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Clc02G17850 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G17850
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr02:30394772..30395362
RNA-Seq ExpressionClc02G17850
SyntenyClc02G17850
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063581.1 hypothetical protein E6C27_scaffold329G00910 [Cucumis melo var. makuwa]2.7e-3680.18Show/hide
Query:  MASSLMKMAAFLFIFLCIFDASASRVLTGERWLPGPSVSIAVLRGPVPSSSRNPCSFIPGFSRGRCTLSEVEDGDAGVQGGSSAFPGLNADGFAAASMVN
        MA SL+K  AFLFIFL IFD S        RWLPG  V IAVLRGPVPSSSRNPCSFIPGFSRGRCTLSEV+DG A V GGSSAFPGLNADGFAAASMVN
Subjt:  MASSLMKMAAFLFIFLCIFDASASRVLTGERWLPGPSVSIAVLRGPVPSSSRNPCSFIPGFSRGRCTLSEVEDGDAGVQGGSSAFPGLNADGFAAASMVN

Query:  QTQKQNSSLSS
        QTQKQ+SSLSS
Subjt:  QTQKQNSSLSS

KAG6586324.1 hypothetical protein SDJN03_19057, partial [Cucurbita argyrosperma subsp. sororia]2.2e-2768.14Show/hide
Query:  MASSLMK--MAAFLFIFLCIFDASASRVLTGERWLPGPSVSIAVLRGPVPSSSRNPCSFIPGFSRGRCTLSEVED--GDAGVQGGSSAFPGLNADGFAAA
        M  S+MK   AAF+FI LCIF  SA+RVLTGERW P   VS  +LRG VP S RNPCSFIPG  RGRCTLSEVED  G  G  GGSSAFPG+N DGF+AA
Subjt:  MASSLMK--MAAFLFIFLCIFDASASRVLTGERWLPGPSVSIAVLRGPVPSSSRNPCSFIPGFSRGRCTLSEVED--GDAGVQGGSSAFPGLNADGFAAA

Query:  SMVNQTQKQNSSL
        +MVN TQKQ+ SL
Subjt:  SMVNQTQKQNSSL

KAG6599331.1 hypothetical protein SDJN03_09109, partial [Cucurbita argyrosperma subsp. sororia]5.4e-2977.27Show/hide
Query:  SASRVLTGERWLPGPSVSIAVLRGPVPSSSRNPCSFIPGFSRGRCTLSEVEDGDAGVQGGSSAFPGLNADGFAAASMVNQTQKQNSSL
        SA+RV+TGERWLP P V +A+LRG VPSSSRNPCSFIPGFSRGRCTLSE +DG A V GGSSA  GLNADGFAAASM N+TQK++ SL
Subjt:  SASRVLTGERWLPGPSVSIAVLRGPVPSSSRNPCSFIPGFSRGRCTLSEVEDGDAGVQGGSSAFPGLNADGFAAASMVNQTQKQNSSL

KGN60782.1 hypothetical protein Csa_019261 [Cucumis sativus]1.8e-4081.98Show/hide
Query:  MASSLMKMAAFLFIFLCIFDASASRVLTGERWLPGPSVSIAVLRGPVPSSSRNPCSFIPGFSRGRCTLSEVEDGDAGVQGGSSAFPGLNADGFAAASMVN
        MA SLMK  AFLFIFL I D SA+RVL GERWLPG  V  A+LRGPVPSSSRNPCSFIPGFSRGRCTLSEV++GDA V+GGSSAFPGLNADGFAAAS+VN
Subjt:  MASSLMKMAAFLFIFLCIFDASASRVLTGERWLPGPSVSIAVLRGPVPSSSRNPCSFIPGFSRGRCTLSEVEDGDAGVQGGSSAFPGLNADGFAAASMVN

Query:  QTQKQNSSLSS
        QTQKQ+SS+SS
Subjt:  QTQKQNSSLSS

XP_021888699.1 uncharacterized protein LOC110807772 [Carica papaya]5.2e-0838.74Show/hide
Query:  SSLMKMAAFLFIFLCIFD--ASASRVLTGERWLPGPSVSIAVLRGPVPSSSRNPCSFIPGFSRGRCTLSEVEDGDAGVQGGSSAFPGLNADGFAAA---S
        +++ K A  + +  C  +   +A R+L  E+WL    +  ++ RGPVP S  NPC+FIPG +RGRCTLSE++      +  ++AFP +  D  A     S
Subjt:  SSLMKMAAFLFIFLCIFD--ASASRVLTGERWLPGPSVSIAVLRGPVPSSSRNPCSFIPGFSRGRCTLSEVEDGDAGVQGGSSAFPGLNADGFAAA---S

Query:  MVNQTQKQNSS
          N+TQKQ+SS
Subjt:  MVNQTQKQNSS

TrEMBL top hitse value%identityAlignment
A0A0A0LJ84 Uncharacterized protein8.6e-4181.98Show/hide
Query:  MASSLMKMAAFLFIFLCIFDASASRVLTGERWLPGPSVSIAVLRGPVPSSSRNPCSFIPGFSRGRCTLSEVEDGDAGVQGGSSAFPGLNADGFAAASMVN
        MA SLMK  AFLFIFL I D SA+RVL GERWLPG  V  A+LRGPVPSSSRNPCSFIPGFSRGRCTLSEV++GDA V+GGSSAFPGLNADGFAAAS+VN
Subjt:  MASSLMKMAAFLFIFLCIFDASASRVLTGERWLPGPSVSIAVLRGPVPSSSRNPCSFIPGFSRGRCTLSEVEDGDAGVQGGSSAFPGLNADGFAAASMVN

