; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc02G17500 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G17500
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionNeurogenic locus notch-like protein
Genome locationClcChr02:30054436..30060060
RNA-Seq ExpressionClc02G17500
SyntenyClc02G17500
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004139226.1 uncharacterized protein LOC101221137 [Cucumis sativus]2.2e-10082.33Show/hide
Query:  MATSSHLAVDFLSIFLLLLLPISTVIA-DTPFPFLDKICEEVNCGKGNCTADARY-PFGFICQCDSGWKRTRDNDDDLTFLPCVIPNCSLNYGCQPAPPP
        MA SSH+ VDFLSIFLLLLLPIS VIA D PFPF DK+CEEVNCGKGNCT    + PFGF C+CD GWKRTRDNDDDL FLPCVIPNC+L+YGCQPAPPP
Subjt:  MATSSHLAVDFLSIFLLLLLPISTVIA-DTPFPFLDKICEEVNCGKGNCTADARY-PFGFICQCDSGWKRTRDNDDDLTFLPCVIPNCSLNYGCQPAPPP

Query:  VPAKPVPDNSSFFDPCYWAYCGEGKCVKNMTYIHTCECNPGYYNLLNTSAFPCYSDCTIGSDCAKLGIKVANVNATGNGSGSGNGTGQGNSIIPPGKFQW
        VP KPVP NSSFF+PCYWAYCG+G CV+N TYIHTCEC  GYYNLLN S FPCYSDCTIGSDCAKLGIKVANVN T NGSGSGNGTG GNSI+ PGKFQW
Subjt:  VPAKPVPDNSSFFDPCYWAYCGEGKCVKNMTYIHTCECNPGYYNLLNTSAFPCYSDCTIGSDCAKLGIKVANVNATGNGSGSGNGTGQGNSIIPPGKFQW

Query:  AAIAILFAMAMELWN
         A+AILFAMAMELWN
Subjt:  AAIAILFAMAMELWN

XP_022143152.1 uncharacterized protein LOC111013088 [Momordica charantia]1.5e-9981.69Show/hide
Query:  MATSSHLAVDFLSIFLLLLLPISTVIADTPFPFLDKICEEVNCGKGNCTADARYPFGFICQCDSGWKRTRDNDDDLTFLPCVIPNCSLNYGCQPAPPPVP
        MA  SH A   L+I L LL+ I  V+AD PFPF +K+CEEVNCGKGNCTADA YPFGFIC CDSGWKRTRDNDDDLTFLPCVIPNCSLNYGCQPAPPPVP
Subjt:  MATSSHLAVDFLSIFLLLLLPISTVIADTPFPFLDKICEEVNCGKGNCTADARYPFGFICQCDSGWKRTRDNDDDLTFLPCVIPNCSLNYGCQPAPPPVP

Query:  AKPVPDNSSFFDPCYWAYCGEGKCVKNMTYIHTCECNPGYYNLLNTSAFPCYSDCTIGSDCAKLGIKVANVNATGNGSGSGNGTGQGNSIIPPGKFQWAA
         K VP NSSFFDPCYWAYCGEG+CVKN TY HTC CNPGYYNLLNTSAFPCYSDCTIGSDCAKLGIKVANVN+TGN  G+G GTGQGNSI+ PGKFQ  A
Subjt:  AKPVPDNSSFFDPCYWAYCGEGKCVKNMTYIHTCECNPGYYNLLNTSAFPCYSDCTIGSDCAKLGIKVANVNATGNGSGSGNGTGQGNSIIPPGKFQWAA

Query:  IAILFAMAMELWN
        +AI+F+MAMELWN
Subjt:  IAILFAMAMELWN

XP_022965938.1 uncharacterized protein LOC111465666 [Cucurbita maxima]3.8e-9277Show/hide
Query:  MATSSHLAVDFLSIFLLLLLPISTVIADTPFPFLDKICEEVNCGKGNCTADARYPFGFICQCDSGWKRTRDNDDDLTFLPCVIPNCSLNYGCQPAPPPVP
        MA SS  AVDFL++ +L+LLP+  V+AD   PFLDKIC+EVNCGKGNCT D  YPF F C+CDSGWKRTRD+DDDLTFLPCVIPNCSL+YGCQ APPPVP
Subjt:  MATSSHLAVDFLSIFLLLLLPISTVIADTPFPFLDKICEEVNCGKGNCTADARYPFGFICQCDSGWKRTRDNDDDLTFLPCVIPNCSLNYGCQPAPPPVP

