; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc02G17010 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G17010
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionTMV resistance protein N-like
Genome locationClcChr02:29543449..29545590
RNA-Seq ExpressionClc02G17010
SyntenyClc02G17010
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047982.1 TMV resistance protein N-like isoform X1 [Cucumis melo var. makuwa]6.9e-4036.72Show/hide
Query:  MKSLFFLDLSFTAIKELPSSIGHLSGCSRFEMVS-------RKSEPTIQPELQVSSRNSKPSPKYTK----------FGCQWLR----IIVDIISKKQDL
        MKSL FLDLSFTAIK+LPSSIG+L+   R  + +        K+   +   L +  RN +   +             +GC+ L      IVDIISKKQDL
Subjt:  MKSLFFLDLSFTAIKELPSSIGHLSGCSRFEMVS-------RKSEPTIQPELQVSSRNSKPSPKYTK----------FGCQWLR----IIVDIISKKQDL

Query:  TLGEISREFLLTGIEIPEWFSYKTTTNLMSARFGY------TILA-----------------------------------KSQELYLI------------
        TLGEISREFLL G+EIP+WFSYKTT+NL+SA F +      T+ A                                   KS+ ++L+            
Subjt:  TLGEISREFLLTGIEIPEWFSYKTTTNLMSARFGY------TILA-----------------------------------KSQELYLI------------

Query:  -------------------------------------------------PPRYVCKDIEALSVRRFVQAMSCKFNCKAMLYAGSYDP-ENVDSNIQPMIF
                                                         P +    DIE + V+R    +S   NCKA+L+AGSYDP   +DSNIQPMIF
Subjt:  -------------------------------------------------PPRYVCKDIEALSVRRFVQAMSCKFNCKAMLYAGSYDP-ENVDSNIQPMIF

Query:  ALHVTYNGDTVICGMEGMGETAVANSLCNKVKWKKDDPRREHLDDSTSFFIVRG
         LHVTY+G TVI GMEGMG+TA+ANSL NK K K +    + LDD +SF++++G
Subjt:  ALHVTYNGDTVICGMEGMGETAVANSLCNKVKWKKDDPRREHLDDSTSFFIVRG

TYK18295.1 TMV resistance protein N-like [Cucumis melo var. makuwa]8.2e-4135.86Show/hide
Query:  MKSLFFLDLSFTAIKELPSSIGH--------------------------------LSGCSRFEMVSRKSEPTIQPELQVSSRNSKPSPKYTKFGCQWLR-
        MKSL+ LDL FTAIKELPSSIG+                                LSGCS F M     +P            + P+      GC+ L  
Subjt:  MKSLFFLDLSFTAIKELPSSIGH--------------------------------LSGCSRFEMVSRKSEPTIQPELQVSSRNSKPSPKYTKFGCQWLR-

Query:  ---IIVDIISKKQDLTLGEISREFLLTGIEIPEWFSYKTTTNLMSARFGY------TILA--------------------------------------KS
            IVDIIS KQDL LGEISREFLL G+EIPEWFSYKT +NL+SA F +      T+ A                                      KS
Subjt:  ---IIVDIISKKQDLTLGEISREFLLTGIEIPEWFSYKTTTNLMSARFGY------TILA--------------------------------------KS

Query:  QELYLIP----------------------------------------------------------------PRYVCKDIEALSVRRFVQAMSCKFNCKAM
        + ++L+                                                                  +    DIE L ++   + +SC  N KAM
Subjt:  QELYLIP----------------------------------------------------------------PRYVCKDIEALSVRRFVQAMSCKFNCKAM

Query:  LYAGSYDPEN-VDSNIQPMIFALHVTYNGDTVICGMEGMGETAVANSLCNKVKWKKD-------DPRREHLDDSTSFFIVRG
        L+AG+YDPE  +DSNIQPMIF LHVTYNG+TVICGMEGMG+T +ANSLCNK KW KD           E LD+STSFF +RG
Subjt:  LYAGSYDPEN-VDSNIQPMIFALHVTYNGDTVICGMEGMGETAVANSLCNKVKWKKD-------DPRREHLDDSTSFFIVRG