Query:  QTQKQNSSLSS
        QTQKQ+SS+SS
Subjt:  QTQKQNSSLSS

A0A5A7VCY2 Uncharacterized protein1.3e-3680.18Show/hide
Query:  MASSLMKMAAFLFIFLCIFDASASRVLTGERWLPGPSVSIAVLRGPVPSSSRNPCSFIPGFSRGRCTLSEVEDGDAGVQGGSSAFPGLNADGFAAASMVN
        MA SL+K  AFLFIFL IFD S        RWLPG  V IAVLRGPVPSSSRNPCSFIPGFSRGRCTLSEV+DG A V GGSSAFPGLNADGFAAASMVN
Subjt:  MASSLMKMAAFLFIFLCIFDASASRVLTGERWLPGPSVSIAVLRGPVPSSSRNPCSFIPGFSRGRCTLSEVEDGDAGVQGGSSAFPGLNADGFAAASMVN

Query:  QTQKQNSSLSS
        QTQKQ+SSLSS
Subjt:  QTQKQNSSLSS

A0A5B6Z7Q1 Uncharacterized protein (Fragment)1.6e-0743.14Show/hide
Query:  LFIFLCIFDASASRVLTGERWLPGPSVSIAVLRGPVPSSSRNPCSFIPGFSRGRCTLSEVEDGDAG-----VQGGSSAFPGLNADGFAAASMVNQTQKQN
        +F  LC    SA R L  E+WL       ++ RGPVPSS  NPC++IPG   GRCTL+E E   AG          +AFP      FAAAS  N T+K++
Subjt:  LFIFLCIFDASASRVLTGERWLPGPSVSIAVLRGPVPSSSRNPCSFIPGFSRGRCTLSEVEDGDAG-----VQGGSSAFPGLNADGFAAASMVNQTQKQN

Query:  SS
        +S
Subjt:  SS

A0A5B6Z868 Uncharacterized protein3.1e-0646.59Show/hide
Query:  SASRVLTGERWLPGPSVSIAVLRGPVPSSSRNPCSFIPGFSRGRCTLSEVEDGDAG--VQGGSSAFPGLNADGFAAASMVNQTQKQNS
        SA R L  E+ L       ++ RGPVPSS  NPC++IPG   GRCTL+E E   AG  V     AFP    + FAAAS  N TQK+++
Subjt:  SASRVLTGERWLPGPSVSIAVLRGPVPSSSRNPCSFIPGFSRGRCTLSEVEDGDAG--VQGGSSAFPGLNADGFAAASMVNQTQKQNS

A0A6A4KR04 Uncharacterized protein (Fragment)2.8e-0743.81Show/hide
Query:  FLFIFLCIF---DASASRVLTGERWLPG-PSVSIAVL-RGPVPSSSRNPCSFIPGFSRGRCTLSEVEDGDAGVQGGSS--AFPGLNADGFAAASMVNQTQ
        F+F  L +F   +  A+R L GE WL    +++I  L RGPV  S  NPC++IPG  RGRCTL+E E   +G  G ++  AFPG+    FA AS  N ++
Subjt:  FLFIFLCIF---DASASRVLTGERWLPG-PSVSIAVL-RGPVPSSSRNPCSFIPGFSRGRCTLSEVEDGDAGVQGGSS--AFPGLNADGFAAASMVNQTQ

Query:  KQNSS
        KQ+ S
Subjt:  KQNSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTTCTCTTATGAAGATGGCTGCCTTTCTTTTCATTTTTCTTTGTATTTTCGACGCGTCAGCCTCAAGGGTCTTGACCGGAGAGCGGTGGCTTCCGGGGCCGAG
TGTTTCCATCGCGGTGCTGCGAGGTCCCGTGCCTAGTTCCAGTAGGAATCCATGTTCCTTTATTCCGGGGTTCAGCCGAGGCCGGTGTACGTTGAGCGAGGTGGAAGATG
GTGATGCCGGTGTCCAAGGTGGCTCCTCCGCCTTCCCTGGCCTGAATGCTGATGGGTTTGCCGCGGCTTCTATGGTTAACCAAACCCAGAAGCAAAATTCTTCTTTGAGC
TCTTGA
mRNA sequenceShow/hide mRNA sequence
AACCAATATTTTTCCTCTTTTCTTCTCTCATAATGGCTTCTTCTCTTATGAAGATGGCTGCCTTTCTTTTCATTTTTCTTTGTATTTTCGACGCGTCAGCCTCAAGGGTC
TTGACCGGAGAGCGGTGGCTTCCGGGGCCGAGTGTTTCCATCGCGGTGCTGCGAGGTCCCGTGCCTAGTTCCAGTAGGAATCCATGTTCCTTTATTCCGGGGTTCAGCCG
AGGCCGGTGTACGTTGAGCGAGGTGGAAGATGGTGATGCCGGTGTCCAAGGTGGCTCCTCCGCCTTCCCTGGCCTGAATGCTGATGGGTTTGCCGCGGCTTCTATGGTTA
ACCAAACCCAGAAGCAAAATTCTTCTTTGAGCTCTTGATGAATAATATATGATTTTCTGTATAGTTTTCTTTATACAAAGTTTTCCTTTTTCATATTTAATTTAATTAAT
TTTTTTTAATGAGTGAGACTGATGATGTAATTGGATTGGCCAAAATTGACCATTCTTTTGTTTCTTAAATCACCAAGGAATTGTTGAATATGAAATGCTGTGGAGTTTCA
AAGAAAACATGTTTGTTGATGATGCGCTAATAGTAATGAAA
Protein sequenceShow/hide protein sequence
MASSLMKMAAFLFIFLCIFDASASRVLTGERWLPGPSVSIAVLRGPVPSSSRNPCSFIPGFSRGRCTLSEVEDGDAGVQGGSSAFPGLNADGFAAASMVNQTQKQNSSLS
S