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Clc02G18170 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G18170
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr02:30762538..30763638
RNA-Seq ExpressionClc02G18170
SyntenyClc02G18170
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB2023999.1 hypothetical protein ES319_D06G057400v1 [Gossypium barbadense]1.9e-0440.23Show/hide
Query:  SMAVLLLFLI-MSQAQGIRLLE--KGINKEYKKNGAVLGGKNG--GDLLMTMKKRAPIRALRKPYSHWLPGIQEDYHGPRSHKSRHH
        ++++L+LF+I +S  QGIRL +  K    +  + GA++   NG  GD+L+  +        RK + HWLP I EDY+GPR H+ RHH
Subjt:  SMAVLLLFLI-MSQAQGIRLLE--KGINKEYKKNGAVLGGKNG--GDLLMTMKKRAPIRALRKPYSHWLPGIQEDYHGPRSHKSRHH

KAE8126159.1 hypothetical protein FH972_020903 [Carpinus fangiana]2.1e-0645.65Show/hide
Query:  SMAVLLLFLIMS-QAQGIRL----LEKGINKEYKKNG-AVLGG----KNGGDLLMTMKKRAPIRALRKPYSHWLPGIQEDYHGPRSHKSRHH
        ++++LLL L++S +AQGIRL    +  G  K+++ +G A++ G    K+G     TMKKR   R L K   HWLP I EDY+GPRSH+ RHH
Subjt:  SMAVLLLFLIMS-QAQGIRL----LEKGINKEYKKNG-AVLGG----KNGGDLLMTMKKRAPIRALRKPYSHWLPGIQEDYHGPRSHKSRHH

KAG6586348.1 Ubiquitin-like domain-containing protein CIP73, partial [Cucurbita argyrosperma subsp. sororia]7.5e-1769.74Show/hide
Query:  MKLSSMAVLLLFLIMSQAQGIRLLEKGINKEYKKNGAVLGGKNGGDLLMTMKKRAPIRALRKPYSHWLPGIQEDYH
        MK SSMAVLLLFLI+S+A+GIRLL+K ++KE K        +NGGDLL TMK RAP +A RKPYSHWLPGIQEDYH
Subjt:  MKLSSMAVLLLFLIMSQAQGIRLLEKGINKEYKKNGAVLGGKNGGDLLMTMKKRAPIRALRKPYSHWLPGIQEDYH

KAG6769267.1 hypothetical protein POTOM_024887 [Populus tomentosa]1.7e-0540.82Show/hide
Query:  MAVLLLFLIMSQAQGIRL-------------LEKGINKEYKKNGAVLGG----KNGGDLLMTMKKRAPIRALRKPYSHWLPGIQEDYHGPRSHKSRHH
        +++LLL  ++ QAQGIRL              EK  +KE   +G VLG     K G     TM+KR      +K   HWLP I EDY+GPR+HK +HH
Subjt:  MAVLLLFLIMSQAQGIRL-------------LEKGINKEYKKNGAVLGG----KNGGDLLMTMKKRAPIRALRKPYSHWLPGIQEDYHGPRSHKSRHH

XP_024445403.1 uncharacterized protein LOC112324937 [Populus trichocarpa]5.6e-0436.63Show/hide
Query:  MAVLLLFLIMSQAQGIRLLEKGIN--------------KEYKKNGAVLG------GKNGGDLLMTMKKRAPIRALRKPYSHWLPGIQEDYHGPRSHKSRH
        +++LLL  ++ +AQGIR LEKG                KE   NG VLG       ++    + + +KR    A +    HWLP I EDY+GPR+HK +H
Subjt:  MAVLLLFLIMSQAQGIRLLEKGIN--------------KEYKKNGAVLG------GKNGGDLLMTMKKRAPIRALRKPYSHWLPGIQEDYHGPRSHKSRH

Query:  H
        H
Subjt:  H

TrEMBL top hitse value%identityAlignment
A0A0A0LJ48 Uncharacterized protein2.9e-3087.8Show/hide
Query:  MAVLLLFL-IMSQAQGIRLLEKGINKEYKKNGAVLGGKNGGDLLMTMKKRAPIRALRKPYSHWLPGIQEDYHGPRSHKSRHH
        MAVLLLFL IM QAQGIRLLEKG++KEYKK+G  L  KNGGD LMTMKKRAPIRALRKPYSHWLPGIQEDYHGPRSHKSRHH
Subjt:  MAVLLLFL-IMSQAQGIRLLEKGINKEYKKNGAVLGGKNGGDLLMTMKKRAPIRALRKPYSHWLPGIQEDYHGPRSHKSRHH