XP_008454589.1 PREDICTED: TMV resistance protein N-like isoform X2 [Cucumis melo]1.5e-3935.71Show/hide
Query:  MKSLFFLDLSFTAIKELPSSIGHLSGCSRFEMVS-------RKSEPTIQPELQVSSRNSKPSPKYTK----------FGCQWLR----IIVDIISKKQDL
        MKSL FLDLSFTAIK+LPSSIG+L+   R  + +        K+   +   L +  RN +   +             +GC+ L      IVDIIS+KQDL
Subjt:  MKSLFFLDLSFTAIKELPSSIGHLSGCSRFEMVS-------RKSEPTIQPELQVSSRNSKPSPKYTK----------FGCQWLR----IIVDIISKKQDL

Query:  TLGEISREFLLTGIEIPEWFSYKTTTNLMSARFGY------TILA-----------------------------------KSQELYLI------------
        TLGEISREFLL G+EIP+WFSYKTT+NL+SA F +      T+ A                                   KS+ ++L+            
Subjt:  TLGEISREFLLTGIEIPEWFSYKTTTNLMSARFGY------TILA-----------------------------------KSQELYLI------------

Query:  -------------------------------------------------PPRYVCKDIEALSVRRFVQAMSCKFNCKAMLYAGSYDPENV-DSNIQPMIF
                                                         P +    DIE + V+R    +S   NCKA+L+AGSYDP  + DSNIQPMIF
Subjt:  -------------------------------------------------PPRYVCKDIEALSVRRFVQAMSCKFNCKAMLYAGSYDPENV-DSNIQPMIF

Query:  ALHVTYNGDTVICGMEGMGETAVANSLCNKVKWKKDDPRREHLDDSTSFFIVRGGFHSLSRLFPPKIEFILFRNPSKK
         LHVTY+G TVI GMEGMG+TA+ANSL NK K K +    + L+DS+ F++++G     SR+F        + NPSK+
Subjt:  ALHVTYNGDTVICGMEGMGETAVANSLCNKVKWKKDDPRREHLDDSTSFFIVRGGFHSLSRLFPPKIEFILFRNPSKK

XP_011650108.2 TMV resistance protein N [Cucumis sativus]8.7e-4337.39Show/hide
Query:  MKSLFFLDLSFTAIKELPSSIGHLSGCSRFEMVS-------RKSEPTIQPELQVSSRNSKPSPKYTKF----------GCQWL----RIIVDIISKKQDL
        MKSL  LDL FTAIKELPSS+G+L+  SR  + S         +   +   L++  RN +   +              GC+ +      I DIISKKQDL
Subjt:  MKSLFFLDLSFTAIKELPSSIGHLSGCSRFEMVS-------RKSEPTIQPELQVSSRNSKPSPKYTKF----------GCQWL----RIIVDIISKKQDL

Query:  TLGEISREFLLTGIEIPEWFSYKTTTNLMSARF--------------GYTILAKSQEL----YLIPPRYVCK----------------------------
        TLGEISREFLLTGIE+PEWFSYKTT+NL+SA F               +T+   S E       I  R  C                             
Subjt:  TLGEISREFLLTGIEIPEWFSYKTTTNLMSARF--------------GYTILAKSQEL----YLIPPRYVCK----------------------------

Query:  ---------------------------------------------------------DIEALSVRRFVQAMSCKFNCKAMLYAGSYDPEN-VDSNIQPMI
                                                                 DIE L V+RF + MS   NCKAML+AGSY PE  + SN+QPM+
Subjt:  ---------------------------------------------------------DIEALSVRRFVQAMSCKFNCKAMLYAGSYDPEN-VDSNIQPMI

Query:  FALHVTYNGDTVICGMEGMGETAVANSLCNKVKWKKDDPRREHLDDSTSFFIV
        F LHV+YNGDTVICGMEGM +TA+ANS+CNK  W  D+  R+ LD+ TSF++V
Subjt:  FALHVTYNGDTVICGMEGMGETAVANSLCNKVKWKKDDPRREHLDDSTSFFIV

