; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc02G18730 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G18730
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionRNA polymerase II subunit 5-mediating protein-like protein isoform X1
Genome locationClcChr02:31267100..31274330
RNA-Seq ExpressionClc02G18730
SyntenyClc02G18730
Gene Ontology termsNA
InterPro domainsIPR004127 - Prefoldin alpha-like
IPR009053 - Prefoldin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062034.1 RNA polymerase II subunit 5-mediating protein-like protein isoform X1 [Cucumis melo var. makuwa]3.0e-16686.67Show/hide
Query:  MEAGRAKGTVTPLSSLFPAQDAHKAATRVQDAISEKQRELEHLLGFISDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAER
        MEAGR KGTVTPLSSLFPAQDA KAA+RVQ AISE QR+LE L GFI+DN N+I LVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAER
Subjt:  MEAGRAKGTVTPLSSLFPAQDAHKAATRVQDAISEKQRELEHLLGFISDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAER

Query:  TSKQTVEILKRRGKSLDSQVDSLKAMMDNLKAEASFFDATASEAEEGLVEIREEYVEGNFSEQESGSGVNKQDVPSVSGVDGAKIVEEDAEYARIMSRLD
        TSKQTVEILKRRGK+LDSQVDSLKA MDNLKAEASFFDATASEAEEGLVEI+EEYVE NF EQE  S VNKQDV  VSGVD AKI E DAEYAR+M+R D
Subjt:  TSKQTVEILKRRGKSLDSQVDSLKAMMDNLKAEASFFDATASEAEEGLVEIREEYVEGNFSEQESGSGVNKQDVPSVSGVDGAKIVEEDAEYARIMSRLD

Query:  ELEKEEELAAANGDQSDEEDEEEKETADQSLEKFYDDKQSYSKGSTSTWLRDENVGSKELLDKYQQQEEASTNPSNCSGLSVQSSSKEDVSSGKNSLGQT
        ELEKEEELAAANG++SD+EDEEEKET +QSLEKFYDDKQSYS+GSTS WLRDENV SKELLDKYQ+Q+EASTNPSNCSGLSVQSS KEDV+SG +SL Q+
Subjt:  ELEKEEELAAANGDQSDEEDEEEKETADQSLEKFYDDKQSYSKGSTSTWLRDENVGSKELLDKYQQQEEASTNPSNCSGLSVQSSSKEDVSSGKNSLGQT

Query:  QRVRNPNPAAKSVTFAEVKEKNQRLPPSTSEAFTGSIIERPPAIPKNSKQETETPLQPSGSQPSKPVSRFKMQRR
        QRVRNPNPAAKSV FAEVKEK Q LPPSTS+AFTGSIIERPP IPK SKQETETPLQPSGSQPSKPVSRFKMQRR
Subjt:  QRVRNPNPAAKSVTFAEVKEKNQRLPPSTSEAFTGSIIERPPAIPKNSKQETETPLQPSGSQPSKPVSRFKMQRR

TYK04987.1 RNA polymerase II subunit 5-mediating protein-like protein isoform X1 [Cucumis melo var. makuwa]1.0e-16974.89Show/hide
Query:  KQEENGKPSVQRMLTAWAESYVRGMQLVSSSYDVLALKFLGIE---DVLRCYGVQVFADVMVVRLKPYPIREVEVEGSQNGVIMEAGRAKGTVTPLSSLF
        ++E    P+ ++ +      ++     +S+S   L + +L +E   + +R YG+ + A   ++RL+           SQ+GVIMEAGR KGTVTPLSSLF
Subjt:  KQEENGKPSVQRMLTAWAESYVRGMQLVSSSYDVLALKFLGIE---DVLRCYGVQVFADVMVVRLKPYPIREVEVEGSQNGVIMEAGRAKGTVTPLSSLF

Query:  PAQDAHKAATRVQDAISEKQRELEHLLGFISDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKSLD
        PAQDA KAA+RVQ AISE Q++LE L GFI+DN N+I LVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGK+LD
Subjt:  PAQDAHKAATRVQDAISEKQRELEHLLGFISDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKSLD

Query:  SQVDSLKAMMDNLKAEASFFDATASEAEEGLVEIREEYVEGNFSEQESGSGVNKQDVPSVSGVDGAKIVEEDAEYARIMSRLDELEKEEELAAANGDQSD
        SQVDSLKA MDNLKAEASFFDATASEAEEGLVEI+EEYVE NF EQE  SGVNKQDV  VSGVD AKI E DAEYAR+M+R DELEKEEELAAANG++SD
Subjt:  SQVDSLKAMMDNLKAEASFFDATASEAEEGLVEIREEYVEGNFSEQESGSGVNKQDVPSVSGVDGAKIVEEDAEYARIMSRLDELEKEEELAAANGDQSD

Query:  EEDEEEKETADQSLEKFYDDKQSYSKGSTSTWLRDENVGSKELLDKYQQQEEASTNPSNCSGLSVQSSSKEDVSSGKNSLGQTQRVRNPNPAAKSVTFAE
        +EDEEEKET +QSLEKFYDDKQSYS+GSTS WLRDENV SKELLDKYQ+Q+EASTNPSNCSGLSVQSS KEDV+SG +SL Q+QRVRNPNPAAKSV FAE
Subjt:  EEDEEEKETADQSLEKFYDDKQSYSKGSTSTWLRDENVGSKELLDKYQQQEEASTNPSNCSGLSVQSSSKEDVSSGKNSLGQTQRVRNPNPAAKSVTFAE

