLT
Subjt:  YLERWLT

XP_022946174.1 probable linoleate 9S-lipoxygenase 5 [Cucurbita moschata]

3.3e-20

60.75

Show/hide

Query:  DAFKTTDNALRTTGDVVGSVINARGSFMDR--------------KVIMMRSNVLDFTQLHSIVLDGFTELLGSGIVLQLVSATELN------YGK-RRAT
        DA KTT +ALRTTGDV GSV+NA G+ +DR              KVI+MRSNVLDF + HS VLDGFTELLGSGIVLQLVSAT ++       GK  R  
Subjt:  DAFKTTDNALRTTGDVVGSVINARGSFMDR--------------KVIMMRSNVLDFTQLHSIVLDGFTELLGSGIVLQLVSATELN------YGK-RRAT

Query:  YLERWLT
        YLERWLT
Subjt:  YLERWLT

XP_022999017.1 probable linoleate 9S-lipoxygenase 5 [Cucurbita maxima]

3.3e-20

60.75

Show/hide

Query:  DAFKTTDNALRTTGDVVGSVINARGSFMDR--------------KVIMMRSNVLDFTQLHSIVLDGFTELLGSGIVLQLVSATELN------YGK-RRAT
        DA KTT +ALRTTGDV GSV+NA G+ +DR              KVI+MRSNVLDF + HS VLDGFTELLGSGIVLQLVSAT ++       GK  R  
Subjt:  DAFKTTDNALRTTGDVVGSVINARGSFMDR--------------KVIMMRSNVLDFTQLHSIVLDGFTELLGSGIVLQLVSATELN------YGK-RRAT

Query:  YLERWLT
        YLERWLT
Subjt:  YLERWLT

XP_023545238.1 probable linoleate 9S-lipoxygenase 5 [Cucurbita pepo subsp. pepo]

3.3e-20

60.75

Show/hide

Query:  DAFKTTDNALRTTGDVVGSVINARGSFMDR--------------KVIMMRSNVLDFTQLHSIVLDGFTELLGSGIVLQLVSATELN------YGK-RRAT
        DA KTT +ALRTTGDV GSV+NA G+ +DR              KVI+MRSNVLDF + HS VLDGFTELLGSGIVLQLVSAT ++       GK  R  
Subjt:  DAFKTTDNALRTTGDVVGSVINARGSFMDR--------------KVIMMRSNVLDFTQLHSIVLDGFTELLGSGIVLQLVSATELN------YGK-RRAT

Query:  YLERWLT
        YLERWLT
Subjt:  YLERWLT

XP_038890817.1 probable linoleate 9S-lipoxygenase 5 [Benincasa hispida]

7.8e-22

63.55

Show/hide

Query:  DAFKTTDNALRTTGDVVGSVINARGSFMDR--------------KVIMMRSNVLDFTQLHSIVLDGFTELLGSGIVLQLVSATELN------YGK-RRAT
        DA KTT +ALRTTGDV GSVINA G+F+DR              K+IMMR+NVLDFT+ HS VLDGFTELLGSGIVLQLVSATE++       GK  R  
Subjt:  DAFKTTDNALRTTGDVVGSVINARGSFMDR--------------KVIMMRSNVLDFTQLHSIVLDGFTELLGSGIVLQLVSATELN------YGK-RRAT

Query:  YLERWLT
        YLERWLT
Subjt:  YLERWLT

TrEMBL top hits

e value

%identity

Alignment

A0A1S4E045 probable linoleate 9S-lipoxygenase 5 isoform X2

1.8e-19

56.07

Show/hide

Query:  DAFKTTDNALRTTGDVVGSVINARGSFMDR--------------KVIMMRSNVLDFTQLHSIVLDGFTELLGSGIVLQLVSATELN------YGK-RRAT
        DA K T N LRTTGDV GS++NA G+F+DR              KVI++RSNVL+ T+ HS +LDGFTELLGSGIV+QLVSATE++       GK  R  
Subjt:  DAFKTTDNALRTTGDVVGSVINARGSFMDR--------------KVIMMRSNVLDFTQLHSIVLDGFTELLGSGIVLQLVSATELN------YGK-RRAT

Query:  YLERWLT
        YLE+WLT
Subjt:  YLERWLT

A0A6J1G308 Lipoxygenase

4.6e-20

57.66

Show/hide

Query:  DMFEDAFKTTDNALRTTGDVVGSVINARGSFMDR--------------KVIMMRSNVLDFTQLHSIVLDGFTELLGSGIVLQLVSATELN------YGK-
        ++  DA KTT + LRTTGDV GSV+NA G+ +DR              KVI+MRSNVLDFT+LHS VLDG TELLGSGIVL+LVSAT ++       GK 
Subjt:  DMFEDAFKTTDNALRTTGDVVGSVINARGSFMDR--------------KVIMMRSNVLDFTQLHSIVLDGFTELLGSGIVLQLVSATELN------YGK-

Query:  RRATYLERWLT
         R  YLERWLT
Subjt:  RRATYLERWLT

A0A6J1G320 Lipoxygenase

1.6e-20

60.75

Show/hide

Query:  DAFKTTDNALRTTGDVVGSVINARGSFMDR--------------KVIMMRSNVLDFTQLHSIVLDGFTELLGSGIVLQLVSATELN------YGK-RRAT
        DA KTT +ALRTTGDV GSV+NA G+ +DR              KVI+MRSNVLDF + HS VLDGFTELLGSGIVLQLVSAT ++       GK  R  
Subjt:  DAFKTTDNALRTTGDVVGSVINARGSFMDR--------------KVIMMRSNVLDFTQLHSIVLDGFTELLGSGIVLQLVSATELN------YGK-RRAT