XP_038877835.1 LOW QUALITY PROTEIN: TMV resistance protein N-like [Benincasa hispida]8.4e-4634.03Show/hide
Query:  KSLFFLDLSFTAIKELPSSIGHLS--------------------------------GCSRFEMVSRKSEPTIQP--------------------------
        KSL FLDL FTAIKELPSSIG+L+                                GCSRFEMVS K  PTIQP                          
Subjt:  KSLFFLDLSFTAIKELPSSIGHLS--------------------------------GCSRFEMVSRKSEPTIQP--------------------------

Query:  --------------------------------ELQVSSRNSKPSP-------------------------------KYTKFGCQWL----RIIVDIISKK
                                        ++++S       P                                    GC+ L      IVDIISKK
Subjt:  --------------------------------ELQVSSRNSKPSP-------------------------------KYTKFGCQWL----RIIVDIISKK

Query:  QDLTLGEISREFLLTGIEIPEWFSYKTTTNLMSARFGY------TILA--------------------------------------KSQELYLIP-----
        QDLTLGEISREFLLT IEIPEWF YKTTTNL+SA F +      T+ A                                      KS+ ++L+      
Subjt:  QDLTLGEISREFLLTGIEIPEWFSYKTTTNLMSARFGY------TILA--------------------------------------KSQELYLIP-----

Query:  -----------------------------------------------------------PRYVCKDIEALSVRRFVQAMSCKFNCKAMLYAGSYDPEN-V
                                                                    +    DIE + V+RF Q +SCK +CKAML+AGSYDPE  +
Subjt:  -----------------------------------------------------------PRYVCKDIEALSVRRFVQAMSCKFNCKAMLYAGSYDPEN-V

Query:  DSNIQPMIFALHVTYNGDTVICGMEGMGETAVANSLCNKVKWKKDDPRREHLDDSTSFFIVRGGF-HSLSRLFPPK
        DSNIQPMIF LHVTYNG T ICGMEGMG+TA+ANSLCNK KW KD P RE LD  TSFF V+GG   SL   FP K
Subjt:  DSNIQPMIFALHVTYNGDTVICGMEGMGETAVANSLCNKVKWKKDDPRREHLDDSTSFFIVRGGF-HSLSRLFPPK

TrEMBL top hitse value%identityAlignment
A0A0A0LJM0 TIR domain-containing protein1.3e-3938.35Show/hide
Query:  LDLSFTAIKELPSSIGHLSGCSRFEMVSRKSEPTIQPELQVSSRNSKPSPKYTKFGCQWL-RI---IVDIISKKQDLTLGEISREFLLTGIEIPEWFSYK
        L LS      LPS +      S  E+ + K    I P L  S +      K    GC+ L RI   IVDIISKKQDLT+GEISREFLLTGIEIPEWFSYK
Subjt:  LDLSFTAIKELPSSIGHLSGCSRFEMVSRKSEPTIQPELQVSSRNSKPSPKYTKFGCQWL-RI---IVDIISKKQDLTLGEISREFLLTGIEIPEWFSYK

Query:  TTTNLMSARFGY------TILA--------------------------------------KSQELYLIP-------------------------------
        TT+NL+SA F +      T+ A                                      KS+ ++L+                                
Subjt:  TTTNLMSARFGY------TILA--------------------------------------KSQELYLIP-------------------------------

Query:  ---------------------------------PRYVCKDIEALSVRRFVQAMSCKFNCKAMLYAGSYDPEN-VDSNIQPMIFALHVTYNGDTVICGMEG
                                          +    DIE L ++RF + MSC  N +AMLYA +YDPE  +DSNIQPMIF LHVTYNG+T ICGMEG
Subjt:  ---------------------------------PRYVCKDIEALSVRRFVQAMSCKFNCKAMLYAGSYDPEN-VDSNIQPMIFALHVTYNGDTVICGMEG