Query:  AKPVPDNSSFFDPCYWAYCGEGKCVKNMTYIHTCECNPGYYNLLNTSAFPCYSDCTIGSDCAKLGIKVANVNATGNGSGSGNGTGQGNSIIPPGKFQWAA
         KPVP NSSFF+PCYWAYCGEG C KN TY HTCEC  G+YNLLN SAFPCYSDCTIGSDCAKLGIKVANVN++ NGSG G+GTGQGNS++ PGKF WAA
Subjt:  AKPVPDNSSFFDPCYWAYCGEGKCVKNMTYIHTCECNPGYYNLLNTSAFPCYSDCTIGSDCAKLGIKVANVNATGNGSGSGNGTGQGNSIIPPGKFQWAA

Query:  IAILFAMAMELWN
        +AI+F M MELWN
Subjt:  IAILFAMAMELWN

XP_023537938.1 uncharacterized protein LOC111798832 [Cucurbita pepo subsp. pepo]5.0e-9277Show/hide
Query:  MATSSHLAVDFLSIFLLLLLPISTVIADTPFPFLDKICEEVNCGKGNCTADARYPFGFICQCDSGWKRTRDNDDDLTFLPCVIPNCSLNYGCQPAPPPVP
        MA SS  AVDFL++ +L+LLP+  V+AD   PFLDKIC+EVNCGKGNCT D  YPF F C+CDSGWKRTRD+DDDLTFLPCVIPNCSL+YGCQ APPPVP
Subjt:  MATSSHLAVDFLSIFLLLLLPISTVIADTPFPFLDKICEEVNCGKGNCTADARYPFGFICQCDSGWKRTRDNDDDLTFLPCVIPNCSLNYGCQPAPPPVP

Query:  AKPVPDNSSFFDPCYWAYCGEGKCVKNMTYIHTCECNPGYYNLLNTSAFPCYSDCTIGSDCAKLGIKVANVNATGNGSGSGNGTGQGNSIIPPGKFQWAA
         KPVP NSSFF+PCYWAYCGEG C KN TY HTCEC+ G+YNLLN SAFPCYSDCTIGSDCAKLGIKVANVN++ NGSG G+GTGQGNS++ PGKF W A
Subjt:  AKPVPDNSSFFDPCYWAYCGEGKCVKNMTYIHTCECNPGYYNLLNTSAFPCYSDCTIGSDCAKLGIKVANVNATGNGSGSGNGTGQGNSIIPPGKFQWAA

Query:  IAILFAMAMELWN
        +AILF M MELWN
Subjt:  IAILFAMAMELWN

XP_038891234.1 uncharacterized protein LOC120080588 [Benincasa hispida]1.2e-9380.29Show/hide
Query:  SSHLAVDFLSIFLLLLLPISTVIADTPFPFLDKICEEVNCGKGNCTADARYPFGFICQCDSGWKRTRDNDDDLTFLPCVIPNCSLNYGCQPAPPPVPAKP
        SSH  VDFL I L  L+ ++ V AD  FPFLDKICEEVNCGKGNCTADA YPFGF C+C+SGWKRTR++DDDLTFLPCVIPNCSLNYGCQPAPPPVP KP
Subjt:  SSHLAVDFLSIFLLLLLPISTVIADTPFPFLDKICEEVNCGKGNCTADARYPFGFICQCDSGWKRTRDNDDDLTFLPCVIPNCSLNYGCQPAPPPVPAKP

Query:  VPDNSSFFDPCYWAYCGEGKCVKNMTYIHTCECNPGYYNLLNTSAFPCYSDCTIGSDCAKLGIKVANVNATGNGSGSGNGTGQGNSIIPPGKFQWAAIAI
        VP+NSSFFD CYWAYCGEG CVKN TY HTCEC  GYYNLLN SAFPCYSDCTIGSDCAKLGIKVANVN+T NGSG   GTGQGNSI+P  K  W AIAI
Subjt:  VPDNSSFFDPCYWAYCGEGKCVKNMTYIHTCECNPGYYNLLNTSAFPCYSDCTIGSDCAKLGIKVANVNATGNGSGSGNGTGQGNSIIPPGKFQWAAIAI