A0A0D2U6Z9 Uncharacterized protein9.3e-0540.23Show/hide
Query:  SMAVLLLFLI-MSQAQGIRLLE--KGINKEYKKNGAVLGGKNG--GDLLMTMKKRAPIRALRKPYSHWLPGIQEDYHGPRSHKSRHH
        ++++L+LF+I +S  QGIRL +  K    +  + GA++   NG  GD+L+  +        RK + HWLP I EDY+GPR H+ RHH
Subjt:  SMAVLLLFLI-MSQAQGIRLLE--KGINKEYKKNGAVLGGKNG--GDLLMTMKKRAPIRALRKPYSHWLPGIQEDYHGPRSHKSRHH

A0A5J5R1K5 Uncharacterized protein9.3e-0540.23Show/hide
Query:  SMAVLLLFLI-MSQAQGIRLLE--KGINKEYKKNGAVLGGKNG--GDLLMTMKKRAPIRALRKPYSHWLPGIQEDYHGPRSHKSRHH
        ++++L+LF+I +S  QGIRL +  K    +  + GA++   NG  GD+L+  +        RK + HWLP I EDY+GPR H+ RHH
Subjt:  SMAVLLLFLI-MSQAQGIRLLE--KGINKEYKKNGAVLGGKNG--GDLLMTMKKRAPIRALRKPYSHWLPGIQEDYHGPRSHKSRHH

A0A5N6RX03 Uncharacterized protein9.9e-0745.65Show/hide
Query:  SMAVLLLFLIMS-QAQGIRL----LEKGINKEYKKNG-AVLGG----KNGGDLLMTMKKRAPIRALRKPYSHWLPGIQEDYHGPRSHKSRHH
        ++++LLL L++S +AQGIRL    +  G  K+++ +G A++ G    K+G     TMKKR   R L K   HWLP I EDY+GPRSH+ RHH
Subjt:  SMAVLLLFLIMS-QAQGIRL----LEKGINKEYKKNG-AVLGG----KNGGDLLMTMKKRAPIRALRKPYSHWLPGIQEDYHGPRSHKSRHH

A0A6M2ES64 Uncharacterized protein8.4e-0641.67Show/hide
Query:  AVLLLFLIMSQAQGIRL-------------LEKGINKEYKKNGAVLGGK---NGGDLLMTMKKRAPIRALRKPYSHWLPGIQEDYHGPRSHKSRHH
        ++LLL  ++ QAQGIRL              EK  +KE K +G VLG       G    TM+KR      +K   HWLP I EDY+GPR+HK  HH
Subjt:  AVLLLFLIMSQAQGIRL-------------LEKGINKEYKKNGAVLGGK---NGGDLLMTMKKRAPIRALRKPYSHWLPGIQEDYHGPRSHKSRHH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGCCATTATTGTTGCTCTAAAAGCACAAGCTTTTCTTCATACATTCCAAATGAAGCTCTCTTCAATGGCGGTTCTTCTGCTTTTCCTTATCATGTCTCAAGCTCA
AGGGATTAGGTTGTTGGAGAAAGGAATCAACAAAGAGTATAAGAAAAATGGAGCTGTCTTGGGTGGTAAAAATGGTGGAGATTTATTGATGACAATGAAGAAGAGAGCCC
CAATCAGGGCTTTAAGAAAACCATATTCTCATTGGCTGCCAGGCATTCAAGAAGATTATCATGGACCAAGAAGCCATAAATCTAGGCACCATTAG
mRNA sequenceShow/hide mRNA sequence
ATGATTGCCATTATTGTTGCTCTAAAAGCACAAGCTTTTCTTCATACATTCCAAATGAAGCTCTCTTCAATGGCGGTTCTTCTGCTTTTCCTTATCATGTCTCAAGCTCA
AGGGATTAGGTTGTTGGAGAAAGGAATCAACAAAGAGTATAAGAAAAATGGAGCTGTCTTGGGTGGTAAAAATGGTGGAGATTTATTGATGACAATGAAGAAGAGAGCCC
CAATCAGGGCTTTAAGAAAACCATATTCTCATTGGCTGCCAGGCATTCAAGAAGATTATCATGGACCAAGAAGCCATAAATCTAGGCACCATTAGATTTTTTATCATTAT
TATTTATATGGATTATTTGAGACGTACATAGAAACCGA
Protein sequenceShow/hide protein sequence
MIAIIVALKAQAFLHTFQMKLSSMAVLLLFLIMSQAQGIRLLEKGINKEYKKNGAVLGGKNGGDLLMTMKKRAPIRALRKPYSHWLPGIQEDYHGPRSHKSRHH