Query:  MGETAVANSLCNKVKWKKDDPR-REHLDDSTSFFIVRGG
        MG+T +ANSLCNK  W  D+ R RE LD+STSF   RGG
Subjt:  MGETAVANSLCNKVKWKKDDPR-REHLDDSTSFFIVRGG

A0A1S3BZ32 TMV resistance protein N-like isoform X27.5e-4035.71Show/hide
Query:  MKSLFFLDLSFTAIKELPSSIGHLSGCSRFEMVS-------RKSEPTIQPELQVSSRNSKPSPKYTK----------FGCQWLR----IIVDIISKKQDL
        MKSL FLDLSFTAIK+LPSSIG+L+   R  + +        K+   +   L +  RN +   +             +GC+ L      IVDIIS+KQDL
Subjt:  MKSLFFLDLSFTAIKELPSSIGHLSGCSRFEMVS-------RKSEPTIQPELQVSSRNSKPSPKYTK----------FGCQWLR----IIVDIISKKQDL

Query:  TLGEISREFLLTGIEIPEWFSYKTTTNLMSARFGY------TILA-----------------------------------KSQELYLI------------
        TLGEISREFLL G+EIP+WFSYKTT+NL+SA F +      T+ A                                   KS+ ++L+            
Subjt:  TLGEISREFLLTGIEIPEWFSYKTTTNLMSARFGY------TILA-----------------------------------KSQELYLI------------

Query:  -------------------------------------------------PPRYVCKDIEALSVRRFVQAMSCKFNCKAMLYAGSYDPENV-DSNIQPMIF
                                                         P +    DIE + V+R    +S   NCKA+L+AGSYDP  + DSNIQPMIF
Subjt:  -------------------------------------------------PPRYVCKDIEALSVRRFVQAMSCKFNCKAMLYAGSYDPENV-DSNIQPMIF

Query:  ALHVTYNGDTVICGMEGMGETAVANSLCNKVKWKKDDPRREHLDDSTSFFIVRGGFHSLSRLFPPKIEFILFRNPSKK
         LHVTY+G TVI GMEGMG+TA+ANSL NK K K +    + L+DS+ F++++G     SR+F        + NPSK+
Subjt:  ALHVTYNGDTVICGMEGMGETAVANSLCNKVKWKKDDPRREHLDDSTSFFIVRGGFHSLSRLFPPKIEFILFRNPSKK

A0A1S3BZQ4 TMV resistance protein N-like isoform X17.5e-4035.71Show/hide
Query:  MKSLFFLDLSFTAIKELPSSIGHLSGCSRFEMVS-------RKSEPTIQPELQVSSRNSKPSPKYTK----------FGCQWLR----IIVDIISKKQDL
        MKSL FLDLSFTAIK+LPSSIG+L+   R  + +        K+   +   L +  RN +   +             +GC+ L      IVDIIS+KQDL
Subjt:  MKSLFFLDLSFTAIKELPSSIGHLSGCSRFEMVS-------RKSEPTIQPELQVSSRNSKPSPKYTK----------FGCQWLR----IIVDIISKKQDL

Query:  TLGEISREFLLTGIEIPEWFSYKTTTNLMSARFGY------TILA-----------------------------------KSQELYLI------------
        TLGEISREFLL G+EIP+WFSYKTT+NL+SA F +      T+ A                                   KS+ ++L+            
Subjt:  TLGEISREFLLTGIEIPEWFSYKTTTNLMSARFGY------TILA-----------------------------------KSQELYLI------------

Query:  -------------------------------------------------PPRYVCKDIEALSVRRFVQAMSCKFNCKAMLYAGSYDPENV-DSNIQPMIF
                                                         P +    DIE + V+R    +S   NCKA+L+AGSYDP  + DSNIQPMIF
Subjt:  -------------------------------------------------PPRYVCKDIEALSVRRFVQAMSCKFNCKAMLYAGSYDPENV-DSNIQPMIF

Query:  ALHVTYNGDTVICGMEGMGETAVANSLCNKVKWKKDDPRREHLDDSTSFFIVRGGFHSLSRLFPPKIEFILFRNPSKK
         LHVTY+G TVI GMEGMG+TA+ANSL NK K K +    + L+DS+ F++++G     SR+F        + NPSK+
Subjt:  ALHVTYNGDTVICGMEGMGETAVANSLCNKVKWKKDDPRREHLDDSTSFFIVRGGFHSLSRLFPPKIEFILFRNPSKK

