; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc02G16670 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G16670
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionF-box domain LysM domain containing protein
Genome locationClcChr02:29266400..29269067
RNA-Seq ExpressionClc02G16670
SyntenyClc02G16670
Gene Ontology termsGO:0006633 - fatty acid biosynthetic process (biological process)
GO:0031408 - oxylipin biosynthetic process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005515 - protein binding (molecular function)
GO:0016702 - oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001810 - F-box domain
IPR018392 - LysM domain
IPR036047 - F-box-like domain superfamily
IPR036779 - LysM domain superfamily
IPR045030 - LysM and putative peptidoglycan-binding domain-containing protein 1-4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139174.1 F-box protein At1g55000 [Cucumis sativus]2.4e-13991.08Show/hide
Query:  MGCCCEQDDDVEILRHLNPSPTVQSLPLQPPPADSSTAVLSPMNSHFFALSCRDILRLIFQNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD
        MGCCC+QDDDVEILRHLNPSP + S P QPPPAD S A+LSPMNSHFFALSCRDILRLIF+NLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD
Subjt:  MGCCCEQDDDVEILRHLNPSPTVQSLPLQPPPADSSTAVLSPMNSHFFALSCRDILRLIFQNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD

Query:  VIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIPT
        V+GKPSSWSFWRDN LGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNP +LINSICYIEMDAIAKREV V+YLDGIP 
Subjt:  VIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIPT

Query:  THHLYGKMTCKHGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA
        T HLYGK+T + G SSVQVNKRVLH+LSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA
Subjt:  THHLYGKMTCKHGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA

XP_022150720.1 F-box protein At1g55000 [Momordica charantia]4.3e-13388.48Show/hide
Query:  MGCCCEQDDDVEILRHLNPSPTVQSLPLQPPPADSSTAVLSPMNSHFFALSCRDILRLIFQNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD
        MGCCC+QDDDVEILRHLNP+  V S    PP ADSSTAVLSPMNSHFFALSCRDILRLIF+ LSIPDLARSSCVCRLW SVASD EIV+GAFKAPWK+KD
Subjt:  MGCCCEQDDDVEILRHLNPSPTVQSLPLQPPPADSSTAVLSPMNSHFFALSCRDILRLIFQNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD

Query:  VIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIPT
        VIGKPSS SFWRDN LGKFAISHRILRGDSLASLAVKYSVQV DIKRLNNMMSDHGIYSRERLLIPIGNP ILINSICYIEMDAIAKREV V+YLDGIPT
Subjt:  VIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIPT

Query:  THHLYGKMTCKHGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA
        THHLYGK+TC+ G SSVQVNK+VLH+LSRSMMVDDETA+YYLSIS+G+PRAALTEFAEDIRWERHMSIA
Subjt:  THHLYGKMTCKHGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA

XP_022937590.1 F-box protein At1g55000 [Cucurbita moschata]9.0e-13188.52Show/hide
Query:  MGCCCEQDDDVEILRHLNPSPTVQSLPLQPPP-ADSSTAVLSPMNSHFFALSCRDILRLIFQNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVK
        MGCCC++DDDVEILRHL+PSPTVQS P Q P   DSSTAVLSPMNSHFFALSCRDILRLIF+ LSIPDLARSSCV RLW+SVASDQEIVSGAFKAPWKVK
Subjt:  MGCCCEQDDDVEILRHLNPSPTVQSLPLQPPP-ADSSTAVLSPMNSHFFALSCRDILRLIFQNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVK

Query:  DVIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIP
        DVIGKPSS SFWRDN LGKFAISHRILRGDSLASLAVKYSVQV DIKRLNNMMSDHGIYSRERLLIPIGNP ILINSICYIEMDAIAKREV  +YLDGIP
Subjt:  DVIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIP

Query:  TTHHLYGKMTCKHGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA
        TTHHLYGK T   G SSVQV KRVLH+LSRSMMVDDETAQYYLSIS+G+PRAALTEFAEDIRWERHM +A
Subjt:  TTHHLYGKMTCKHGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA

XP_023537183.1 F-box protein At1g55000 [Cucurbita pepo subsp. pepo]5.3e-13187.59Show/hide
Query:  MGCCCEQDDDVEILRHLNPSPTVQSLP-----LQPPPADSSTAVLSPMNSHFFALSCRDILRLIFQNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAP
        MGCCC++DDDVEILRHL+PSPTVQS P      QP   DSSTAVLSPMNSHFFALSCRDILRLIF+ LSIPDLARSSCV RLW+SVASDQEIVSGAFKAP
Subjt:  MGCCCEQDDDVEILRHLNPSPTVQSLP-----LQPPPADSSTAVLSPMNSHFFALSCRDILRLIFQNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAP

Query:  WKVKDVIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYL
        WKVKDVIGKPSS SFWRDN LGKFAISHRILRGDSLASLAVKYSVQV DIKRLNNMMSDHGIYSRERLLIPIGNP ILINSICYIEMDAIAKREV  +YL
Subjt:  WKVKDVIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYL

Query:  DGIPTTHHLYGKMTCKHGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA
        DGIPTTHHLYGK T  HG SSVQV KRVLH+LSRSMMVDDETAQYYLSIS+G+PRAALTEFAEDIRWERHM +A
Subjt:  DGIPTTHHLYGKMTCKHGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA

XP_038877035.1 F-box protein At1g55000 [Benincasa hispida]6.9e-13991.08Show/hide
Query:  MGCCCEQDDDVEILRHLNPSPTVQSLPLQPPPADSSTAVLSPMNSHFFALSCRDILRLIFQNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD
        MGCCC+QDDDVEILRHLNPSP VQSLP +PPP DSS  VLSPMNSHF ALSCRDILRLIF+NLSIPDLARSSCV RLWHSVASDQEIVSGAFKAPWKVKD
Subjt:  MGCCCEQDDDVEILRHLNPSPTVQSLPLQPPPADSSTAVLSPMNSHFFALSCRDILRLIFQNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD

Query:  VIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIPT
        V+GKPSSWSFWRDN LGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNM+SDHGIYSRERLLIPIGNP ILINSICYIEMDAIAKREV V+YLDGIP 
Subjt:  VIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIPT

Query:  THHLYGKMTCKHGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA
        THHLYGK TC+ G SSVQVNKRVLH LSRSMMVDDETAQYYLSISNG+PRAALTEFAEDIRWERH+SIA
Subjt:  THHLYGKMTCKHGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA

TrEMBL top hitse value%identityAlignment
A0A0A0LFS6 LysM domain-containing protein1.1e-13991.08Show/hide
Query:  MGCCCEQDDDVEILRHLNPSPTVQSLPLQPPPADSSTAVLSPMNSHFFALSCRDILRLIFQNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD
        MGCCC+QDDDVEILRHLNPSP + S P QPPPAD S A+LSPMNSHFFALSCRDILRLIF+NLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD
Subjt:  MGCCCEQDDDVEILRHLNPSPTVQSLPLQPPPADSSTAVLSPMNSHFFALSCRDILRLIFQNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD

Query:  VIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIPT
        V+GKPSSWSFWRDN LGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNP +LINSICYIEMDAIAKREV V+YLDGIP 
Subjt:  VIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIPT

Query:  THHLYGKMTCKHGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA
        T HLYGK+T + G SSVQVNKRVLH+LSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA
Subjt:  THHLYGKMTCKHGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA

A0A5A7TYE5 Lipoxygenase1.1e-11090.37Show/hide
Query:  MGCCCEQDDDVEILRHLNPSPTVQSLPLQPPPADSSTAVLSPMNSHFFALSCRDILRLIFQNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD
        MGCCC+QDDDVEILRHLNPSP V S PLQPPPAD STA+LSPMNSHFFALSCRDILRLIF++LSIPDLARSSCVCRLWHSVASDQEIV+GAFKAPWKVKD
Subjt:  MGCCCEQDDDVEILRHLNPSPTVQSLPLQPPPADSSTAVLSPMNSHFFALSCRDILRLIFQNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD

Query:  VIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIPT
        V+GKPSSWSFWRDN LGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNP ILINSICYIEMDAIAKREV V+YLDGIP 
Subjt:  VIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIPT

Query:  THHLYGKMTCKHGTSSVQ
        T HLYGK+T + G SSVQ
Subjt:  THHLYGKMTCKHGTSSVQ

A0A6J1D9A3 F-box protein At1g550002.1e-13388.48Show/hide
Query:  MGCCCEQDDDVEILRHLNPSPTVQSLPLQPPPADSSTAVLSPMNSHFFALSCRDILRLIFQNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD
        MGCCC+QDDDVEILRHLNP+  V S    PP ADSSTAVLSPMNSHFFALSCRDILRLIF+ LSIPDLARSSCVCRLW SVASD EIV+GAFKAPWK+KD
Subjt:  MGCCCEQDDDVEILRHLNPSPTVQSLPLQPPPADSSTAVLSPMNSHFFALSCRDILRLIFQNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKD

Query:  VIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIPT
        VIGKPSS SFWRDN LGKFAISHRILRGDSLASLAVKYSVQV DIKRLNNMMSDHGIYSRERLLIPIGNP ILINSICYIEMDAIAKREV V+YLDGIPT
Subjt:  VIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIPT

Query:  THHLYGKMTCKHGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA
        THHLYGK+TC+ G SSVQVNK+VLH+LSRSMMVDDETA+YYLSIS+G+PRAALTEFAEDIRWERHMSIA
Subjt:  THHLYGKMTCKHGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA

A0A6J1FH66 F-box protein At1g550004.4e-13188.52Show/hide
Query:  MGCCCEQDDDVEILRHLNPSPTVQSLPLQPPP-ADSSTAVLSPMNSHFFALSCRDILRLIFQNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVK
        MGCCC++DDDVEILRHL+PSPTVQS P Q P   DSSTAVLSPMNSHFFALSCRDILRLIF+ LSIPDLARSSCV RLW+SVASDQEIVSGAFKAPWKVK
Subjt:  MGCCCEQDDDVEILRHLNPSPTVQSLPLQPPP-ADSSTAVLSPMNSHFFALSCRDILRLIFQNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVK

Query:  DVIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIP
        DVIGKPSS SFWRDN LGKFAISHRILRGDSLASLAVKYSVQV DIKRLNNMMSDHGIYSRERLLIPIGNP ILINSICYIEMDAIAKREV  +YLDGIP
Subjt:  DVIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIP

Query:  TTHHLYGKMTCKHGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA
        TTHHLYGK T   G SSVQV KRVLH+LSRSMMVDDETAQYYLSIS+G+PRAALTEFAEDIRWERHM +A
Subjt:  TTHHLYGKMTCKHGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA

A0A6J1HS58 F-box protein At1g550004.8e-13087.78Show/hide
Query:  MGCCCEQDDDVEILRHLNPSPTVQSLPLQPPP-ADSSTAVLSPMNSHFFALSCRDILRLIFQNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVK
        MGCCC++DDDVEILRHL+PSPTVQS P Q P    SSTAVLSPMNSHFFALSCRDILRLIF+ LSIPDLARSSCV RLW+SVASDQEIVSGAFKAPWKVK
Subjt:  MGCCCEQDDDVEILRHLNPSPTVQSLPLQPPP-ADSSTAVLSPMNSHFFALSCRDILRLIFQNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVK

Query:  DVIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIP
        DVIGKPSS SFWRDN LGKFAISHRILRGDSLASLAVKYSVQV DIKRLNNMMSDHGIYSRER+LIPIGNP ILINSICYIEMDAIAKREV  +YLDGIP
Subjt:  DVIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIP

Query:  TTHHLYGKMTCKHGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA
        TTHHLYGK T   G SSVQV KRVLH+LSRSMMVDDETAQYYLSIS+G+PRAALTEFAEDIRWERHM +A
Subjt:  TTHHLYGKMTCKHGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA

SwissProt top hitse value%identityAlignment
Q5HZA4 LysM and putative peptidoglycan-binding domain-containing protein 18.8e-0435.21Show/hide
Query:  ISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPI-GNPKILINSICYIEMDAIAKREV
        + H++  GD+LA LA+KY V +  IKR N + ++  I+ ++ L IPI   P+ L N +   E +   + EV
Subjt:  ISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPI-GNPKILINSICYIEMDAIAKREV

Q6DEF4 LysM and putative peptidoglycan-binding domain-containing protein 23.0e-0439.29Show/hide
Query:  LGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPK
        LG+  I HR+  G++L  +A+KY V +  IKR+N + S+  I+ R  L IP+ + K
Subjt:  LGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPK

Q9FZ32 F-box protein At1g550001.5e-7258.64Show/hide
Query:  ALSCRDILRLIFQNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRL
        AL CRD L +IFQ L++ DLAR+SCVC++W+SVA++ ++V  AF APW++K+++G+P+S SFWRDN + KFAISHRI RGDS+ SLAVKY+VQV DIKRL
Subjt:  ALSCRDILRLIFQNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRL

Query:  NNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIPTTHHLYGKMTCKHGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGN
        NNMMSDHGIYSR+RLLIPI NP+IL N+ CY+E+D  AKREV V+YL+G P         T +    S    +R++ +L RSM VDD TA YYL+I+ G+
Subjt:  NNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIPTTHHLYGKMTCKHGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGN

Query:  PRAALTEFAEDIRWERHMSI
        PR+AL+EF+ D+RWER   +
Subjt:  PRAALTEFAEDIRWERHMSI

Arabidopsis top hitse value%identityAlignment
AT1G55000.1 peptidoglycan-binding LysM domain-containing protein1.1e-7358.64Show/hide
Query:  ALSCRDILRLIFQNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRL
        AL CRD L +IFQ L++ DLAR+SCVC++W+SVA++ ++V  AF APW++K+++G+P+S SFWRDN + KFAISHRI RGDS+ SLAVKY+VQV DIKRL
Subjt:  ALSCRDILRLIFQNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRL

Query:  NNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIPTTHHLYGKMTCKHGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGN
        NNMMSDHGIYSR+RLLIPI NP+IL N+ CY+E+D  AKREV V+YL+G P         T +    S    +R++ +L RSM VDD TA YYL+I+ G+
Subjt:  NNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIPTTHHLYGKMTCKHGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGN

Query:  PRAALTEFAEDIRWERHMSI
        PR+AL+EF+ D+RWER   +
Subjt:  PRAALTEFAEDIRWERHMSI

AT1G55000.2 peptidoglycan-binding LysM domain-containing protein1.1e-7358.64Show/hide
Query:  ALSCRDILRLIFQNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRL
        AL CRD L +IFQ L++ DLAR+SCVC++W+SVA++ ++V  AF APW++K+++G+P+S SFWRDN + KFAISHRI RGDS+ SLAVKY+VQV DIKRL
Subjt:  ALSCRDILRLIFQNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRL

Query:  NNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIPTTHHLYGKMTCKHGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGN
        NNMMSDHGIYSR+RLLIPI NP+IL N+ CY+E+D  AKREV V+YL+G P         T +    S    +R++ +L RSM VDD TA YYL+I+ G+
Subjt:  NNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIPTTHHLYGKMTCKHGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGN

Query:  PRAALTEFAEDIRWERHMSI
        PR+AL+EF+ D+RWER   +
Subjt:  PRAALTEFAEDIRWERHMSI

AT1G55000.3 peptidoglycan-binding LysM domain-containing protein1.1e-7358.64Show/hide
Query:  ALSCRDILRLIFQNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRL
        AL CRD L +IFQ L++ DLAR+SCVC++W+SVA++ ++V  AF APW++K+++G+P+S SFWRDN + KFAISHRI RGDS+ SLAVKY+VQV DIKRL
Subjt:  ALSCRDILRLIFQNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVIGKPSSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRL

Query:  NNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIPTTHHLYGKMTCKHGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGN
        NNMMSDHGIYSR+RLLIPI NP+IL N+ CY+E+D  AKREV V+YL+G P         T +    S    +R++ +L RSM VDD TA YYL+I+ G+
Subjt:  NNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIPTTHHLYGKMTCKHGTSSVQVNKRVLHTLSRSMMVDDETAQYYLSISNGN

Query:  PRAALTEFAEDIRWERHMSI
        PR+AL+EF+ D+RWER   +
Subjt:  PRAALTEFAEDIRWERHMSI

AT5G08200.1 peptidoglycan-binding LysM domain-containing protein5.1e-0740.32Show/hide
Query:  SSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPI
        SS  F   NS  +  I HRI + D+LA +A+KY V+V D+K++NN+++D  +++ + L IP+
Subjt:  SSWSFWRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPI

AT5G23130.1 Peptidoglycan-binding LysM domain-containing protein1.6e-0542.55Show/hide
Query:  ISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPI
        I HR+ + D+LA +A+KY V+V DI +LN +++D  +++ E L IP+
Subjt:  ISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATGCTGTTGCGAACAAGACGACGACGTTGAGATCCTCAGGCACCTCAATCCCTCGCCGACCGTTCAGTCTCTGCCGCTGCAACCTCCACCGGCGGATTCCTCCAC
TGCCGTACTATCTCCAATGAACTCTCACTTTTTCGCCCTCTCCTGTCGCGACATCCTTCGTCTCATCTTTCAGAACCTTTCCATCCCCGACTTGGCTCGTTCCAGCTGCG
TTTGCCGTCTTTGGCACTCCGTTGCTTCCGATCAGGAAATTGTCTCCGGAGCTTTCAAAGCGCCGTGGAAGGTGAAGGATGTGATCGGGAAGCCGAGCTCCTGGAGCTTC
TGGAGAGATAATTCCCTTGGGAAGTTTGCGATCTCTCATCGAATTCTCCGCGGCGATAGCTTGGCTAGTCTAGCCGTCAAGTATTCGGTTCAGGTTACAGACATAAAACG
TCTGAACAACATGATGAGCGACCATGGGATATACTCGAGAGAAAGATTGTTAATCCCCATTGGCAATCCCAAGATACTCATTAACAGTATATGCTACATCGAGATGGATG
CTATCGCAAAACGGGAAGTTGTGGTGATGTATTTGGATGGAATCCCCACGACCCATCACTTGTATGGTAAGATGACATGCAAACATGGTACGTCTTCTGTTCAAGTGAAC
AAGCGGGTACTGCATACATTGAGTCGGAGCATGATGGTTGATGATGAAACAGCTCAATATTACTTATCCATTTCAAATGGCAATCCTCGAGCTGCTCTTACAGAATTCGC
CGAGGACATCAGGTGGGAGAGGCATATGAGCATTGCCTAG
mRNA sequenceShow/hide mRNA sequence
ACAAAAAGGAAAAAGGTTTAACCATCAAGCATTAGTTTTAAAAGTCGGGGGAATTTCCATCTTGGGCTTAGAAAAAGGGTTATCCGTACAATTAACAACCCAAATATTTC
CAATCCTATCCCTTAATTCTAGAGATTGCAATTTGCTCAAATAAAATCCGACAAATAACAACCATTCATTTCTCTCTCTAAAATGGGATGCTGTTGCGAACAAGACGACG
ACGTTGAGATCCTCAGGCACCTCAATCCCTCGCCGACCGTTCAGTCTCTGCCGCTGCAACCTCCACCGGCGGATTCCTCCACTGCCGTACTATCTCCAATGAACTCTCAC
TTTTTCGCCCTCTCCTGTCGCGACATCCTTCGTCTCATCTTTCAGAACCTTTCCATCCCCGACTTGGCTCGTTCCAGCTGCGTTTGCCGTCTTTGGCACTCCGTTGCTTC
CGATCAGGAAATTGTCTCCGGAGCTTTCAAAGCGCCGTGGAAGGTGAAGGATGTGATCGGGAAGCCGAGCTCCTGGAGCTTCTGGAGAGATAATTCCCTTGGGAAGTTTG
CGATCTCTCATCGAATTCTCCGCGGCGATAGCTTGGCTAGTCTAGCCGTCAAGTATTCGGTTCAGGTTACAGACATAAAACGTCTGAACAACATGATGAGCGACCATGGG
ATATACTCGAGAGAAAGATTGTTAATCCCCATTGGCAATCCCAAGATACTCATTAACAGTATATGCTACATCGAGATGGATGCTATCGCAAAACGGGAAGTTGTGGTGAT
GTATTTGGATGGAATCCCCACGACCCATCACTTGTATGGTAAGATGACATGCAAACATGGTACGTCTTCTGTTCAAGTGAACAAGCGGGTACTGCATACATTGAGTCGGA
GCATGATGGTTGATGATGAAACAGCTCAATATTACTTATCCATTTCAAATGGCAATCCTCGAGCTGCTCTTACAGAATTCGCCGAGGACATCAGGTGGGAGAGGCATATG
AGCATTGCCTAGTTTCATAATGGCAGATTGTTGCTTTGGAGTAAAGATAGTATATAAATTATACAGGTGCTTTCTACTGGAATGTGTTGATCTTCCTCTCCATATCCACA
AAGAATGTTTAGATTAAGAATCCATATCCAACATCAGTTCACTCCTTGGCTGATTGGTATGTGCATCTACATTCTTACTATCATTTGAGTATGGTATTTGACCTTGTTTC
AATATTGTATATATGATGTCTTTTCATATTACTTGAAGATGATGATGCTCTAATATTTGTAACTGTAAATTGAATGTCCTTGGAAGTTAAAACCATGTCTGTTAAGACAA
AAACATCGGAAGCAAACTACGTTTCCCCTATAATTTGTGAACATAAAGATTGAATTAGGGGTGTAAGCGAGTCTGTTTGTGTTACTTTTCGTTTGCTATCAAGATTGAGA
TAAGGATGGAAGGAAATTAAGCTAGGTACATTTTAGGTTAAACTACGCATTTAGTCTTTGAATTTTCATGCTTATGTCTAATAAATTGTCAAACTTTCAATTTTATATAT
AAA
Protein sequenceShow/hide protein sequence
MGCCCEQDDDVEILRHLNPSPTVQSLPLQPPPADSSTAVLSPMNSHFFALSCRDILRLIFQNLSIPDLARSSCVCRLWHSVASDQEIVSGAFKAPWKVKDVIGKPSSWSF
WRDNSLGKFAISHRILRGDSLASLAVKYSVQVTDIKRLNNMMSDHGIYSRERLLIPIGNPKILINSICYIEMDAIAKREVVVMYLDGIPTTHHLYGKMTCKHGTSSVQVN
KRVLHTLSRSMMVDDETAQYYLSISNGNPRAALTEFAEDIRWERHMSIA