Query:  VKEKNQRLPPSTSEAFTGSIIERPPAIPKNSKQETETPLQPSGSQPSKPVSRFKMQRR
        VKEK Q LPPSTS+AFTGSIIERPP IPK SKQETETPLQPSGSQPSKPVSRFKMQRR
Subjt:  VKEKNQRLPPSTSEAFTGSIIERPPAIPKNSKQETETPLQPSGSQPSKPVSRFKMQRR

XP_004139947.1 RNA polymerase II subunit 5-mediating protein homolog isoform X2 [Cucumis sativus]1.1e-16586.13Show/hide
Query:  MEAGRAKGTVTPLSSLFPAQDAHKAATRVQDAISEKQRELEHLLGFISDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAER
        ME+GR KGTVT L+SLFPAQDA KAA+RVQDAISEKQRELE L GFI+DN NLI LVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAER
Subjt:  MEAGRAKGTVTPLSSLFPAQDAHKAATRVQDAISEKQRELEHLLGFISDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAER

Query:  TSKQTVEILKRRGKSLDSQVDSLKAMMDNLKAEASFFDATASEAEEGLVEIREEYVEGNFSEQESGSGVNKQDVPSVSGVDGAKIVEEDAEYARIMSRLD
        TSKQT EILKRRGK+LDSQVDSLKAMMDNLKAEASFFDATASEAE+GLVEI+EEYVE NF EQES SGVNKQDVPSVSGVD AKI E DAEYAR+M+R D
Subjt:  TSKQTVEILKRRGKSLDSQVDSLKAMMDNLKAEASFFDATASEAEEGLVEIREEYVEGNFSEQESGSGVNKQDVPSVSGVDGAKIVEEDAEYARIMSRLD

Query:  ELEKEEELAAANGDQSDEEDEEEKETADQSLEKFYDDKQSYSKGSTSTWLRDENVGSKELLDKYQQQEEASTNPSNCSGLSVQSSSKEDVSSGKNSLGQT
        ELEKEEELAAANG++SD+EDEEEK T +QSLE+FY DKQS SKGSTSTW RDENV SKELL+KYQ+Q+EASTNPSNCSGLSVQ+S KEDV+SG NSL ++
Subjt:  ELEKEEELAAANGDQSDEEDEEEKETADQSLEKFYDDKQSYSKGSTSTWLRDENVGSKELLDKYQQQEEASTNPSNCSGLSVQSSSKEDVSSGKNSLGQT

Query:  QRVRNPNPAAKSVTFAEVKEKNQRLPPSTSEAFTGSIIERPPAIPKNSKQETETPLQPSGSQPSKPVSRFKMQRR
        QRV NPNPAAKSVTFAEVKEKNQ LPPST++AFTGSIIERPP IPK SKQETET LQPSGSQPSKPVSRFKMQRR
Subjt:  QRVRNPNPAAKSVTFAEVKEKNQRLPPSTSEAFTGSIIERPPAIPKNSKQETETPLQPSGSQPSKPVSRFKMQRR

XP_016900539.1 PREDICTED: RNA polymerase II subunit 5-mediating protein homolog isoform X1 [Cucumis melo]6.1e-16786.67Show/hide
Query:  MEAGRAKGTVTPLSSLFPAQDAHKAATRVQDAISEKQRELEHLLGFISDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAER
        MEAGR KGTVTPLSSLFPAQDA KAA+RVQ AISE Q++LE L GFI+DN N+I LVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAER
Subjt:  MEAGRAKGTVTPLSSLFPAQDAHKAATRVQDAISEKQRELEHLLGFISDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAER

Query:  TSKQTVEILKRRGKSLDSQVDSLKAMMDNLKAEASFFDATASEAEEGLVEIREEYVEGNFSEQESGSGVNKQDVPSVSGVDGAKIVEEDAEYARIMSRLD
        TSKQTVEILKRRGK+LDSQVDSLKA MDNLKAEASFFDATASEAEEGLVEI+EEYVE NF EQE  SGVNKQDV  VSGVD AKI E DAEYAR+M+R D
Subjt:  TSKQTVEILKRRGKSLDSQVDSLKAMMDNLKAEASFFDATASEAEEGLVEIREEYVEGNFSEQESGSGVNKQDVPSVSGVDGAKIVEEDAEYARIMSRLD

Query:  ELEKEEELAAANGDQSDEEDEEEKETADQSLEKFYDDKQSYSKGSTSTWLRDENVGSKELLDKYQQQEEASTNPSNCSGLSVQSSSKEDVSSGKNSLGQT
        ELEKEEELAAANG++SD+EDEEEKET +QSLEKFYDDKQSYS+GSTS WLRDENV SKELLDKYQ+Q+EASTNPSNCSGLSVQSS KEDV+SG +SL Q+
Subjt:  ELEKEEELAAANGDQSDEEDEEEKETADQSLEKFYDDKQSYSKGSTSTWLRDENVGSKELLDKYQQQEEASTNPSNCSGLSVQSSSKEDVSSGKNSLGQT

Query:  QRVRNPNPAAKSVTFAEVKEKNQRLPPSTSEAFTGSIIERPPAIPKNSKQETETPLQPSGSQPSKPVSRFKMQRR
        QRVRNPNPAAKSV FAEVKEK Q LPPSTS+AFTGSIIERPP IPK SKQETETPLQPSGSQPSKPVSRFKMQRR
Subjt:  QRVRNPNPAAKSVTFAEVKEKNQRLPPSTSEAFTGSIIERPPAIPKNSKQETETPLQPSGSQPSKPVSRFKMQRR