A0A5A7TWV1 TMV resistance protein N-like isoform X13.4e-4036.72Show/hide
Query:  MKSLFFLDLSFTAIKELPSSIGHLSGCSRFEMVS-------RKSEPTIQPELQVSSRNSKPSPKYTK----------FGCQWLR----IIVDIISKKQDL
        MKSL FLDLSFTAIK+LPSSIG+L+   R  + +        K+   +   L +  RN +   +             +GC+ L      IVDIISKKQDL
Subjt:  MKSLFFLDLSFTAIKELPSSIGHLSGCSRFEMVS-------RKSEPTIQPELQVSSRNSKPSPKYTK----------FGCQWLR----IIVDIISKKQDL

Query:  TLGEISREFLLTGIEIPEWFSYKTTTNLMSARFGY------TILA-----------------------------------KSQELYLI------------
        TLGEISREFLL G+EIP+WFSYKTT+NL+SA F +      T+ A                                   KS+ ++L+            
Subjt:  TLGEISREFLLTGIEIPEWFSYKTTTNLMSARFGY------TILA-----------------------------------KSQELYLI------------

Query:  -------------------------------------------------PPRYVCKDIEALSVRRFVQAMSCKFNCKAMLYAGSYDP-ENVDSNIQPMIF
                                                         P +    DIE + V+R    +S   NCKA+L+AGSYDP   +DSNIQPMIF
Subjt:  -------------------------------------------------PPRYVCKDIEALSVRRFVQAMSCKFNCKAMLYAGSYDP-ENVDSNIQPMIF

Query:  ALHVTYNGDTVICGMEGMGETAVANSLCNKVKWKKDDPRREHLDDSTSFFIVRG
         LHVTY+G TVI GMEGMG+TA+ANSL NK K K +    + LDD +SF++++G
Subjt:  ALHVTYNGDTVICGMEGMGETAVANSLCNKVKWKKDDPRREHLDDSTSFFIVRG

A0A5D3D427 TMV resistance protein N-like4.0e-4135.86Show/hide
Query:  MKSLFFLDLSFTAIKELPSSIGH--------------------------------LSGCSRFEMVSRKSEPTIQPELQVSSRNSKPSPKYTKFGCQWLR-
        MKSL+ LDL FTAIKELPSSIG+                                LSGCS F M     +P            + P+      GC+ L  
Subjt:  MKSLFFLDLSFTAIKELPSSIGH--------------------------------LSGCSRFEMVSRKSEPTIQPELQVSSRNSKPSPKYTKFGCQWLR-

Query:  ---IIVDIISKKQDLTLGEISREFLLTGIEIPEWFSYKTTTNLMSARFGY------TILA--------------------------------------KS
            IVDIIS KQDL LGEISREFLL G+EIPEWFSYKT +NL+SA F +      T+ A                                      KS
Subjt:  ---IIVDIISKKQDLTLGEISREFLLTGIEIPEWFSYKTTTNLMSARFGY------TILA--------------------------------------KS

Query:  QELYLIP----------------------------------------------------------------PRYVCKDIEALSVRRFVQAMSCKFNCKAM
        + ++L+                                                                  +    DIE L ++   + +SC  N KAM
Subjt:  QELYLIP----------------------------------------------------------------PRYVCKDIEALSVRRFVQAMSCKFNCKAM

