; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc02G17660 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G17660
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionpathogenesis-related protein PR-4-like
Genome locationClcChr02:30237265..30238002
RNA-Seq ExpressionClc02G17660
SyntenyClc02G17660
Gene Ontology termsGO:0042742 - defense response to bacterium (biological process)
GO:0050832 - defense response to fungus (biological process)
GO:0090501 - RNA phosphodiester bond hydrolysis (biological process)
GO:0004540 - ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6599312.1 hypothetical protein SDJN03_09090, partial [Cucurbita argyrosperma subsp. sororia]2.1e-7088.73Show/hide
Query:  MERGSIMMVLVLALGILSLANAQSATNVRATYHFYNPQDINWDYLRASVFCATWDANKPLEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTATGASEIV
        ME+ S +M+L LALG+LSLANAQSA NVRATYH YNPQDINWDYLRASVFCATWDANKP+EWRRQYGWTAFCGPVGPRGQASCGRCLRVTNT TG+SEIV
Subjt:  MERGSIMMVLVLALGILSLANAQSATNVRATYHFYNPQDINWDYLRASVFCATWDANKPLEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTATGASEIV

Query:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFQGHLIVNYEFVNC
        RIVDQCANGGLDLDVNVF+RIDTNGNG F+GHLIVNY+FVNC
Subjt:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFQGHLIVNYEFVNC

XP_004139239.1 pathogenesis-related protein PR-4 [Cucumis sativus]5.0e-7291.55Show/hide
Query:  MERGSIMMVLVLALGILSLANAQSATNVRATYHFYNPQDINWDYLRASVFCATWDANKPLEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTATGASEIV
        M +GSIMM+LVLALG+LSLANAQSATNVRATYH YNPQDINWDYLRASVFCATWDA+KPLEWRRQYGWTAFCGPVGPRG+ SCGRCLRVTNT TGASEIV
Subjt:  MERGSIMMVLVLALGILSLANAQSATNVRATYHFYNPQDINWDYLRASVFCATWDANKPLEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTATGASEIV

Query:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFQGHLIVNYEFVNC
        RIVDQCANGGLDLDVNVFRRIDTNGNGN +GHLIVNY+FVNC
Subjt:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFQGHLIVNYEFVNC

XP_008456018.1 PREDICTED: pathogenesis-related protein PR-4-like [Cucumis melo]4.5e-7392.25Show/hide
Query:  MERGSIMMVLVLALGILSLANAQSATNVRATYHFYNPQDINWDYLRASVFCATWDANKPLEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTATGASEIV
        ME+GSIMM+LVLALG+LSLANAQSATNVRATYH YNPQDINWDYLRASVFCATWDANKPLEWRR+YGWTAFCGPVGPRG+ SCGRCLRVTNT TGASEIV
Subjt:  MERGSIMMVLVLALGILSLANAQSATNVRATYHFYNPQDINWDYLRASVFCATWDANKPLEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTATGASEIV

Query:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFQGHLIVNYEFVNC
        RIVDQCANGGLDLDVNVFRRIDTNGNGNF+GHL VNY+FVNC
Subjt:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFQGHLIVNYEFVNC

XP_022946136.1 pathogenesis-related protein PR-4-like [Cucurbita moschata]3.2e-7190.14Show/hide
Query:  MERGSIMMVLVLALGILSLANAQSATNVRATYHFYNPQDINWDYLRASVFCATWDANKPLEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTATGASEIV
        ME+ SI+M+L LALG+LSLANAQSA NVRATYH YNPQDINWDYLRASVFCATWDANKP+EWRRQYGWTAFCGPVGPRGQASCGRCLRVTNT TGASEIV
Subjt:  MERGSIMMVLVLALGILSLANAQSATNVRATYHFYNPQDINWDYLRASVFCATWDANKPLEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTATGASEIV

Query:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFQGHLIVNYEFVNC
        RIVDQCANGGLDLDVNVF+RIDTNGNG F+GHLIVNY+FVNC
Subjt:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFQGHLIVNYEFVNC

