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Clc02G16990 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G16990
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionTMV resistance protein N-like
Genome locationClcChr02:29527882..29530866
RNA-Seq ExpressionClc02G16990
SyntenyClc02G16990
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADI99934.1 TIR-NBS-LRR-AAA+ATPase class resistance protein [Cucumis sativus]1.4e-1648.97Show/hide
Query:  RKEVDIIRDLVKEVSS------------KYGVGIDSQLE-----TSSLYEKENKFHYRTQHEYESD----------------ITLAK--LSLIANQLGR-
        RKE D+I DLVK+V S            KY VGIDS+LE     + +L+EK NKFHYR QHEYESD                 TLAK   + IA+Q    
Subjt:  RKEVDIIRDLVKEVSS------------KYGVGIDSQLE-----TSSLYEKENKFHYRTQHEYESD----------------ITLAK--LSLIANQLGR-

Query:  -LLLNVREASKQLDGLVQLQEKPLYEMLKDDLKVVNLDTEIKIVK
          L NVREASKQ +GL QLQE  LYE+L  DLKV+NLD  I I++
Subjt:  -LLLNVREASKQLDGLVQLQEKPLYEMLKDDLKVVNLDTEIKIVK

ADU33178.1 putative TIR-NBS-LRR-AAA+ATPase [Cucumis sativus]6.3e-1750.34Show/hide
Query:  RKEVDIIRDLVKEVSS------------KYGVGIDSQLE-----TSSLYEKENKFHYRTQHEYESD----------------ITLAK--LSLIANQLGR-
        RKE D+I DLVK+V S            KY VGIDS+LE     + SL+EK NKFHYR QHEYESD                 TLAK   + IA+Q    
Subjt:  RKEVDIIRDLVKEVSS------------KYGVGIDSQLE-----TSSLYEKENKFHYRTQHEYESD----------------ITLAK--LSLIANQLGR-

Query:  -LLLNVREASKQLDGLVQLQEKPLYEMLKDDLKVVNLDTEIKIVK
          L NVREASKQ +GL QLQE  LYE+L  DLKVVNLD  I I++
Subjt:  -LLLNVREASKQLDGLVQLQEKPLYEMLKDDLKVVNLDTEIKIVK

KAE8651600.1 hypothetical protein Csa_023480 [Cucumis sativus]6.3e-1750.34Show/hide
Query:  RKEVDIIRDLVKEVSS------------KYGVGIDSQLE-----TSSLYEKENKFHYRTQHEYESD----------------ITLAK--LSLIANQLGR-
        RKE D+I DLVK+V S            KY VGIDS+LE     + SL+EK NKFHYR QHEYESD                 TLAK   + IA+Q    
Subjt:  RKEVDIIRDLVKEVSS------------KYGVGIDSQLE-----TSSLYEKENKFHYRTQHEYESD----------------ITLAK--LSLIANQLGR-

Query:  -LLLNVREASKQLDGLVQLQEKPLYEMLKDDLKVVNLDTEIKIVK
          L NVREASKQ +GL QLQE  LYE+L  DLKVVNLD  I I++
Subjt:  -LLLNVREASKQLDGLVQLQEKPLYEMLKDDLKVVNLDTEIKIVK

TYK18304.1 TMV resistance protein N-like [Cucumis melo var. makuwa]1.8e-1648.97Show/hide
Query:  RKEVDIIRDLVKEVSS------------KYGVGIDSQLE-----TSSLYEKENKFHYRTQHEYESD----------------ITLAK--LSLIANQLGR-
        RKE D+I D+VK+V S            KY VGIDS+LE     + +L+EK NKFHYRTQHEYE D                 TLAK   + IA+Q    
Subjt:  RKEVDIIRDLVKEVSS------------KYGVGIDSQLE-----TSSLYEKENKFHYRTQHEYESD----------------ITLAK--LSLIANQLGR-

Query:  -LLLNVREASKQLDGLVQLQEKPLYEMLKDDLKVVNLDTEIKIVK
          L NVREASKQ +GL QLQE  LYE+L  DLKVVNLD  I I++
Subjt:  -LLLNVREASKQLDGLVQLQEKPLYEMLKDDLKVVNLDTEIKIVK