Query:  LFAMAMEL
        LFAM+MEL
Subjt:  LFAMAMEL

TrEMBL top hitse value%identityAlignment
A0A0A0LLE2 Uncharacterized protein1.1e-10082.33Show/hide
Query:  MATSSHLAVDFLSIFLLLLLPISTVIA-DTPFPFLDKICEEVNCGKGNCTADARY-PFGFICQCDSGWKRTRDNDDDLTFLPCVIPNCSLNYGCQPAPPP
        MA SSH+ VDFLSIFLLLLLPIS VIA D PFPF DK+CEEVNCGKGNCT    + PFGF C+CD GWKRTRDNDDDL FLPCVIPNC+L+YGCQPAPPP
Subjt:  MATSSHLAVDFLSIFLLLLLPISTVIA-DTPFPFLDKICEEVNCGKGNCTADARY-PFGFICQCDSGWKRTRDNDDDLTFLPCVIPNCSLNYGCQPAPPP

Query:  VPAKPVPDNSSFFDPCYWAYCGEGKCVKNMTYIHTCECNPGYYNLLNTSAFPCYSDCTIGSDCAKLGIKVANVNATGNGSGSGNGTGQGNSIIPPGKFQW
        VP KPVP NSSFF+PCYWAYCG+G CV+N TYIHTCEC  GYYNLLN S FPCYSDCTIGSDCAKLGIKVANVN T NGSGSGNGTG GNSI+ PGKFQW
Subjt:  VPAKPVPDNSSFFDPCYWAYCGEGKCVKNMTYIHTCECNPGYYNLLNTSAFPCYSDCTIGSDCAKLGIKVANVNATGNGSGSGNGTGQGNSIIPPGKFQW

Query:  AAIAILFAMAMELWN
         A+AILFAMAMELWN
Subjt:  AAIAILFAMAMELWN

A0A1S4DZT9 uncharacterized protein LOC1034995671.2e-8680.63Show/hide
Query:  MATSSHLAVDFLSIFLLLLLPISTVIA-DTPFPFLDKICEEVNCGKGNCTADARY-PFGFICQCDSGWKRTRDNDDDLTFLPCVIPNCSLNYGCQPAPPP
        M  SSH+ VDFLSIFLLLLLP S V+A D+PFP LDK+CEEVNCGKGNCT    + PFGF C+CD GWKRTRDNDDDL FLPCVIPNC+LNYGCQPAPPP
Subjt:  MATSSHLAVDFLSIFLLLLLPISTVIA-DTPFPFLDKICEEVNCGKGNCTADARY-PFGFICQCDSGWKRTRDNDDDLTFLPCVIPNCSLNYGCQPAPPP

Query:  VPAKPVPDNSSFFDPCYWAYCGEGKCVKNMTYIHTCECNPGYYNLLNTSAFPCYSDCTIGSDCAKLGIKVANVNAT-GNGSGSGNGTGQGN
        VP KPVP NSSFF+PCYWAYCGEG CV+N TYIHTCEC PG+YNLLN S FPCY+DCTIGSDCAKLGIKVANVN T  NGSGSGNGTG GN
Subjt:  VPAKPVPDNSSFFDPCYWAYCGEGKCVKNMTYIHTCECNPGYYNLLNTSAFPCYSDCTIGSDCAKLGIKVANVNAT-GNGSGSGNGTGQGN

A0A6J1CPY4 uncharacterized protein LOC1110130887.0e-10081.69Show/hide
Query:  MATSSHLAVDFLSIFLLLLLPISTVIADTPFPFLDKICEEVNCGKGNCTADARYPFGFICQCDSGWKRTRDNDDDLTFLPCVIPNCSLNYGCQPAPPPVP
        MA  SH A   L+I L LL+ I  V+AD PFPF +K+CEEVNCGKGNCTADA YPFGFIC CDSGWKRTRDNDDDLTFLPCVIPNCSLNYGCQPAPPPVP
Subjt:  MATSSHLAVDFLSIFLLLLLPISTVIADTPFPFLDKICEEVNCGKGNCTADARYPFGFICQCDSGWKRTRDNDDDLTFLPCVIPNCSLNYGCQPAPPPVP

Query:  AKPVPDNSSFFDPCYWAYCGEGKCVKNMTYIHTCECNPGYYNLLNTSAFPCYSDCTIGSDCAKLGIKVANVNATGNGSGSGNGTGQGNSIIPPGKFQWAA
         K VP NSSFFDPCYWAYCGEG+CVKN TY HTC CNPGYYNLLNTSAFPCYSDCTIGSDCAKLGIKVANVN+TGN  G+G GTGQGNSI+ PGKFQ  A
Subjt:  AKPVPDNSSFFDPCYWAYCGEGKCVKNMTYIHTCECNPGYYNLLNTSAFPCYSDCTIGSDCAKLGIKVANVNATGNGSGSGNGTGQGNSIIPPGKFQWAA