XP_022999102.1 pathogenesis-related protein PR-4-like [Cucurbita maxima]6.5e-7290.85Show/hide
Query:  MERGSIMMVLVLALGILSLANAQSATNVRATYHFYNPQDINWDYLRASVFCATWDANKPLEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTATGASEIV
        ME+GS +M+L LALGILSLANAQSA NVRATYH YNPQDINWDYLRASVFCATWDANKP+EWRRQYGWTAFCGPVGPRGQASCGRCLRVTNT TGASEIV
Subjt:  MERGSIMMVLVLALGILSLANAQSATNVRATYHFYNPQDINWDYLRASVFCATWDANKPLEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTATGASEIV

Query:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFQGHLIVNYEFVNC
        RIVDQCANGGLDLDVNVF+RIDTNGNG F+GHLIVNY+FVNC
Subjt:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFQGHLIVNYEFVNC

TrEMBL top hitse value%identityAlignment
A0A0A0LIC8 Barwin domain-containing protein2.4e-7291.55Show/hide
Query:  MERGSIMMVLVLALGILSLANAQSATNVRATYHFYNPQDINWDYLRASVFCATWDANKPLEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTATGASEIV
        M +GSIMM+LVLALG+LSLANAQSATNVRATYH YNPQDINWDYLRASVFCATWDA+KPLEWRRQYGWTAFCGPVGPRG+ SCGRCLRVTNT TGASEIV
Subjt:  MERGSIMMVLVLALGILSLANAQSATNVRATYHFYNPQDINWDYLRASVFCATWDANKPLEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTATGASEIV

Query:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFQGHLIVNYEFVNC
        RIVDQCANGGLDLDVNVFRRIDTNGNGN +GHLIVNY+FVNC
Subjt:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFQGHLIVNYEFVNC

A0A1S3C3H6 pathogenesis-related protein PR-4-like2.2e-7392.25Show/hide
Query:  MERGSIMMVLVLALGILSLANAQSATNVRATYHFYNPQDINWDYLRASVFCATWDANKPLEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTATGASEIV
        ME+GSIMM+LVLALG+LSLANAQSATNVRATYH YNPQDINWDYLRASVFCATWDANKPLEWRR+YGWTAFCGPVGPRG+ SCGRCLRVTNT TGASEIV
Subjt:  MERGSIMMVLVLALGILSLANAQSATNVRATYHFYNPQDINWDYLRASVFCATWDANKPLEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTATGASEIV

Query:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFQGHLIVNYEFVNC
        RIVDQCANGGLDLDVNVFRRIDTNGNGNF+GHL VNY+FVNC
Subjt:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFQGHLIVNYEFVNC

A0A5D3D4G8 Pathogenesis-related protein PR-4-like2.2e-7392.25Show/hide
Query:  MERGSIMMVLVLALGILSLANAQSATNVRATYHFYNPQDINWDYLRASVFCATWDANKPLEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTATGASEIV
        ME+GSIMM+LVLALG+LSLANAQSATNVRATYH YNPQDINWDYLRASVFCATWDANKPLEWRR+YGWTAFCGPVGPRG+ SCGRCLRVTNT TGASEIV
Subjt:  MERGSIMMVLVLALGILSLANAQSATNVRATYHFYNPQDINWDYLRASVFCATWDANKPLEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTATGASEIV

Query:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFQGHLIVNYEFVNC
        RIVDQCANGGLDLDVNVFRRIDTNGNGNF+GHL VNY+FVNC
Subjt:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFQGHLIVNYEFVNC

A0A6J1G2U1 pathogenesis-related protein PR-4-like1.6e-7190.14Show/hide
Query:  MERGSIMMVLVLALGILSLANAQSATNVRATYHFYNPQDINWDYLRASVFCATWDANKPLEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTATGASEIV
        ME+ SI+M+L LALG+LSLANAQSA NVRATYH YNPQDINWDYLRASVFCATWDANKP+EWRRQYGWTAFCGPVGPRGQASCGRCLRVTNT TGASEIV
Subjt:  MERGSIMMVLVLALGILSLANAQSATNVRATYHFYNPQDINWDYLRASVFCATWDANKPLEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTATGASEIV

Query:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFQGHLIVNYEFVNC
        RIVDQCANGGLDLDVNVF+RIDTNGNG F+GHLIVNY+FVNC
Subjt:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFQGHLIVNYEFVNC

