; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc02G17860 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G17860
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionGRF1-interacting factor 1
Genome locationClcChr02:30401471..30405497
RNA-Seq ExpressionClc02G17860
SyntenyClc02G17860
Gene Ontology termsGO:0008283 - cell population proliferation (biological process)
GO:0045944 - positive regulation of transcription by RNA polymerase II (biological process)
GO:0048316 - seed development (biological process)
GO:0048366 - leaf development (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003713 - transcription coactivator activity (molecular function)
InterPro domainsIPR007726 - SS18, N-terminal
IPR044779 - SS18 family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651552.1 hypothetical protein Csa_019498 [Cucumis sativus]2.7e-10083.33Show/hide
Query:  MQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQRTLGCRNHFHYIHFSSNTHFGHDC
        MQMQPMMAAYY NNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQ                        
Subjt:  MQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQRTLGCRNHFHYIHFSSNTHFGHDC

Query:  DLKLEFFKAYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTLQQQALHGQLGMNSGGGIGFNMLQNDATNAGGGNGAL--GGGFPDFGH
                 YSSSG+IQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTLQQQALHGQLGM+SGGGIGFNMLQNDA NAGGGNG    GGGFPDFGH
Subjt:  DLKLEFFKAYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTLQQQALHGQLGMNSGGGIGFNMLQNDATNAGGGNGAL--GGGFPDFGH

Query:  GAAGDSLHRSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN
        GAA DSLHRSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN
Subjt:  GAAGDSLHRSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN

XP_004139249.1 GRF1-interacting factor 1 isoform X2 [Cucumis sativus]4.4e-10383.66Show/hide
Query:  MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQRTLGCRNHFHYIHFSSNTH
        MQQHLMQMQPMMAAYY NNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQ                   
Subjt:  MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQRTLGCRNHFHYIHFSSNTH

Query:  FGHDCDLKLEFFKAYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTLQQQALHGQLGMNSGGGIGFNMLQNDATNAGGGNGAL--GGGF
                      YSSSG+IQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTLQQQALHGQLGM+SGGGIGFNMLQNDA NAGGGNG    GGGF
Subjt:  FGHDCDLKLEFFKAYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTLQQQALHGQLGMNSGGGIGFNMLQNDATNAGGGNGAL--GGGF

Query:  PDFGHGAAGDSLHRSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN
        PDFGHGAA DSLHRSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN
Subjt:  PDFGHGAAGDSLHRSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN

XP_008456296.1 PREDICTED: GRF1-interacting factor 1 [Cucumis melo]7.5e-10383.66Show/hide
Query:  MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQRTLGCRNHFHYIHFSSNTH
        MQQHLMQMQPMMAAYY NNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQ                   
Subjt:  MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQRTLGCRNHFHYIHFSSNTH

Query:  FGHDCDLKLEFFKAYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTLQQQALHGQLGMNSGGGIGFNMLQNDATNAGGGNGAL--GGGF
                      YSSSG+IQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTLQQQALHGQLGM+SGGGIGFNMLQNDA NAGGGNG    GGGF
Subjt:  FGHDCDLKLEFFKAYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTLQQQALHGQLGMNSGGGIGFNMLQNDATNAGGGNGAL--GGGF

Query:  PDFGHGAAGDSLHRSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN
        PDFGHGAA DSLHRSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN
Subjt:  PDFGHGAAGDSLHRSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN

XP_022937932.1 GRF1-interacting factor 1-like [Cucurbita moschata]2.1e-10081.71Show/hide
Query:  MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQRTLGCRNHFHYIHFSSNTH
        MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQ                   
Subjt:  MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQRTLGCRNHFHYIHFSSNTH

Query:  FGHDCDLKLEFFKAYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTLQQQALHGQLGMNSGGGIGFNMLQNDATNAGGGNGAL--GGGF
                      YSSSG+IQPGGHYIQHQQAQQMTPQSLMAARSSMLY+QQPFS+LQQQALH QLGM+SGGGIGFNMLQNDA NAGG  GAL  GGGF
Subjt:  FGHDCDLKLEFFKAYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTLQQQALHGQLGMNSGGGIGFNMLQNDATNAGGGNGAL--GGGF

Query:  PDFGHGAAGDSLHRSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN
        PDF H AA DSLHRSLAGGSKQDMGGTGS EGRGGSSGSHGGDGGETLYLKSADDGN
Subjt:  PDFGHGAAGDSLHRSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN

XP_022965913.1 GRF1-interacting factor 1-like [Cucurbita maxima]1.6e-10082.03Show/hide
Query:  MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQRTLGCRNHFHYIHFSSNTH
        MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQ                   
Subjt:  MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQRTLGCRNHFHYIHFSSNTH

Query:  FGHDCDLKLEFFKAYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTLQQQALHGQLGMNSGGGIGFNMLQNDATNAGGGNGAL-GGGFP
                      YSSSG+IQPGGHYIQHQQAQQMTPQSLMAARSSMLY+QQPFS+LQQQALH QLGM+SGGGIGFNMLQNDA NAGG  GAL GGGFP
Subjt:  FGHDCDLKLEFFKAYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTLQQQALHGQLGMNSGGGIGFNMLQNDATNAGGGNGAL-GGGFP

Query:  DFGHGAAGDSLHRSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN
        DF H AA DSLHRSLAGGSKQDMGGTGS EGRGGSSGSHGGDGGETLYLKSADDGN
Subjt:  DFGHGAAGDSLHRSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN

TrEMBL top hitse value%identityAlignment
A0A0A0LL92 SSXT domain-containing protein2.1e-10383.66Show/hide
Query:  MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQRTLGCRNHFHYIHFSSNTH
        MQQHLMQMQPMMAAYY NNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQ                   
Subjt:  MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQRTLGCRNHFHYIHFSSNTH

Query:  FGHDCDLKLEFFKAYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTLQQQALHGQLGMNSGGGIGFNMLQNDATNAGGGNGAL--GGGF
                      YSSSG+IQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTLQQQALHGQLGM+SGGGIGFNMLQNDA NAGGGNG    GGGF
Subjt:  FGHDCDLKLEFFKAYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTLQQQALHGQLGMNSGGGIGFNMLQNDATNAGGGNGAL--GGGF

Query:  PDFGHGAAGDSLHRSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN
        PDFGHGAA DSLHRSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN
Subjt:  PDFGHGAAGDSLHRSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN

A0A1S3C305 GRF1-interacting factor 13.7e-10383.66Show/hide
Query:  MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQRTLGCRNHFHYIHFSSNTH
        MQQHLMQMQPMMAAYY NNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQ                   
Subjt:  MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQRTLGCRNHFHYIHFSSNTH

Query:  FGHDCDLKLEFFKAYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTLQQQALHGQLGMNSGGGIGFNMLQNDATNAGGGNGAL--GGGF
                      YSSSG+IQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTLQQQALHGQLGM+SGGGIGFNMLQNDA NAGGGNG    GGGF
Subjt:  FGHDCDLKLEFFKAYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTLQQQALHGQLGMNSGGGIGFNMLQNDATNAGGGNGAL--GGGF

Query:  PDFGHGAAGDSLHRSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN
        PDFGHGAA DSLHRSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN
Subjt:  PDFGHGAAGDSLHRSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN

A0A6J1CPL3 GRF1-interacting factor 11.3e-9780.62Show/hide
Query:  MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQRTLGCRNHFHYIHFSSNTH
        MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQ                   
Subjt:  MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQRTLGCRNHFHYIHFSSNTH

Query:  FGHDCDLKLEFFKAYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTL-QQQALHGQLGMNSGGGIGFNMLQNDATNAGGGN-GALG-GG
                      YSSSG++QPGGHY+QHQQAQQMTPQSLMAARSSMLY QQ FS L QQQALH QLGM+SGGGIGFNMLQND +NAGGGN GALG GG
Subjt:  FGHDCDLKLEFFKAYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTL-QQQALHGQLGMNSGGGIGFNMLQNDATNAGGGN-GALG-GG

Query:  FPDFGHGAAGDSLHRSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN
        FPDFGH AAGDSLHR LAGGSKQDMG TGSAEGRGGSSGSHGGDGGETLYLK+ADDGN
Subjt:  FPDFGHGAAGDSLHRSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN

A0A6J1FCK8 GRF1-interacting factor 1-like9.9e-10181.71Show/hide
Query:  MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQRTLGCRNHFHYIHFSSNTH
        MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQ                   
Subjt:  MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQRTLGCRNHFHYIHFSSNTH

Query:  FGHDCDLKLEFFKAYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTLQQQALHGQLGMNSGGGIGFNMLQNDATNAGGGNGAL--GGGF
                      YSSSG+IQPGGHYIQHQQAQQMTPQSLMAARSSMLY+QQPFS+LQQQALH QLGM+SGGGIGFNMLQNDA NAGG  GAL  GGGF
Subjt:  FGHDCDLKLEFFKAYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTLQQQALHGQLGMNSGGGIGFNMLQNDATNAGGGNGAL--GGGF

Query:  PDFGHGAAGDSLHRSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN
        PDF H AA DSLHRSLAGGSKQDMGGTGS EGRGGSSGSHGGDGGETLYLKSADDGN
Subjt:  PDFGHGAAGDSLHRSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN

A0A6J1HQC1 GRF1-interacting factor 1-like7.6e-10182.03Show/hide
Query:  MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQRTLGCRNHFHYIHFSSNTH
        MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQ                   
Subjt:  MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQRTLGCRNHFHYIHFSSNTH

Query:  FGHDCDLKLEFFKAYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTLQQQALHGQLGMNSGGGIGFNMLQNDATNAGGGNGAL-GGGFP
                      YSSSG+IQPGGHYIQHQQAQQMTPQSLMAARSSMLY+QQPFS+LQQQALH QLGM+SGGGIGFNMLQNDA NAGG  GAL GGGFP
Subjt:  FGHDCDLKLEFFKAYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTLQQQALHGQLGMNSGGGIGFNMLQNDATNAGGGNGAL-GGGFP

Query:  DFGHGAAGDSLHRSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN
        DF H AA DSLHRSLAGGSKQDMGGTGS EGRGGSSGSHGGDGGETLYLKSADDGN
Subjt:  DFGHGAAGDSLHRSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN

SwissProt top hitse value%identityAlignment
A5HEH4 GRF-interacting factor 19.5e-3243.54Show/hide
Query:  QQHLMQM-QPMMAAY-YPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQRTLGCRNHFHYIHFSSNT
        QQHLMQM Q MM  Y  P  VTTD IQQYLDENK LIL I+++QN+GK  EC  +QA+LQ NLMYLAAIADSQP  +A  +Q                  
Subjt:  QQHLMQM-QPMMAAY-YPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQRTLGCRNHFHYIHFSSNT

Query:  HFGHDCDLKLEFFKAYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTL-QQQALHGQLGMNSGGG-----IGFNMLQNDATNAGGGNGA
                       Y S+ ++QPG  Y+  Q  Q M PQSLMAARSSM+Y+    S L QQQA HGQLGM  GGG      GF++L  +A+  GGG GA
Subjt:  HFGHDCDLKLEFFKAYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTL-QQQALHGQLGMNSGGG-----IGFNMLQNDATNAGGGNGA

Query:  LGGGFPDFGHGAAGDSLHRSLAGGSKQDMGGTGSAEG--------RGG-SSGSHGGDGGETLYLKSADDGN
                  GA  + ++  +  G  +   G+G+ EG        RGG SSG+  GD GE L + + ++G+
Subjt:  LGGGFPDFGHGAAGDSLHRSLAGGSKQDMGGTGSAEG--------RGG-SSGSHGGDGGETLYLKSADDGN

Q6AVI1 GRF-interacting factor 11.4e-3545.72Show/hide
Query:  QQHLMQM-QPMMAAY-YPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQRTLGCRNHFHYIHFSSNT
        QQHLMQM Q MM  Y  P  VTTD IQQYLDENK LIL I+++QN+GK+ ECA NQA+LQ NLMYLAAIADSQP  +A  +Q                  
Subjt:  QQHLMQM-QPMMAAY-YPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQRTLGCRNHFHYIHFSSNT

Query:  HFGHDCDLKLEFFKAYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTLQQQ------ALHGQLGMNSGGGI-GFNMLQNDATNAGGGNG
                       Y S+ ++Q G  Y+  Q AQ M PQSLMAARSSM+Y+Q   S LQQQ      A HGQLGM SGG   GF++L  +A+  GGG G
Subjt:  HFGHDCDLKLEFFKAYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTLQQQ------ALHGQLGMNSGGGI-GFNMLQNDATNAGGGNG

Query:  ALGGG-------FPDFGHGAAGDSLHRSLAGGSKQDMGGTG-SAEGRGGSSGSHGGDGGETLYLKSADD
           G        F DFG G           GG K+  G T  S + RG +SG+  GDG    YLK  ++
Subjt:  ALGGG-------FPDFGHGAAGDSLHRSLAGGSKQDMGGTG-SAEGRGGSSGSHGGDGGETLYLKSADD