XP_038901192.1 RNA polymerase II subunit 5-mediating protein homolog [Benincasa hispida]2.6e-17892Show/hide
Query:  MEAGRAKGTVTPLSSLFPAQDAHKAATRVQDAISEKQRELEHLLGFISDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAER
        ME G AKGTVTPL+SLFPAQ+AHKAA RVQDAISEKQRELE L GFI+DNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAER
Subjt:  MEAGRAKGTVTPLSSLFPAQDAHKAATRVQDAISEKQRELEHLLGFISDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAER

Query:  TSKQTVEILKRRGKSLDSQVDSLKAMMDNLKAEASFFDATASEAEEGLVEIREEYVEGNFSEQESGSGVNKQDVPSVSGVDGAKIVEEDAEYARIMSRLD
        TSKQTVEILKRRGK+LDSQVDSLKAMMDNLKAEASFF ATA+E+EEGLVEI+EEYVE NFSEQ+SGSGVNKQDVPSVSGVD AKI EEDAEYARIM+RLD
Subjt:  TSKQTVEILKRRGKSLDSQVDSLKAMMDNLKAEASFFDATASEAEEGLVEIREEYVEGNFSEQESGSGVNKQDVPSVSGVDGAKIVEEDAEYARIMSRLD

Query:  ELEKEEELAAANGDQSDEEDEEEKETADQSLEKFYDDKQSYSKGSTSTWLRDENVGSKELLDKYQQQEEASTNPSNCSGLSVQSSSKEDVSSGKNSLGQT
        ELEKEEELAAANGDQSDEEDEEEKET+DQSLEKFYDDKQSYSKGSTS WL DENVGSKELLDKYQQQ EASTN SN SGLS QSSSKEDVSSGKNSL QT
Subjt:  ELEKEEELAAANGDQSDEEDEEEKETADQSLEKFYDDKQSYSKGSTSTWLRDENVGSKELLDKYQQQEEASTNPSNCSGLSVQSSSKEDVSSGKNSLGQT

Query:  QRVRNPNPAAKSVTFAEVKEKNQRLPPSTSEAFTGSIIERPPAIPKNSKQETETPLQPSGSQPSKPVSRFKMQRR
        QRVRNPNPAAKSVTFAEVKEKNQ LPPST+EAFTGSIIERPP IPK SKQETETPLQPSGSQPSKPVSRFKMQRR
Subjt:  QRVRNPNPAAKSVTFAEVKEKNQRLPPSTSEAFTGSIIERPPAIPKNSKQETETPLQPSGSQPSKPVSRFKMQRR

TrEMBL top hitse value%identityAlignment
A0A0A0KB27 Uncharacterized protein7.2e-17485.64Show/hide
Query:  VVRLKPYPIREVEVEGSQNGVIMEAGRAKGTVTPLSSLFPAQDAHKAATRVQDAISEKQRELEHLLGFISDNANLINLVQKLPEELHHEVMVPFGKAAFF
        VVR KP PI E EVEGSQ+GVIME+GR KGTVT L+SLFPAQDA KAA+RVQDAISEKQRELE L GFI+DN NLI LVQKLPEELHHEVMVPFGKAAFF
Subjt:  VVRLKPYPIREVEVEGSQNGVIMEAGRAKGTVTPLSSLFPAQDAHKAATRVQDAISEKQRELEHLLGFISDNANLINLVQKLPEELHHEVMVPFGKAAFF

Query:  PGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKSLDSQVDSLKAMMDNLKAEASFFDATASEAEEGLVEIREEYVEGNFSEQESGSGVNKQDVPSVS
        PGRLIHTNEFLVLLGEGYYAERTSKQT EILKRRGK+LDSQVDSLKAMMDNLKAEASFFDATASEAE+GLVEI+EEYVE NF EQES SGVNKQDVPSVS
Subjt:  PGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKSLDSQVDSLKAMMDNLKAEASFFDATASEAEEGLVEIREEYVEGNFSEQESGSGVNKQDVPSVS

Query:  GVDGAKIVEEDAEYARIMSRLDELEKEEELAAANGDQSDEEDEEEKETADQSLEKFYDDKQSYSKGSTSTWLRDENVGSKELLDKYQQQEEASTNPSNCS
        GVD AKI E DAEYAR+M+R DELEKEEELAAANG++SD+EDEEEK T +QSLE+FY DKQS SKGSTSTW RDENV SKELL+KYQ+Q+EASTNPSNCS
Subjt:  GVDGAKIVEEDAEYARIMSRLDELEKEEELAAANGDQSDEEDEEEKETADQSLEKFYDDKQSYSKGSTSTWLRDENVGSKELLDKYQQQEEASTNPSNCS

Query:  GLSVQSSSKEDVSSGKNSLGQTQRVRNPNPAAKSVTFAEVKEKNQRLPPSTSEAFTGSIIERPPAIPKNSKQETETPLQPSGSQPSKPVSRFKMQRR
        GLSVQ+S KEDV+SG NSL ++QRV NPNPAAKSVTFAEVKEKNQ LPPST++AFTGSIIERPP IPK SKQETET LQPSGSQPSKPVSRFKMQRR
Subjt:  GLSVQSSSKEDVSSGKNSLGQTQRVRNPNPAAKSVTFAEVKEKNQRLPPSTSEAFTGSIIERPPAIPKNSKQETETPLQPSGSQPSKPVSRFKMQRR