Query:  YLERWLT
        YLERWLT
Subjt:  YLERWLT

A0A6J1G324 Lipoxygenase

4.6e-20

57.66

Show/hide

Query:  DMFEDAFKTTDNALRTTGDVVGSVINARGSFMDR--------------KVIMMRSNVLDFTQLHSIVLDGFTELLGSGIVLQLVSATELN------YGK-
        ++  DA KTT + LRTTGDV GSV+NA G+ +DR              KVI+MRSNVLDFT+LHS VLDG TELLGSGIVL+LVSAT ++       GK 
Subjt:  DMFEDAFKTTDNALRTTGDVVGSVINARGSFMDR--------------KVIMMRSNVLDFTQLHSIVLDGFTELLGSGIVLQLVSATELN------YGK-

Query:  RRATYLERWLT
         R  YLERWLT
Subjt:  RRATYLERWLT

A0A6J1K9N0 Lipoxygenase

1.6e-20

60.75

Show/hide

Query:  DAFKTTDNALRTTGDVVGSVINARGSFMDR--------------KVIMMRSNVLDFTQLHSIVLDGFTELLGSGIVLQLVSATELN------YGK-RRAT
        DA KTT +ALRTTGDV GSV+NA G+ +DR              KVI+MRSNVLDF + HS VLDGFTELLGSGIVLQLVSAT ++       GK  R  
Subjt:  DAFKTTDNALRTTGDVVGSVINARGSFMDR--------------KVIMMRSNVLDFTQLHSIVLDGFTELLGSGIVLQLVSATELN------YGK-RRAT

Query:  YLERWLT
        YLERWLT
Subjt:  YLERWLT

SwissProt top hits

e value

%identity

Alignment

P29250 Linoleate 9S-lipoxygenase 2

6.9e-05

32.91

Show/hide

Query:  GDVVGSVINARGSFMDRKVIMMRSNVLDFTQLHSIVLDGFTELLGSGIVLQLVSAT--ELNYGKR----RATYLERWLT
        G ++G +   + + +   +++MR N LD     + V+DG +E LG G+  QLVS++  + N G R        LE+WLT
Subjt:  GDVVGSVINARGSFMDRKVIMMRSNVLDFTQLHSIVLDGFTELLGSGIVLQLVSAT--ELNYGKR----RATYLERWLT

P38416 Linoleate 9S-lipoxygenase B

1.5e-04

44.26

Show/hide

Query:  KVIMMRSNVLDFTQLHSIVLDGFTELLGSGIVLQLVSATELNY----GK-RRATYLERWLT
        +VI+M+ NVLDF  + + V+DG ++LLG  + +QL+S + +NY    GK     YLE WLT
Subjt:  KVIMMRSNVLDFTQLHSIVLDGFTELLGSGIVLQLVSATELNY----GK-RRATYLERWLT

Q43191 Probable linoleate 9S-lipoxygenase 5

1.2e-04

37.7

Show/hide

Query:  VIMMRSNVLDFTQLHSIVLDGFTELLGSGIVLQLVSATELNYG------KRRATYLERWLT
        +++M+ NVLDF  +++ +LDG  E LG  + LQL+S    + G      +    YLE+WLT
Subjt:  VIMMRSNVLDFTQLHSIVLDGFTELLGSGIVLQLVSATELNYG------KRRATYLERWLT

Arabidopsis top hits

e value

%identity

Alignment

AT1G55020.1 lipoxygenase 1

6.0e-04

39.34

Show/hide

Query:  VIMMRSNVLDFTQLHSIVLDGFTELLGSGIVLQLVSA--TELNYGKR----RATYLERWLT
        V++M+ NVLDF   ++  LD   E LG+ I L+LVS+  T+   G +    +A +LE W+T
Subjt:  VIMMRSNVLDFTQLHSIVLDGFTELLGSGIVLQLVSA--TELNYGKR----RATYLERWLT

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTTCTTCTGTTTCTTTCGAGCCAAATGCAGTGCAGATATAGGCAGCGATGAGATTGCTCCAAAGGACTCTAGCTTTAGTGTTCATTTTGAGGTATTTCCATTC
CTCAATCGATCAGGATTAATCCACCTTGATACCGGAAATGGTAGACTCCTGGACATTGATTTTAAGGCCAGAGGCTTCCTCGAAGACATTAATGATATGTTTGAG
GATGCCTTTAAAACTACCGACAACGCCCTTAGAACGACTGGGGACGTTGTCGGGTCCGTTATAAATGCCAGAGGGAGCTTTATGGACCGGAAAGTGATTATGATG
AGAAGCAATGTCTTAGACTTCACTCAGCTTCATTCTATTGTTCTTGATGGTTTCACTGAACTGTTGGGCAGTGGAATTGTACTGCAACTCGTCAGTGCTACTGAG
CTAAATTATGGAAAAAGGCGAGCTACATATTTGGAGAGGTGGCTGACTTATGCCCAGCGGTGTTTGAAGTTAACTTTGAATGGGAAGATGAATTTGGATATCCAG
GAGCTTTCTATATAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MFFCFFRAKCSADIGSDEIAPKDSSFSVHFEVFPFLNRSGLIHLDTGNGRLLDIDFKARGFLEDINDMFEDAFKTTDNALRTTGDVVGSVINARGSFMDRKVIMM
RSNVLDFTQLHSIVLDGFTELLGSGIVLQLVSATELNYGKRRATYLERWLTYAQRCLKLTLNGKMNLDIQELSI

Clc02G16555 (gene) of Watermelon (cordophanus) v2 genome