Q8L8A5 GRF1-interacting factor 11.7e-5756.67Show/hide
Query:  MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQRTLGCRNHFHYIHFSSNTH
        MQQHLMQMQPMMA YYP+NVT+DHIQQYLDENKSLILKIVESQNSGKL+ECAENQARLQRNLMYLAAIADSQPQP ++H+Q                   
Subjt:  MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQRTLGCRNHFHYIHFSSNTH

Query:  FGHDCDLKLEFFKAYSSSGIIQ--PGGHYIQHQQA---QQMTPQSLMAARSSMLYS-----QQPFSTLQQQAL-HGQLGMNS----GGGIGFNMLQNDAT
        +G             +  G+IQ   G HY+Q QQA   QQMT QSLMAARSSMLY+     QQP++TLQ Q L H QLGM+S    GG  G ++LQ +A 
Subjt:  FGHDCDLKLEFFKAYSSSGIIQ--PGGHYIQHQQA---QQMTPQSLMAARSSMLYS-----QQPFSTLQQQAL-HGQLGMNS----GGGIGFNMLQNDAT

Query:  NAGGGNGALGGGFPDFGHGAAGDSLHRSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN
                  GGF DFG G              K +MG  G  EGRGGSS    GDGGETLYLKS+DDGN
Subjt:  NAGGGNGALGGGFPDFGHGAAGDSLHRSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN

Q93VH6 GRF1-interacting factor 34.1e-1935.25Show/hide
Query:  QHLMQMQPMMAAYYP--NNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQRTLGCRNHFHYIHFSSNTH
        Q   QM PM+   +P  NN+TT+ IQ+YLDENK LI+ I+E+QN GKL ECA+ QA LQ+NLMYLAAIAD+QPQP A  A  T G               
Subjt:  QHLMQMQPMMAAYYP--NNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQRTLGCRNHFHYIHFSSNTH

Query:  FGHDCDLKLEFFKAYSSSGIIQPGGHYIQHQQA---QQMTPQSLMAARSSMLYSQ-----QPFSTLQQQALHGQ-----LGMNSGGGIGFNMLQND---A
                     A + S +  P  +++Q  QA    Q  P  +   R  + +        P   L QQA+ G      +G+N+  G+   M  ++   A
Subjt:  FGHDCDLKLEFFKAYSSSGIIQPGGHYIQHQQA---QQMTPQSLMAARSSMLYSQ-----QPFSTLQQQALHGQ-----LGMNSGGGIGFNMLQND---A

Query:  TNAGGGNGALGGGFPDFGHGAAGDSLHRSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGET
         N  G N A GGG PD                G+     G   A+G+GGS+  HGG   +T
Subjt:  TNAGGGNGALGGGFPDFGHGAAGDSLHRSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGET

Q9MAL9 GRF1-interacting factor 21.0e-1736.89Show/hide
Query:  QQHLMQMQPMMAAYYP-NNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQRTLGCRNHFHYIHFSSNTH
        QQ   QM PM+ +  P NN+TT+ IQ+YLDENK LI+ I+E+QN GKL ECA+ QA LQ+NLMYLAAIAD+QP P                         
Subjt:  QQHLMQMQPMMAAYYP-NNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQRTLGCRNHFHYIHFSSNTH

Query:  FGHDCDLKLEFFKAYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQ-------QPFSTLQQQALHGQLGMNSGGGIGFNM---LQNDATNAGGG
         G      +    A   SG +QP  +++QH QA   +P  + A R  + +         Q    + QQA+ G +G+   G     M   +Q   T  GG 
Subjt:  FGHDCDLKLEFFKAYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQ-------QPFSTLQQQALHGQLGMNSGGGIGFNM---LQNDATNAGGG

Query:  NGALGG
         G  GG
Subjt:  NGALGG

Arabidopsis top hitse value%identityAlignment
AT1G01160.1 GRF1-interacting factor 27.2e-1936.89Show/hide
Query:  QQHLMQMQPMMAAYYP-NNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQRTLGCRNHFHYIHFSSNTH
        QQ   QM PM+ +  P NN+TT+ IQ+YLDENK LI+ I+E+QN GKL ECA+ QA LQ+NLMYLAAIAD+QP P                         
Subjt:  QQHLMQMQPMMAAYYP-NNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQRTLGCRNHFHYIHFSSNTH

Query:  FGHDCDLKLEFFKAYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQ-------QPFSTLQQQALHGQLGMNSGGGIGFNM---LQNDATNAGGG
         G      +    A   SG +QP  +++QH QA   +P  + A R  + +         Q    + QQA+ G +G+   G     M   +Q   T  GG 
Subjt:  FGHDCDLKLEFFKAYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQ-------QPFSTLQQQALHGQLGMNSGGGIGFNM---LQNDATNAGGG