A0A1S3BK98 RNA polymerase II subunit 5-mediating protein homolog isoform X22.8e-16586.4Show/hide
Query:  MEAGRAKGTVTPLSSLFPAQDAHKAATRVQDAISEKQRELEHLLGFISDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAER
        MEAGR KGTVTPLSSLFPAQDA KAA+RVQ AISE Q++LE L GFI+DN N+I LVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAER
Subjt:  MEAGRAKGTVTPLSSLFPAQDAHKAATRVQDAISEKQRELEHLLGFISDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAER

Query:  TSKQTVEILKRRGKSLDSQVDSLKAMMDNLKAEASFFDATASEAEEGLVEIREEYVEGNFSEQESGSGVNKQDVPSVSGVDGAKIVEEDAEYARIMSRLD
        TSKQTVEILKRRGK+LDSQVDSLKA MDNLKAEASFFDATASEAEEGLVEI+EEYVE NF EQE  S VNKQDV  VSGVD AKI E DAEYAR+M+R D
Subjt:  TSKQTVEILKRRGKSLDSQVDSLKAMMDNLKAEASFFDATASEAEEGLVEIREEYVEGNFSEQESGSGVNKQDVPSVSGVDGAKIVEEDAEYARIMSRLD

Query:  ELEKEEELAAANGDQSDEEDEEEKETADQSLEKFYDDKQSYSKGSTSTWLRDENVGSKELLDKYQQQEEASTNPSNCSGLSVQSSSKEDVSSGKNSLGQT
        ELEKEEELAAANG++SD+EDEEEKET +QSLEKFYDDKQSYS+GSTS WLRDENV SKELLDKYQ+Q+EASTNPSNCSGLSVQSS KEDV+SG +SL Q+
Subjt:  ELEKEEELAAANGDQSDEEDEEEKETADQSLEKFYDDKQSYSKGSTSTWLRDENVGSKELLDKYQQQEEASTNPSNCSGLSVQSSSKEDVSSGKNSLGQT

Query:  QRVRNPNPAAKSVTFAEVKEKNQRLPPSTSEAFTGSIIERPPAIPKNSKQETETPLQPSGSQPSKPVSRFKMQRR
        QRVRNPNPAAKSV FAEVKEK Q LPPSTS+AFTGSIIERPP IPK SKQETETPLQPSGSQPSKPVSRFKMQRR
Subjt:  QRVRNPNPAAKSVTFAEVKEKNQRLPPSTSEAFTGSIIERPPAIPKNSKQETETPLQPSGSQPSKPVSRFKMQRR

A0A1S4DX32 RNA polymerase II subunit 5-mediating protein homolog isoform X12.9e-16786.67Show/hide
Query:  MEAGRAKGTVTPLSSLFPAQDAHKAATRVQDAISEKQRELEHLLGFISDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAER
        MEAGR KGTVTPLSSLFPAQDA KAA+RVQ AISE Q++LE L GFI+DN N+I LVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAER
Subjt:  MEAGRAKGTVTPLSSLFPAQDAHKAATRVQDAISEKQRELEHLLGFISDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAER

Query:  TSKQTVEILKRRGKSLDSQVDSLKAMMDNLKAEASFFDATASEAEEGLVEIREEYVEGNFSEQESGSGVNKQDVPSVSGVDGAKIVEEDAEYARIMSRLD
        TSKQTVEILKRRGK+LDSQVDSLKA MDNLKAEASFFDATASEAEEGLVEI+EEYVE NF EQE  SGVNKQDV  VSGVD AKI E DAEYAR+M+R D
Subjt:  TSKQTVEILKRRGKSLDSQVDSLKAMMDNLKAEASFFDATASEAEEGLVEIREEYVEGNFSEQESGSGVNKQDVPSVSGVDGAKIVEEDAEYARIMSRLD

Query:  ELEKEEELAAANGDQSDEEDEEEKETADQSLEKFYDDKQSYSKGSTSTWLRDENVGSKELLDKYQQQEEASTNPSNCSGLSVQSSSKEDVSSGKNSLGQT
        ELEKEEELAAANG++SD+EDEEEKET +QSLEKFYDDKQSYS+GSTS WLRDENV SKELLDKYQ+Q+EASTNPSNCSGLSVQSS KEDV+SG +SL Q+
Subjt:  ELEKEEELAAANGDQSDEEDEEEKETADQSLEKFYDDKQSYSKGSTSTWLRDENVGSKELLDKYQQQEEASTNPSNCSGLSVQSSSKEDVSSGKNSLGQT

Query:  QRVRNPNPAAKSVTFAEVKEKNQRLPPSTSEAFTGSIIERPPAIPKNSKQETETPLQPSGSQPSKPVSRFKMQRR
        QRVRNPNPAAKSV FAEVKEK Q LPPSTS+AFTGSIIERPP IPK SKQETETPLQPSGSQPSKPVSRFKMQRR
Subjt:  QRVRNPNPAAKSVTFAEVKEKNQRLPPSTSEAFTGSIIERPPAIPKNSKQETETPLQPSGSQPSKPVSRFKMQRR