Query:  IAILFAMAMELWN
        +AI+F+MAMELWN
Subjt:  IAILFAMAMELWN

A0A6J1FHH1 uncharacterized protein LOC1114440151.6e-9177Show/hide
Query:  MATSSHLAVDFLSIFLLLLLPISTVIADTPFPFLDKICEEVNCGKGNCTADARYPFGFICQCDSGWKRTRDNDDDLTFLPCVIPNCSLNYGCQPAPPPVP
        M  SS  AVDFL I +L+LLP+  V+AD   PFLDKIC+EVNCGKGNCT D  YPF F C+CDSGWKRTRD+DDDLTFLPCVIPNCSL+YGCQ APPPVP
Subjt:  MATSSHLAVDFLSIFLLLLLPISTVIADTPFPFLDKICEEVNCGKGNCTADARYPFGFICQCDSGWKRTRDNDDDLTFLPCVIPNCSLNYGCQPAPPPVP

Query:  AKPVPDNSSFFDPCYWAYCGEGKCVKNMTYIHTCECNPGYYNLLNTSAFPCYSDCTIGSDCAKLGIKVANVNATGNGSGSGNGTGQGNSIIPPGKFQWAA
         KPVP NSSFF+PCYWAYCGEG C KN TY HTCEC  G+YNLLN SAFPCYSDCTIGSDCAKLGIKVANVN++ NGSG G+GTGQGNS++ PGKF W A
Subjt:  AKPVPDNSSFFDPCYWAYCGEGKCVKNMTYIHTCECNPGYYNLLNTSAFPCYSDCTIGSDCAKLGIKVANVNATGNGSGSGNGTGQGNSIIPPGKFQWAA

Query:  IAILFAMAMELWN
        +AILF M MELWN
Subjt:  IAILFAMAMELWN

A0A6J1HQE9 uncharacterized protein LOC1114656661.9e-9277Show/hide
Query:  MATSSHLAVDFLSIFLLLLLPISTVIADTPFPFLDKICEEVNCGKGNCTADARYPFGFICQCDSGWKRTRDNDDDLTFLPCVIPNCSLNYGCQPAPPPVP
        MA SS  AVDFL++ +L+LLP+  V+AD   PFLDKIC+EVNCGKGNCT D  YPF F C+CDSGWKRTRD+DDDLTFLPCVIPNCSL+YGCQ APPPVP
Subjt:  MATSSHLAVDFLSIFLLLLLPISTVIADTPFPFLDKICEEVNCGKGNCTADARYPFGFICQCDSGWKRTRDNDDDLTFLPCVIPNCSLNYGCQPAPPPVP

Query:  AKPVPDNSSFFDPCYWAYCGEGKCVKNMTYIHTCECNPGYYNLLNTSAFPCYSDCTIGSDCAKLGIKVANVNATGNGSGSGNGTGQGNSIIPPGKFQWAA
         KPVP NSSFF+PCYWAYCGEG C KN TY HTCEC  G+YNLLN SAFPCYSDCTIGSDCAKLGIKVANVN++ NGSG G+GTGQGNS++ PGKF WAA
Subjt:  AKPVPDNSSFFDPCYWAYCGEGKCVKNMTYIHTCECNPGYYNLLNTSAFPCYSDCTIGSDCAKLGIKVANVNATGNGSGSGNGTGQGNSIIPPGKFQWAA

Query:  IAILFAMAMELWN
        +AI+F M MELWN
Subjt:  IAILFAMAMELWN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G14746.1 CONTAINS InterPro DOMAIN/s: EGF-like (InterPro:IPR006210); Has 259 Blast hits to 234 proteins in 55 species: Archae - 0; Bacteria - 0; Metazoa - 184; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).6.0e-3541.24Show/hide
Query:  LLLLPISTVIAD--TPF--PFLDKICEEVNCGKGNCTADARYPFGFICQCDSGWKRTRDNDDDLTFLPCVIPNCSLNYGCQPAPPPVPAKPVP-DN-SSF
        LLL+   T  +D  +P   P  D IC+EV CGKG C A +   F + C+C+ GWK+    D  L FLPC+ PNC+ +  C  A  P   KP P DN +SF
Subjt:  LLLLPISTVIAD--TPF--PFLDKICEEVNCGKGNCTADARYPFGFICQCDSGWKRTRDNDDDLTFLPCVIPNCSLNYGCQPAPPPVPAKPVP-DN-SSF