A0A6J1K9X1 pathogenesis-related protein PR-4-like3.2e-7290.85Show/hide
Query:  MERGSIMMVLVLALGILSLANAQSATNVRATYHFYNPQDINWDYLRASVFCATWDANKPLEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTATGASEIV
        ME+GS +M+L LALGILSLANAQSA NVRATYH YNPQDINWDYLRASVFCATWDANKP+EWRRQYGWTAFCGPVGPRGQASCGRCLRVTNT TGASEIV
Subjt:  MERGSIMMVLVLALGILSLANAQSATNVRATYHFYNPQDINWDYLRASVFCATWDANKPLEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTATGASEIV

Query:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFQGHLIVNYEFVNC
        RIVDQCANGGLDLDVNVF+RIDTNGNG F+GHLIVNY+FVNC
Subjt:  RIVDQCANGGLDLDVNVFRRIDTNGNGNFQGHLIVNYEFVNC

SwissProt top hitse value%identityAlignment
P09761 Wound-induced protein WIN13.7e-5476.47Show/hide
Query:  SATNVRATYHFYNPQDINWDYLRASVFCATWDANKPLEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTATGASEIVRIVDQCANGGLDLDVNVFRRIDT
        SA NVRATYH YNPQ++ WD    S +C+TWDANKPL WR++YGWTAFCGPVGPRG+ SCG+CLRVTNT TGA   VRIVDQC+NGGLDLDVNVFR+IDT
Subjt:  SATNVRATYHFYNPQDINWDYLRASVFCATWDANKPLEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTATGASEIVRIVDQCANGGLDLDVNVFRRIDT

Query:  NGNGNFQGHLIVNYEFVNC
        +GNGN QGHLIVNY+FV+C
Subjt:  NGNGNFQGHLIVNYEFVNC

P09762 Wound-induced protein WIN27.8e-5273.95Show/hide
Query:  SATNVRATYHFYNPQDINWDYLRASVFCATWDANKPLEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTATGASEIVRIVDQCANGGLDLDVNVFRRIDT
        SA NVRATYH YNPQ++ WD    S +C+TWDANKP  WR +YGWTAFCGPVGPRG+ SCG+CLRVTNT TGA   VRIVDQC+NGGLDLD+NVF++IDT
Subjt:  SATNVRATYHFYNPQDINWDYLRASVFCATWDANKPLEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTATGASEIVRIVDQCANGGLDLDVNVFRRIDT

Query:  NGNGNFQGHLIVNYEFVNC
        +G GN QGHLIVNY+FVNC
Subjt:  NGNGNFQGHLIVNYEFVNC

P29062 Pathogenesis-related protein PR-4A1.5e-5570.8Show/hide
Query:  IMMVLVLALGILSLANAQSATNVRATYHFYNPQDINWDYLRASVFCATWDANKPLEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTATGASEIVRIVDQ
        + + L++   ++++A AQSATNVR+TYH YNPQ+INWD   AS FCATWDA+KPL WR++YGWTAFCGP GPRGQ SCGRCLRVTNT TG    VRIVDQ
Subjt:  IMMVLVLALGILSLANAQSATNVRATYHFYNPQDINWDYLRASVFCATWDANKPLEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTATGASEIVRIVDQ

Query:  CANGGLDLDVNVFRRIDTNGNGNFQGHLIVNYEFVNC
        C+NGGLDLDVNVF ++DTNG G  QGHL VNYEFVNC
Subjt:  CANGGLDLDVNVFRRIDTNGNGNFQGHLIVNYEFVNC

P29063 Pathogenesis-related protein PR-4B6.8e-5671.53Show/hide
Query:  IMMVLVLALGILSLANAQSATNVRATYHFYNPQDINWDYLRASVFCATWDANKPLEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTATGASEIVRIVDQ
        + + L++   ++++A AQSATNVR+TYH YNPQ+INWD   AS FCATWDA+KPL WR++YGWTAFCGP GPRGQ SCGRCLRVTNT TG    VRIVDQ
Subjt:  IMMVLVLALGILSLANAQSATNVRATYHFYNPQDINWDYLRASVFCATWDANKPLEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTATGASEIVRIVDQ

Query:  CANGGLDLDVNVFRRIDTNGNGNFQGHLIVNYEFVNC
        C+NGGLDLDVNVF ++DTNG G  QGHLIVNYEFVNC
Subjt:  CANGGLDLDVNVFRRIDTNGNGNFQGHLIVNYEFVNC