A0A5A7V404 RNA polymerase II subunit 5-mediating protein-like protein isoform X11.5e-16686.67Show/hide
Query:  MEAGRAKGTVTPLSSLFPAQDAHKAATRVQDAISEKQRELEHLLGFISDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAER
        MEAGR KGTVTPLSSLFPAQDA KAA+RVQ AISE QR+LE L GFI+DN N+I LVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAER
Subjt:  MEAGRAKGTVTPLSSLFPAQDAHKAATRVQDAISEKQRELEHLLGFISDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAER

Query:  TSKQTVEILKRRGKSLDSQVDSLKAMMDNLKAEASFFDATASEAEEGLVEIREEYVEGNFSEQESGSGVNKQDVPSVSGVDGAKIVEEDAEYARIMSRLD
        TSKQTVEILKRRGK+LDSQVDSLKA MDNLKAEASFFDATASEAEEGLVEI+EEYVE NF EQE  S VNKQDV  VSGVD AKI E DAEYAR+M+R D
Subjt:  TSKQTVEILKRRGKSLDSQVDSLKAMMDNLKAEASFFDATASEAEEGLVEIREEYVEGNFSEQESGSGVNKQDVPSVSGVDGAKIVEEDAEYARIMSRLD

Query:  ELEKEEELAAANGDQSDEEDEEEKETADQSLEKFYDDKQSYSKGSTSTWLRDENVGSKELLDKYQQQEEASTNPSNCSGLSVQSSSKEDVSSGKNSLGQT
        ELEKEEELAAANG++SD+EDEEEKET +QSLEKFYDDKQSYS+GSTS WLRDENV SKELLDKYQ+Q+EASTNPSNCSGLSVQSS KEDV+SG +SL Q+
Subjt:  ELEKEEELAAANGDQSDEEDEEEKETADQSLEKFYDDKQSYSKGSTSTWLRDENVGSKELLDKYQQQEEASTNPSNCSGLSVQSSSKEDVSSGKNSLGQT

Query:  QRVRNPNPAAKSVTFAEVKEKNQRLPPSTSEAFTGSIIERPPAIPKNSKQETETPLQPSGSQPSKPVSRFKMQRR
        QRVRNPNPAAKSV FAEVKEK Q LPPSTS+AFTGSIIERPP IPK SKQETETPLQPSGSQPSKPVSRFKMQRR
Subjt:  QRVRNPNPAAKSVTFAEVKEKNQRLPPSTSEAFTGSIIERPPAIPKNSKQETETPLQPSGSQPSKPVSRFKMQRR

A0A5D3BZL3 RNA polymerase II subunit 5-mediating protein-like protein isoform X14.8e-17074.89Show/hide
Query:  KQEENGKPSVQRMLTAWAESYVRGMQLVSSSYDVLALKFLGIE---DVLRCYGVQVFADVMVVRLKPYPIREVEVEGSQNGVIMEAGRAKGTVTPLSSLF
        ++E    P+ ++ +      ++     +S+S   L + +L +E   + +R YG+ + A   ++RL+           SQ+GVIMEAGR KGTVTPLSSLF
Subjt:  KQEENGKPSVQRMLTAWAESYVRGMQLVSSSYDVLALKFLGIE---DVLRCYGVQVFADVMVVRLKPYPIREVEVEGSQNGVIMEAGRAKGTVTPLSSLF

Query:  PAQDAHKAATRVQDAISEKQRELEHLLGFISDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKSLD
        PAQDA KAA+RVQ AISE Q++LE L GFI+DN N+I LVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGK+LD
Subjt:  PAQDAHKAATRVQDAISEKQRELEHLLGFISDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKSLD

Query:  SQVDSLKAMMDNLKAEASFFDATASEAEEGLVEIREEYVEGNFSEQESGSGVNKQDVPSVSGVDGAKIVEEDAEYARIMSRLDELEKEEELAAANGDQSD
        SQVDSLKA MDNLKAEASFFDATASEAEEGLVEI+EEYVE NF EQE  SGVNKQDV  VSGVD AKI E DAEYAR+M+R DELEKEEELAAANG++SD
Subjt:  SQVDSLKAMMDNLKAEASFFDATASEAEEGLVEIREEYVEGNFSEQESGSGVNKQDVPSVSGVDGAKIVEEDAEYARIMSRLDELEKEEELAAANGDQSD

Query:  EEDEEEKETADQSLEKFYDDKQSYSKGSTSTWLRDENVGSKELLDKYQQQEEASTNPSNCSGLSVQSSSKEDVSSGKNSLGQTQRVRNPNPAAKSVTFAE
        +EDEEEKET +QSLEKFYDDKQSYS+GSTS WLRDENV SKELLDKYQ+Q+EASTNPSNCSGLSVQSS KEDV+SG +SL Q+QRVRNPNPAAKSV FAE
Subjt:  EEDEEEKETADQSLEKFYDDKQSYSKGSTSTWLRDENVGSKELLDKYQQQEEASTNPSNCSGLSVQSSSKEDVSSGKNSLGQTQRVRNPNPAAKSVTFAE

Query:  VKEKNQRLPPSTSEAFTGSIIERPPAIPKNSKQETETPLQPSGSQPSKPVSRFKMQRR
        VKEK Q LPPSTS+AFTGSIIERPP IPK SKQETETPLQPSGSQPSKPVSRFKMQRR
Subjt:  VKEKNQRLPPSTSEAFTGSIIERPPAIPKNSKQETETPLQPSGSQPSKPVSRFKMQRR