XP_038877835.1 LOW QUALITY PROTEIN: TMV resistance protein N-like [Benincasa hispida]4.3e-1850.34Show/hide
Query:  RKEVDIIRDLVKEVSS------------KYGVGIDSQLE-----TSSLYEKENKFHYRTQHEYESD----------------ITLAK--LSLIANQLGR-
        RKE D+IRD+VKEV S            KY VGIDS+LE     +   +EK NKFHY+TQH+YESD                 TLAK   + IA+Q    
Subjt:  RKEVDIIRDLVKEVSS------------KYGVGIDSQLE-----TSSLYEKENKFHYRTQHEYESD----------------ITLAK--LSLIANQLGR-

Query:  -LLLNVREASKQLDGLVQLQEKPLYEMLKDDLKVVNLDTEIKIVK
          L NVREASKQ +GLVQLQE  LYE+LKDDLKVV+LD  I I++
Subjt:  -LLLNVREASKQLDGLVQLQEKPLYEMLKDDLKVVNLDTEIKIVK

TrEMBL top hitse value%identityAlignment
A0A0A0LJM0 TIR domain-containing protein3.0e-1750.34Show/hide
Query:  RKEVDIIRDLVKEVSS------------KYGVGIDSQLE-----TSSLYEKENKFHYRTQHEYESD----------------ITLAK--LSLIANQLGR-
        RKE D+I DLVK+V S            KY VGIDS+LE     + SL+EK NKFHYR QHEYESD                 TLAK   + IA+Q    
Subjt:  RKEVDIIRDLVKEVSS------------KYGVGIDSQLE-----TSSLYEKENKFHYRTQHEYESD----------------ITLAK--LSLIANQLGR-

Query:  -LLLNVREASKQLDGLVQLQEKPLYEMLKDDLKVVNLDTEIKIVK
          L NVREASKQ +GL QLQE  LYE+L  DLKVVNLD  I I++
Subjt:  -LLLNVREASKQLDGLVQLQEKPLYEMLKDDLKVVNLDTEIKIVK

A0A5A7TWK7 TIR-NBS-LRR disease resistance protein8.8e-1748.97Show/hide
Query:  RKEVDIIRDLVKEVSS------------KYGVGIDSQLE-----TSSLYEKENKFHYRTQHEYESD----------------ITLAK--LSLIANQLGR-
        RKE D+I D+VK+V S            KY VGIDS+LE     + +L+EK NKFHYRTQHEYE D                 TLAK   + IA+Q    
Subjt:  RKEVDIIRDLVKEVSS------------KYGVGIDSQLE-----TSSLYEKENKFHYRTQHEYESD----------------ITLAK--LSLIANQLGR-

Query:  -LLLNVREASKQLDGLVQLQEKPLYEMLKDDLKVVNLDTEIKIVK
          L NVREASKQ +GL QLQE  LYE+L  DLKVVNLD  I I++
Subjt:  -LLLNVREASKQLDGLVQLQEKPLYEMLKDDLKVVNLDTEIKIVK

A0A5D3D443 TMV resistance protein N-like8.8e-1748.97Show/hide
Query:  RKEVDIIRDLVKEVSS------------KYGVGIDSQLE-----TSSLYEKENKFHYRTQHEYESD----------------ITLAK--LSLIANQLGR-
        RKE D+I D+VK+V S            KY VGIDS+LE     + +L+EK NKFHYRTQHEYE D                 TLAK   + IA+Q    
Subjt:  RKEVDIIRDLVKEVSS------------KYGVGIDSQLE-----TSSLYEKENKFHYRTQHEYESD----------------ITLAK--LSLIANQLGR-

Query:  -LLLNVREASKQLDGLVQLQEKPLYEMLKDDLKVVNLDTEIKIVK
          L NVREASKQ +GL QLQE  LYE+L  DLKVVNLD  I I++
Subjt:  -LLLNVREASKQLDGLVQLQEKPLYEMLKDDLKVVNLDTEIKIVK

D9I8I4 TIR-NBS-LRR-AAA+ATPase class resistance protein6.8e-1748.97Show/hide
Query:  RKEVDIIRDLVKEVSS------------KYGVGIDSQLE-----TSSLYEKENKFHYRTQHEYESD----------------ITLAK--LSLIANQLGR-
        RKE D+I DLVK+V S            KY VGIDS+LE     + +L+EK NKFHYR QHEYESD                 TLAK   + IA+Q    
Subjt:  RKEVDIIRDLVKEVSS------------KYGVGIDSQLE-----TSSLYEKENKFHYRTQHEYESD----------------ITLAK--LSLIANQLGR-