Query:  LYAGSYDPEN-VDSNIQPMIFALHVTYNGDTVICGMEGMGETAVANSLCNKVKWKKD-------DPRREHLDDSTSFFIVRG
        L+AG+YDPE  +DSNIQPMIF LHVTYNG+TVICGMEGMG+T +ANSLCNK KW KD           E LD+STSFF +RG
Subjt:  LYAGSYDPEN-VDSNIQPMIFALHVTYNGDTVICGMEGMGETAVANSLCNKVKWKKD-------DPRREHLDDSTSFFIVRG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATCTTTATTCTTTTTGGATTTGAGTTTTACTGCCATAAAGGAGTTACCTTCATCAATTGGTCATCTTAGTGGGTGTTCTAGATTTGAAATGGTTTCACGTAAATC
GGAGCCAACCATCCAACCAGAATTGCAAGTTTCTTCACGAAATTCCAAACCTTCCCCAAAATATACAAAATTTGGGTGCCAGTGGCTGCGAATCATTGTGGATATAATAT
CAAAAAAACAGGATCTTACGTTGGGTGAGATTTCAAGAGAGTTTTTACTAACGGGCATTGAGATTCCAGAATGGTTCAGCTATAAGACTACAACAAATTTGATGAGTGCT
AGGTTTGGCTACACCATACTGGCCAAATCTCAAGAATTATATTTAATACCGCCAAGATATGTTTGCAAGGATATTGAGGCTCTTTCTGTCAGACGCTTTGTTCAAGCGAT
GTCCTGCAAATTTAATTGCAAAGCAATGTTGTATGCTGGAAGTTATGATCCAGAAAACGTTGATTCCAACATACAACCTATGATTTTTGCGTTGCACGTAACATATAATG
GTGACACAGTGATATGTGGAATGGAAGGCATGGGAGAGACTGCAGTCGCCAACTCTTTATGCAACAAAGTTAAATGGAAAAAGGACGACCCTCGGAGAGAACATTTAGAT
GATTCTACAAGCTTTTTCATAGTCCGAGGAGGGTTCCATAGCTTGTCCCGTTTGTTTCCCCCAAAAATTGAATTCATATTGTTTCGCAATCCATCGAAGAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAATCTTTATTCTTTTTGGATTTGAGTTTTACTGCCATAAAGGAGTTACCTTCATCAATTGGTCATCTTAGTGGGTGTTCTAGATTTGAAATGGTTTCACGTAAATC
GGAGCCAACCATCCAACCAGAATTGCAAGTTTCTTCACGAAATTCCAAACCTTCCCCAAAATATACAAAATTTGGGTGCCAGTGGCTGCGAATCATTGTGGATATAATAT
CAAAAAAACAGGATCTTACGTTGGGTGAGATTTCAAGAGAGTTTTTACTAACGGGCATTGAGATTCCAGAATGGTTCAGCTATAAGACTACAACAAATTTGATGAGTGCT
AGGTTTGGCTACACCATACTGGCCAAATCTCAAGAATTATATTTAATACCGCCAAGATATGTTTGCAAGGATATTGAGGCTCTTTCTGTCAGACGCTTTGTTCAAGCGAT
GTCCTGCAAATTTAATTGCAAAGCAATGTTGTATGCTGGAAGTTATGATCCAGAAAACGTTGATTCCAACATACAACCTATGATTTTTGCGTTGCACGTAACATATAATG
GTGACACAGTGATATGTGGAATGGAAGGCATGGGAGAGACTGCAGTCGCCAACTCTTTATGCAACAAAGTTAAATGGAAAAAGGACGACCCTCGGAGAGAACATTTAGAT
GATTCTACAAGCTTTTTCATAGTCCGAGGAGGGTTCCATAGCTTGTCCCGTTTGTTTCCCCCAAAAATTGAATTCATATTGTTTCGCAATCCATCGAAGAAGTGA
Protein sequenceShow/hide protein sequence
MKSLFFLDLSFTAIKELPSSIGHLSGCSRFEMVSRKSEPTIQPELQVSSRNSKPSPKYTKFGCQWLRIIVDIISKKQDLTLGEISREFLLTGIEIPEWFSYKTTTNLMSA
RFGYTILAKSQELYLIPPRYVCKDIEALSVRRFVQAMSCKFNCKAMLYAGSYDPENVDSNIQPMIFALHVTYNGDTVICGMEGMGETAVANSLCNKVKWKKDDPRREHLD
DSTSFFIVRGGFHSLSRLFPPKIEFILFRNPSKK