SwissProt top hitse value%identityAlignment
O94763 Unconventional prefoldin RPB5 interactor 15.6e-1428.19Show/hide
Query:  PLSSLFP--AQDAHKAATRVQDAISEKQRELEHLLGFISDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEIL
        P  +L P  A D  +     +  ++  Q  ++H     +D   L   +  LP++L + +MVPFG  AF PG+L+HTNE  VLLG+ ++A+ ++KQ V ++
Subjt:  PLSSLFP--AQDAHKAATRVQDAISEKQRELEHLLGFISDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEIL

Query:  KRRGKSLDSQVDSLKAMMDNLKAEASFFD--ATASEAEEGLVEIREEYVEGNFSEQESGSGVNK-QDVPSVSGVDGAKIVEEDAEY-----ARIMSRLDE
        + R + +   +D LK +M N ++   F +     S+A   +V+IREE ++ +F  +      +K    P  S +  A I  +           + +RL+E
Subjt:  KRRGKSLDSQVDSLKAMMDNLKAEASFFD--ATASEAEEGLVEIREEYVEGNFSEQESGSGVNK-QDVPSVSGVDGAKIVEEDAEY-----ARIMSRLDE

Query:  LEKEEEL----------AAANGDQ--SDEEDEEEKETADQSLEKFYDDKQSYSKGSTST
        LE++EEL            ANG+   S EE++E++ T   ++ +  D      K   S+
Subjt:  LEKEEEL----------AAANGDQ--SDEEDEEEKETADQSLEKFYDDKQSYSKGSTST

Q3B7M7 Unconventional prefoldin RPB5 interactor2.1e-1328.44Show/hide
Query:  QDAISEKQRELEHLLGFISDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKSLDSQVDSLKAMMDN
        +  ++  Q +++H     +D   L   +  LP++L + +MVPFG  AF PG+L+HTNE  VLLG+ ++A+ ++KQ V +++ R + +   +D LK +M N
Subjt:  QDAISEKQRELEHLLGFISDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKSLDSQVDSLKAMMDN

Query:  LKAEASFFD--ATASEAEEGLVEIREEYVEGNFSEQESGSGVNK-QDVPSVSGVDGAKIVEE--------DAEYARIMSRLDELEKEEEL----------
         ++   F +     S+A   +V+IREE ++ +F  +      +K    P  S +  A+   +        D E   +  RL+ELE++EEL          
Subjt:  LKAEASFFD--ATASEAEEGLVEIREEYVEGNFSEQESGSGVNK-QDVPSVSGVDGAKIVEE--------DAEYARIMSRLDELEKEEEL----------

Query:  --AAANGDQSDEEDEEEKETADQSL
            ANG+    E+E+E +  + ++
Subjt:  --AAANGDQSDEEDEEEKETADQSL

Q3TLD5 Unconventional prefoldin RPB5 interactor9.5e-1429.82Show/hide
Query:  QDAISEKQRELEHLLGFISDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKSLDSQVDSLKAMMDN
        +  ++  Q +++H     +D + L   ++ LP++L ++VMVPFG  AF PG+L+HTNE  VLLG+ ++A+ ++KQ V +++ R + +   +D  K ++ N
Subjt:  QDAISEKQRELEHLLGFISDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKSLDSQVDSLKAMMDN

Query:  LKAEASFFD--ATASEAEEGLVEIREEYVEGNFS-------EQESGSGVNKQDVPSVSGVDGAKIVEEDAEYARIMSRLDELEKEEEL----------AA
         ++   F +     S+A    V+IREE ++ +F          +  S     D+      +G K  +   +   + +RL+ELE++EEL            
Subjt:  LKAEASFFD--ATASEAEEGLVEIREEYVEGNFS-------EQESGSGVNKQDVPSVSGVDGAKIVEEDAEYARIMSRLDELEKEEEL----------AA

Query:  ANGDQSDEEDEEEKETAD
        ANG+      EEEKE AD
Subjt:  ANGDQSDEEDEEEKETAD

Q54HG4 RNA polymerase II subunit 5-mediating protein homolog4.1e-1729.85Show/hide
Query:  RVQDAISEKQRELEHLLGFISDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKSLDSQVDSLKAMM
        + +  + E Q  +E L    +D   LI+ +Q LP+ L  ++MVP GK AFF G L +TNE L+LLG+ Y+A+R+SKQT++I++RR K +D+ ++ L+  +
Subjt:  RVQDAISEKQRELEHLLGFISDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKSLDSQVDSLKAMM

Query:  DNLKAEAS----FFDATASEAEEGLVEIREEYVEGNFSEQESGSGVNKQ-----DVPSVSGVDGAKIVEE-------DAEYARIMSRLDELEKEEELAAA
          LK   S       A   +  + +VEI+EEY      E+E       Q        + +  D  K  EE       D E+ +++ RL  LE++E     
Subjt:  DNLKAEAS----FFDATASEAEEGLVEIREEYVEGNFSEQESGSGVNKQ-----DVPSVSGVDGAKIVEE-------DAEYARIMSRLDELEKEEELAAA

Query:  NGDQSDEEDEEEKETADQSL---EKFYDDKQSYSKGSTSTWLRDENVGSKELLDKYQQQEEASTNPSN
         GD  DEE+  +K      +   ++ YDD  +Y+  +      D++    +  + YQ++      P N
Subjt:  NGDQSDEEDEEEKETADQSL---EKFYDDKQSYSKGSTSTWLRDENVGSKELLDKYQQQEEASTNPSN