Query:  NGALGG
         G  GG
Subjt:  NGALGG

AT1G01160.2 GRF1-interacting factor 21.2e-1331.67Show/hide
Query:  QQHLMQMQPMMAAYYP-NNVTTDHIQQ----------------------------------YLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLA
        QQ   QM PM+ +  P NN+TT+ IQ+                                  YLDENK LI+ I+E+QN GKL ECA+ QA LQ+NLMYLA
Subjt:  QQHLMQMQPMMAAYYP-NNVTTDHIQQ----------------------------------YLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLA

Query:  AIADSQPQPSAMHAQRTLGCRNHFHYIHFSSNTHFGHDCDLKLEFFKAYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQ-------QPFSTLQ
        AIAD+QP P                          G      +    A   SG +QP  +++QH QA   +P  + A R  + +         Q    + 
Subjt:  AIADSQPQPSAMHAQRTLGCRNHFHYIHFSSNTHFGHDCDLKLEFFKAYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQ-------QPFSTLQ

Query:  QQALHGQLGMNSGGGIGFNM---LQNDATNAGGGNGALGG
        QQA+ G +G+   G     M   +Q   T  GG  G  GG
Subjt:  QQALHGQLGMNSGGGIGFNM---LQNDATNAGGGNGALGG

AT4G00850.1 GRF1-interacting factor 32.9e-2035.25Show/hide
Query:  QHLMQMQPMMAAYYP--NNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQRTLGCRNHFHYIHFSSNTH
        Q   QM PM+   +P  NN+TT+ IQ+YLDENK LI+ I+E+QN GKL ECA+ QA LQ+NLMYLAAIAD+QPQP A  A  T G               
Subjt:  QHLMQMQPMMAAYYP--NNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQRTLGCRNHFHYIHFSSNTH

Query:  FGHDCDLKLEFFKAYSSSGIIQPGGHYIQHQQA---QQMTPQSLMAARSSMLYSQ-----QPFSTLQQQALHGQ-----LGMNSGGGIGFNMLQND---A
                     A + S +  P  +++Q  QA    Q  P  +   R  + +        P   L QQA+ G      +G+N+  G+   M  ++   A
Subjt:  FGHDCDLKLEFFKAYSSSGIIQPGGHYIQHQQA---QQMTPQSLMAARSSMLYSQ-----QPFSTLQQQALHGQ-----LGMNSGGGIGFNMLQND---A

Query:  TNAGGGNGALGGGFPDFGHGAAGDSLHRSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGET
         N  G N A GGG PD                G+     G   A+G+GGS+  HGG   +T
Subjt:  TNAGGGNGALGGGFPDFGHGAAGDSLHRSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGET

AT5G28640.1 SSXT family protein1.2e-5856.67Show/hide
Query:  MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQRTLGCRNHFHYIHFSSNTH
        MQQHLMQMQPMMA YYP+NVT+DHIQQYLDENKSLILKIVESQNSGKL+ECAENQARLQRNLMYLAAIADSQPQP ++H+Q                   
Subjt:  MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQRTLGCRNHFHYIHFSSNTH

Query:  FGHDCDLKLEFFKAYSSSGIIQ--PGGHYIQHQQA---QQMTPQSLMAARSSMLYS-----QQPFSTLQQQAL-HGQLGMNS----GGGIGFNMLQNDAT
        +G             +  G+IQ   G HY+Q QQA   QQMT QSLMAARSSMLY+     QQP++TLQ Q L H QLGM+S    GG  G ++LQ +A 
Subjt:  FGHDCDLKLEFFKAYSSSGIIQ--PGGHYIQHQQA---QQMTPQSLMAARSSMLYS-----QQPFSTLQQQAL-HGQLGMNS----GGGIGFNMLQNDAT