Query:  FDPCYWAYCGEGKCVKNMTYIHTCECNPGYYNLLNTSAFPCYSDCTIGSDCAKLGIKVANVNATGNGSGSGNGTGQG
        FDPC W  CG G C  +M + ++C C  GY NL+N + FPC   C +G DC  LGI ++N +++   +   +   QG
Subjt:  FDPCYWAYCGEGKCVKNMTYIHTCECNPGYYNLLNTSAFPCYSDCTIGSDCAKLGIKVANVNATGNGSGSGNGTGQG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACTTCCTCTCACCTTGCTGTTGACTTTCTCTCCATCTTCCTCCTCCTTCTCCTTCCTATCTCTACTGTTATAGCAGATACTCCTTTTCCATTTCTTGATAAAAT
ATGTGAAGAAGTGAACTGCGGAAAGGGAAATTGCACAGCCGACGCCCGATATCCGTTCGGATTCATATGCCAATGCGATTCCGGTTGGAAGCGAACTCGCGACAATGACG
ACGATCTCACTTTTCTTCCCTGCGTAATCCCTAACTGTTCTCTTAATTATGGCTGCCAGCCGGCGCCACCGCCGGTGCCGGCGAAACCGGTCCCGGATAACTCCTCTTTC
TTCGACCCTTGCTATTGGGCTTATTGTGGAGAAGGAAAGTGTGTGAAGAACATGACTTATATACACACATGTGAATGCAACCCTGGCTACTACAATCTCCTCAACACTTC
TGCCTTCCCTTGCTATAGTGATTGTACTATTGGATCAGATTGTGCAAAGCTTGGGATTAAAGTTGCAAATGTGAATGCTACGGGTAATGGAAGTGGTTCTGGCAATGGCA
CTGGACAAGGAAACTCGATTATTCCACCAGGAAAGTTTCAGTGGGCAGCTATAGCAATTTTATTTGCCATGGCTATGGAGCTTTGGAACTAG
mRNA sequenceShow/hide mRNA sequence
CTCTCTCTCTCTCTCTCTCTCTAGAAGAAATTAGAAAATGGCAACTTCCTCTCACCTTGCTGTTGACTTTCTCTCCATCTTCCTCCTCCTTCTCCTTCCTATCTCTACTG
TTATAGCAGATACTCCTTTTCCATTTCTTGATAAAATATGTGAAGAAGTGAACTGCGGAAAGGGAAATTGCACAGCCGACGCCCGATATCCGTTCGGATTCATATGCCAA
TGCGATTCCGGTTGGAAGCGAACTCGCGACAATGACGACGATCTCACTTTTCTTCCCTGCGTAATCCCTAACTGTTCTCTTAATTATGGCTGCCAGCCGGCGCCACCGCC
GGTGCCGGCGAAACCGGTCCCGGATAACTCCTCTTTCTTCGACCCTTGCTATTGGGCTTATTGTGGAGAAGGAAAGTGTGTGAAGAACATGACTTATATACACACATGTG
AATGCAACCCTGGCTACTACAATCTCCTCAACACTTCTGCCTTCCCTTGCTATAGTGATTGTACTATTGGATCAGATTGTGCAAAGCTTGGGATTAAAGTTGCAAATGTG
AATGCTACGGGTAATGGAAGTGGTTCTGGCAATGGCACTGGACAAGGAAACTCGATTATTCCACCAGGAAAGTTTCAGTGGGCAGCTATAGCAATTTTATTTGCCATGGC
TATGGAGCTTTGGAACTAGAACATCCTTGAATATTCATTTTGGTTGTCACACTGTTTTTGTTTCATATAGATTTATTCTTATATCTTATGTTTGGAGTTTGGTATATATA
ATAAATAAATCACATCTTTACTCTTTTGTACAGATATTCATATTAATGTTATTTTATTATTAAT
Protein sequenceShow/hide protein sequence
MATSSHLAVDFLSIFLLLLLPISTVIADTPFPFLDKICEEVNCGKGNCTADARYPFGFICQCDSGWKRTRDNDDDLTFLPCVIPNCSLNYGCQPAPPPVPAKPVPDNSSF
FDPCYWAYCGEGKCVKNMTYIHTCECNPGYYNLLNTSAFPCYSDCTIGSDCAKLGIKVANVNATGNGSGSGNGTGQGNSIIPPGKFQWAAIAILFAMAMELWN