Arabidopsis top hitse value%identityAlignment
AT1G03760.1 Prefoldin chaperone subunit family protein3.0e-5541.12Show/hide
Query:  AKGTVTPLSSLFPAQDAHKAATRVQDAISEKQRELEHLLGFISDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQT
        AKGTVTPL   F  +D  KAA+ +++ I EK+ E+  L  ++ +N NLINLV+KLP++LHH VMVPFGK AFFPGRLIHTNE LVLLGE YY +R+SKQT
Subjt:  AKGTVTPLSSLFPAQDAHKAATRVQDAISEKQRELEHLLGFISDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQT

Query:  VEILKRRGKSLDSQVDSLKAMMDNLKAEASFFDATASEAEEGLVEIREEYVEGNFSEQESGSGVNKQDVPSVSGVDGAKIVEEDAEYARIMSRLDELEKE
        V+ LKRR K+L SQ+ SLKA +++L+ EASFF  TASE  +GLVEIREEYVE + S         K+      G      +E+D ++ARIM+RL+ELE E
Subjt:  VEILKRRGKSLDSQVDSLKAMMDNLKAEASFFDATASEAEEGLVEIREEYVEGNFSEQESGSGVNKQDVPSVSGVDGAKIVEEDAEYARIMSRLDELEKE

Query:  EELAAANGDQSDEEDEEEKETADQ--------SLEKFYDDKQSYSKGSTSTWLRDENVGSKELLDKYQQQEEAS--------------TNPSNCSGLSVQ
        EEL   +GD   E+ +   E+ +Q        S  +    +  Y K  T+  + ++  G        + + EA                +P N      Q
Subjt:  EELAAANGDQSDEEDEEEKETADQ--------SLEKFYDDKQSYSKGSTSTWLRDENVGSKELLDKYQQQEEAS--------------TNPSNCSGLSVQ