Query:  NAGGGNGALGGGFPDFGHGAAGDSLHRSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN
                  GGF DFG G              K +MG  G  EGRGGSS    GDGGETLYLKS+DDGN
Subjt:  NAGGGNGALGGGFPDFGHGAAGDSLHRSLAGGSKQDMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGCAGCACCTGATGCAGATGCAGCCCATGATGGCAGCCTATTATCCCAACAACGTCACTACTGATCACATTCAACAGTATCTGGATGAGAACAAGTCGCTGATATT
GAAGATTGTTGAAAGCCAAAACTCGGGAAAATTGAATGAATGTGCAGAGAATCAAGCTAGGCTACAGAGAAACCTCATGTACCTGGCTGCCATTGCTGATTCTCAACCTC
AACCTTCTGCCATGCATGCCCAGAGAACTCTTGGCTGTAGGAACCATTTCCACTACATACATTTTTCCTCCAACACTCACTTTGGCCACGATTGTGATCTGAAACTCGAG
TTCTTCAAGGCCTACTCTTCCAGTGGCATAATCCAACCAGGAGGGCATTACATTCAGCACCAACAAGCTCAGCAGATGACGCCACAATCTCTGATGGCCGCCCGGTCCTC
TATGTTGTACTCTCAGCAGCCATTTTCGACACTGCAGCAGCAAGCTTTGCACGGCCAACTCGGGATGAACTCCGGAGGAGGCATAGGATTCAATATGCTGCAAAATGATG
CCACCAATGCAGGAGGAGGAAATGGAGCACTCGGAGGAGGCTTTCCAGATTTTGGCCATGGTGCTGCAGGTGACAGCTTGCACCGGAGCCTAGCCGGTGGGAGCAAGCAA
GATATGGGAGGAACCGGTTCTGCCGAGGGACGAGGAGGGAGCTCCGGGAGCCATGGTGGTGATGGAGGCGAGACTCTCTACTTGAAATCAGCTGATGATGGGAACTGA
mRNA sequenceShow/hide mRNA sequence
AAAAAAAAAAAGAAACCCAAAAGCAAGGGGGCATCTCGAATCAGCCGTTTCTGTGAAAAACTCATCATTCTTATTACACAAATGCAGCAGCACCTGATGCAGATGCAGCC
CATGATGGCAGCCTATTATCCCAACAACGTCACTACTGATCACATTCAACAGTATCTGGATGAGAACAAGTCGCTGATATTGAAGATTGTTGAAAGCCAAAACTCGGGAA
AATTGAATGAATGTGCAGAGAATCAAGCTAGGCTACAGAGAAACCTCATGTACCTGGCTGCCATTGCTGATTCTCAACCTCAACCTTCTGCCATGCATGCCCAGAGAACT
CTTGGCTGTAGGAACCATTTCCACTACATACATTTTTCCTCCAACACTCACTTTGGCCACGATTGTGATCTGAAACTCGAGTTCTTCAAGGCCTACTCTTCCAGTGGCAT
AATCCAACCAGGAGGGCATTACATTCAGCACCAACAAGCTCAGCAGATGACGCCACAATCTCTGATGGCCGCCCGGTCCTCTATGTTGTACTCTCAGCAGCCATTTTCGA
CACTGCAGCAGCAAGCTTTGCACGGCCAACTCGGGATGAACTCCGGAGGAGGCATAGGATTCAATATGCTGCAAAATGATGCCACCAATGCAGGAGGAGGAAATGGAGCA
CTCGGAGGAGGCTTTCCAGATTTTGGCCATGGTGCTGCAGGTGACAGCTTGCACCGGAGCCTAGCCGGTGGGAGCAAGCAAGATATGGGAGGAACCGGTTCTGCCGAGGG
ACGAGGAGGGAGCTCCGGGAGCCATGGTGGTGATGGAGGCGAGACTCTCTACTTGAAATCAGCTGATGATGGGAACTGAAAGTATGAGGAAAAAGTTGCCTTGTTCAGTG
AGTTGATGGTAGAAAACTAGGTACAATAGAAATTAGGAAGATAAAAGAAGAGAAGAAACCTTCTTACTAAAAAAGCTCTTGCTTTATCTTATGTGTAAACAATGGTGTGA
GGATTCAAACCTCATAAAACTTTGACCTTTGGTGTCCTTTTTCCATGTTAAGATATGTGCCTGTAGTGTATTATGTAAATTTTCTTCTCTTCTATGCTATCCCTTGCTCA
CTTCTTTT
Protein sequenceShow/hide protein sequence
MQQHLMQMQPMMAAYYPNNVTTDHIQQYLDENKSLILKIVESQNSGKLNECAENQARLQRNLMYLAAIADSQPQPSAMHAQRTLGCRNHFHYIHFSSNTHFGHDCDLKLE
FFKAYSSSGIIQPGGHYIQHQQAQQMTPQSLMAARSSMLYSQQPFSTLQQQALHGQLGMNSGGGIGFNMLQNDATNAGGGNGALGGGFPDFGHGAAGDSLHRSLAGGSKQ
DMGGTGSAEGRGGSSGSHGGDGGETLYLKSADDGN