P32045 Pathogenesis-related protein P22.3e-5672.03Show/hide
Query:  MERGSIMMVLVLALG-ILSLANAQSATNVRATYHFYNPQDINWDYLRASVFCATWDANKPLEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTATGASEI
        MER + + V    +  ++++A AQSATNVRATYH YNPQ+INWD   ASV+CATWDA+KPLEWRR+YGWTAFCGP GP GQASCGRCLRVTNT TG  E 
Subjt:  MERGSIMMVLVLALG-ILSLANAQSATNVRATYHFYNPQDINWDYLRASVFCATWDANKPLEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTATGASEI

Query:  VRIVDQCANGGLDLDVNVFRRIDTNGNGNFQGHLIVNYEFVNC
        VRIVDQC NGGLDLDVNVF R+DTNG G  +G+L VNYEFVNC
Subjt:  VRIVDQCANGGLDLDVNVFRRIDTNGNGNFQGHLIVNYEFVNC

Arabidopsis top hitse value%identityAlignment
AT3G04720.1 pathogenesis-related 46.4e-4969.17Show/hide
Query:  QSATNVRATYHFYNPQDINWDYLRASVFCATWDANKPLEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTATGASEIVRIVDQCANGGLDLDVNVFRRID
        +SA+NVRATYHFYNP   NWD    S +C+TWDA+KP  WR +YGWTAFCGP GPRGQASCG+CLRV NT T A+  VRIVDQC+NGGLDLDV +F +ID
Subjt:  QSATNVRATYHFYNPQDINWDYLRASVFCATWDANKPLEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTATGASEIVRIVDQCANGGLDLDVNVFRRID

Query:  TNGNGNFQGHLIVNYEFVNC
        T+G G  QGHLIV+Y+FV+C
Subjt:  TNGNGNFQGHLIVNYEFVNC


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAGAGGAAGTATTATGATGGTTTTGGTGTTGGCTTTGGGGATTTTGAGTTTGGCAAATGCTCAAAGTGCCACCAATGTGAGAGCTACTTATCATTTTTACAACCC
ACAAGATATTAATTGGGACTATCTTAGAGCAAGTGTTTTTTGTGCAACATGGGATGCTAACAAGCCTTTGGAGTGGCGCCGCCAGTATGGCTGGACCGCCTTTTGTGGCC
CTGTTGGCCCTCGTGGTCAAGCTTCTTGTGGACGTTGTTTGAGGGTGACCAACACTGCGACAGGAGCTTCAGAAATAGTGAGAATTGTTGATCAATGCGCTAATGGAGGG
TTAGATTTGGATGTGAATGTGTTTAGGAGGATTGACACTAATGGAAATGGAAACTTCCAAGGCCATCTTATTGTCAATTATGAGTTTGTCAATTGCTAA
mRNA sequenceShow/hide mRNA sequence
AAAAAAAAGCCTACAAACATATATAAGTGAGAAAGTTACTAGAGAGAATTAAGAAAGCAAAGAATGGAGAGAGGAAGTATTATGATGGTTTTGGTGTTGGCTTTGGGGAT
TTTGAGTTTGGCAAATGCTCAAAGTGCCACCAATGTGAGAGCTACTTATCATTTTTACAACCCACAAGATATTAATTGGGACTATCTTAGAGCAAGTGTTTTTTGTGCAA
CATGGGATGCTAACAAGCCTTTGGAGTGGCGCCGCCAGTATGGCTGGACCGCCTTTTGTGGCCCTGTTGGCCCTCGTGGTCAAGCTTCTTGTGGACGTTGTTTGAGGGTG
ACCAACACTGCGACAGGAGCTTCAGAAATAGTGAGAATTGTTGATCAATGCGCTAATGGAGGGTTAGATTTGGATGTGAATGTGTTTAGGAGGATTGACACTAATGGAAA
TGGAAACTTCCAAGGCCATCTTATTGTCAATTATGAGTTTGTCAATTGCTAAGATTTCTTGTTTAATTAAATTTCATTCTTCCTAGAAGAAGAAAGAAAATCATGTTGTA
ACGAATAAAGTACGAATAATAAAAAAGTATGAAATAAAGGTTTGTTTAAA
Protein sequenceShow/hide protein sequence
MERGSIMMVLVLALGILSLANAQSATNVRATYHFYNPQDINWDYLRASVFCATWDANKPLEWRRQYGWTAFCGPVGPRGQASCGRCLRVTNTATGASEIVRIVDQCANGG
LDLDVNVFRRIDTNGNGNFQGHLIVNYEFVNC