Query:  SSSKEDVSSGKNSLGQTQRVRNPNPAAKSVTFAEVKEKNQRLPP--STSEAFTGSIIERPPAIPKNSKQETETPLQPSGSQPSKPVSRFKMQRR
          SKE  S G       +  ++    AK+      K + Q+  P   +++AFTGSI+E    +  ++  +T    Q S SQPSKPVSRF+ +RR
Subjt:  SSSKEDVSSGKNSLGQTQRVRNPNPAAKSVTFAEVKEKNQRLPP--STSEAFTGSIIERPPAIPKNSKQETETPLQPSGSQPSKPVSRFKMQRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAAAGCTGAACGACTAATTAACCTTGTGAAGCAAGAGGAAAATGGAAAGCCCTCGGTTCAGCGGATGCTGACCGCGTGGGCGGAATCATATGTGCGAGGGATGCA
ACTGGTGTCTAGTTCCTACGATGTTCTTGCTTTGAAATTTTTGGGTATTGAAGATGTACTTAGGTGCTATGGTGTACAGGTCTTTGCAGATGTTATGGTCGTGAGGTTGA
AGCCCTACCCAATTCGCGAGGTTGAAGTTGAAGGCTCACAGAACGGTGTGATCATGGAAGCAGGACGAGCAAAGGGAACGGTGACGCCGTTGTCCTCTTTATTTCCGGCT
CAGGATGCCCACAAGGCAGCGACGCGTGTCCAAGATGCGATTTCTGAGAAGCAGAGGGAGCTTGAGCATCTCCTCGGTTTCATCTCTGATAATGCCAACCTCATCAACCT
CGTCCAGAAATTACCTGAAGAGCTTCACCACGAAGTCATGGTACCATTTGGGAAGGCGGCGTTTTTCCCAGGGCGTTTGATTCATACTAACGAGTTTCTGGTTCTTCTCG
GAGAAGGTTATTATGCTGAGAGAACATCCAAACAAACAGTGGAGATCTTGAAAAGGAGAGGCAAATCTTTGGATTCTCAAGTTGATTCTCTGAAGGCCATGATGGACAAT
CTTAAAGCTGAGGCCTCATTTTTTGATGCTACAGCTTCTGAAGCTGAGGAGGGTCTAGTCGAGATAAGGGAGGAATATGTGGAAGGAAACTTTAGTGAGCAGGAATCTGG
ATCAGGAGTAAACAAGCAAGATGTTCCTAGTGTTTCTGGAGTTGACGGGGCAAAGATTGTAGAAGAGGATGCAGAATATGCCCGTATAATGTCCAGATTGGATGAACTTG
AGAAGGAAGAAGAACTTGCTGCCGCAAATGGTGACCAAAGTGATGAAGAAGATGAGGAAGAGAAAGAAACTGCAGATCAATCTTTAGAGAAGTTTTATGATGATAAGCAG
AGCTATTCAAAGGGAAGTACTTCTACGTGGCTGAGGGATGAAAATGTAGGAAGTAAAGAGCTACTGGATAAGTATCAACAACAAGAAGAGGCTTCTACCAATCCATCAAA
TTGTTCAGGGTTGTCGGTACAATCTTCATCCAAAGAAGACGTGTCAAGTGGCAAAAATTCTTTGGGTCAGACTCAGCGAGTGAGAAACCCTAATCCTGCTGCAAAGTCTG
TAACGTTCGCTGAAGTAAAAGAAAAGAATCAAAGATTGCCTCCATCTACCAGTGAGGCTTTCACAGGATCCATAATTGAGCGCCCTCCTGCTATACCAAAAAATTCTAAA
CAAGAAACAGAAACTCCATTGCAGCCTTCTGGTTCTCAACCTTCAAAACCAGTATCCAGATTCAAGATGCAAAGAAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGAAAGCTGAACGACTAATTAACCTTGTGAAGCAAGAGGAAAATGGAAAGCCCTCGGTTCAGCGGATGCTGACCGCGTGGGCGGAATCATATGTGCGAGGGATGCA
ACTGGTGTCTAGTTCCTACGATGTTCTTGCTTTGAAATTTTTGGGTATTGAAGATGTACTTAGGTGCTATGGTGTACAGGTCTTTGCAGATGTTATGGTCGTGAGGTTGA
AGCCCTACCCAATTCGCGAGGTTGAAGTTGAAGGCTCACAGAACGGTGTGATCATGGAAGCAGGACGAGCAAAGGGAACGGTGACGCCGTTGTCCTCTTTATTTCCGGCT
CAGGATGCCCACAAGGCAGCGACGCGTGTCCAAGATGCGATTTCTGAGAAGCAGAGGGAGCTTGAGCATCTCCTCGGTTTCATCTCTGATAATGCCAACCTCATCAACCT
CGTCCAGAAATTACCTGAAGAGCTTCACCACGAAGTCATGGTACCATTTGGGAAGGCGGCGTTTTTCCCAGGGCGTTTGATTCATACTAACGAGTTTCTGGTTCTTCTCG
GAGAAGGTTATTATGCTGAGAGAACATCCAAACAAACAGTGGAGATCTTGAAAAGGAGAGGCAAATCTTTGGATTCTCAAGTTGATTCTCTGAAGGCCATGATGGACAAT
CTTAAAGCTGAGGCCTCATTTTTTGATGCTACAGCTTCTGAAGCTGAGGAGGGTCTAGTCGAGATAAGGGAGGAATATGTGGAAGGAAACTTTAGTGAGCAGGAATCTGG
ATCAGGAGTAAACAAGCAAGATGTTCCTAGTGTTTCTGGAGTTGACGGGGCAAAGATTGTAGAAGAGGATGCAGAATATGCCCGTATAATGTCCAGATTGGATGAACTTG
AGAAGGAAGAAGAACTTGCTGCCGCAAATGGTGACCAAAGTGATGAAGAAGATGAGGAAGAGAAAGAAACTGCAGATCAATCTTTAGAGAAGTTTTATGATGATAAGCAG
AGCTATTCAAAGGGAAGTACTTCTACGTGGCTGAGGGATGAAAATGTAGGAAGTAAAGAGCTACTGGATAAGTATCAACAACAAGAAGAGGCTTCTACCAATCCATCAAA
TTGTTCAGGGTTGTCGGTACAATCTTCATCCAAAGAAGACGTGTCAAGTGGCAAAAATTCTTTGGGTCAGACTCAGCGAGTGAGAAACCCTAATCCTGCTGCAAAGTCTG
TAACGTTCGCTGAAGTAAAAGAAAAGAATCAAAGATTGCCTCCATCTACCAGTGAGGCTTTCACAGGATCCATAATTGAGCGCCCTCCTGCTATACCAAAAAATTCTAAA
CAAGAAACAGAAACTCCATTGCAGCCTTCTGGTTCTCAACCTTCAAAACCAGTATCCAGATTCAAGATGCAAAGAAGATAGCGAGCTGCACACGACAATAACATACTTGA
AAAAAGCTGAAAGTTTTGCCAGCAATTGGTTTTTTTTGCTAGTTTAGATAAAATTTTGTTCAAGTTCTTTACGCCTTGGTCTGGTTCTCCAACAATATTAACTAAAGAGA
TCAGTATTGCCTTAGATTGCAACAGGCAGAAAGACTGACTAACTCTCTGATTAACATACTAAATTTATGGTATGAAACACTTGTGATGGTTCGCTTTACAACAAAAACCT
CACTATTAGTGGTACATCAGCTACCTTTTAAAATCACTACCACTTTACATTTAACTACTTTTTCTACAATGAACCTGAGTTGAAACCTACATTGG
Protein sequenceShow/hide protein sequence
MVKAERLINLVKQEENGKPSVQRMLTAWAESYVRGMQLVSSSYDVLALKFLGIEDVLRCYGVQVFADVMVVRLKPYPIREVEVEGSQNGVIMEAGRAKGTVTPLSSLFPA
QDAHKAATRVQDAISEKQRELEHLLGFISDNANLINLVQKLPEELHHEVMVPFGKAAFFPGRLIHTNEFLVLLGEGYYAERTSKQTVEILKRRGKSLDSQVDSLKAMMDN
LKAEASFFDATASEAEEGLVEIREEYVEGNFSEQESGSGVNKQDVPSVSGVDGAKIVEEDAEYARIMSRLDELEKEEELAAANGDQSDEEDEEEKETADQSLEKFYDDKQ
SYSKGSTSTWLRDENVGSKELLDKYQQQEEASTNPSNCSGLSVQSSSKEDVSSGKNSLGQTQRVRNPNPAAKSVTFAEVKEKNQRLPPSTSEAFTGSIIERPPAIPKNSK
QETETPLQPSGSQPSKPVSRFKMQRR