Query:  -LLLNVREASKQLDGLVQLQEKPLYEMLKDDLKVVNLDTEIKIVK
          L NVREASKQ +GL QLQE  LYE+L  DLKV+NLD  I I++
Subjt:  -LLLNVREASKQLDGLVQLQEKPLYEMLKDDLKVVNLDTEIKIVK

E7CHD3 Putative TIR-NBS-LRR-AAA+ATPase3.0e-1750.34Show/hide
Query:  RKEVDIIRDLVKEVSS------------KYGVGIDSQLE-----TSSLYEKENKFHYRTQHEYESD----------------ITLAK--LSLIANQLGR-
        RKE D+I DLVK+V S            KY VGIDS+LE     + SL+EK NKFHYR QHEYESD                 TLAK   + IA+Q    
Subjt:  RKEVDIIRDLVKEVSS------------KYGVGIDSQLE-----TSSLYEKENKFHYRTQHEYESD----------------ITLAK--LSLIANQLGR-

Query:  -LLLNVREASKQLDGLVQLQEKPLYEMLKDDLKVVNLDTEIKIVK
          L NVREASKQ +GL QLQE  LYE+L  DLKVVNLD  I I++
Subjt:  -LLLNVREASKQLDGLVQLQEKPLYEMLKDDLKVVNLDTEIKIVK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAACAACATCTTTGCTAATTAGGCTCCTGTTGGTTGTAAAATCCTATAATTTGAAATTTGTACCCTTTCACTCCCTCTGGGTAGCCTATGATCATACATTTGAAAG
CCCTTGGGTCTACTTTGCCTTTTTTTCAAGTGAACATAGCCATCTTTCTTTTTCCCAGCAAAAAGATTCAGCCCCACCAACATTCTTGTTCTCTGTTTTTAGTTCTGTTT
TCTCTTCAATCATTTGTCTAAGTAGATTCAACCGGAAGGAGGTTGATATTATTCGAGATCTTGTTAAAGAAGTGTCGTCTAAGTATGGAGTGGGAATTGATTCTCAACTA
GAAACATCATCTTTATACGAGAAGGAGAACAAATTCCATTATAGGACACAACATGAGTATGAGTCTGATATTACTTTGGCCAAATTAAGCTTAATTGCGAATCAATTGGG
AAGGTTGTTGCTTAATGTTAGAGAAGCTTCAAAGCAATTGGATGGCCTTGTTCAACTACAGGAAAAACCACTCTATGAGATGTTAAAGGATGATTTGAAGGTTGTCAATC
TTGACACGGAAATTAAGATCGTAAAGGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAACAACATCTTTGCTAATTAGGCTCCTGTTGGTTGTAAAATCCTATAATTTGAAATTTGTACCCTTTCACTCCCTCTGGGTAGCCTATGATCATACATTTGAAAG
CCCTTGGGTCTACTTTGCCTTTTTTTCAAGTGAACATAGCCATCTTTCTTTTTCCCAGCAAAAAGATTCAGCCCCACCAACATTCTTGTTCTCTGTTTTTAGTTCTGTTT
TCTCTTCAATCATTTGTCTAAGTAGATTCAACCGGAAGGAGGTTGATATTATTCGAGATCTTGTTAAAGAAGTGTCGTCTAAGTATGGAGTGGGAATTGATTCTCAACTA
GAAACATCATCTTTATACGAGAAGGAGAACAAATTCCATTATAGGACACAACATGAGTATGAGTCTGATATTACTTTGGCCAAATTAAGCTTAATTGCGAATCAATTGGG
AAGGTTGTTGCTTAATGTTAGAGAAGCTTCAAAGCAATTGGATGGCCTTGTTCAACTACAGGAAAAACCACTCTATGAGATGTTAAAGGATGATTTGAAGGTTGTCAATC
TTGACACGGAAATTAAGATCGTAAAGGAATAG
Protein sequenceShow/hide protein sequence
MKTTSLLIRLLLVVKSYNLKFVPFHSLWVAYDHTFESPWVYFAFFSSEHSHLSFSQQKDSAPPTFLFSVFSSVFSSIICLSRFNRKEVDIIRDLVKEVSSKYGVGIDSQL
ETSSLYEKENKFHYRTQHEYESDITLAKLSLIANQLGRLLLNVREASKQLDGLVQLQEKPLYEMLKDDLKVVNLDTEIKIVKE