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Clc02G19160 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G19160
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr02:31769073..31770057
RNA-Seq ExpressionClc02G19160
SyntenyClc02G19160
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054493.1 hypothetical protein E6C27_scaffold24G002720 [Cucumis melo var. makuwa]2.9e-2790Show/hide
Query:  MLVSSHGKKRGLETSTSTSPPCAIFCEELFLPSKRKKCYSAVNNDVDRDPLVAAHIAAQSHFSLRPNIYL
        M+VSSHGKKRGL+  TSTSPPC IFCEELFLPSK+KKCYSAVNNDVDRDPLV AHIAAQSHFSLRPNIYL
Subjt:  MLVSSHGKKRGLETSTSTSPPCAIFCEELFLPSKRKKCYSAVNNDVDRDPLVAAHIAAQSHFSLRPNIYL

KAG5545660.1 hypothetical protein RHGRI_017968 [Rhododendron griersonianum]3.4e-1254.22Show/hide
Query:  MKKLVKCFRKLKKMLVSSHGKKRGLETSTSTSPPCAIFCEELFLPSKRKKCYSAVNNDVDRDPLVAAHIAAQSHFSLRPNIYL
        M+ LVKC+RKLKKML    G         S +P  A+ C+ELFL S  KK    + +D+D DPLVAAH+AAQ HFSLRPNI+L
Subjt:  MKKLVKCFRKLKKMLVSSHGKKRGLETSTSTSPPCAIFCEELFLPSKRKKCYSAVNNDVDRDPLVAAHIAAQSHFSLRPNIYL

KAG6570553.1 hypothetical protein SDJN03_29468, partial [Cucurbita argyrosperma subsp. sororia]7.1e-2677.11Show/hide
Query:  MKKLVKCFRKLKKMLVSSHGKKRGLETSTSTSPPCAIFCEELFLPSKRKKCYSAVNNDVDRDPLVAAHIAAQSHFSLRPNIYL
        MK+LVKCFRKLK++LVSSH +K+G E  TS SPPCAIFCE+LFLPSKRKKCY A NNDVDRDP V    AAQSHFSLRPNIY+
Subjt:  MKKLVKCFRKLKKMLVSSHGKKRGLETSTSTSPPCAIFCEELFLPSKRKKCYSAVNNDVDRDPLVAAHIAAQSHFSLRPNIYL

KAG6604746.1 hypothetical protein SDJN03_02063, partial [Cucurbita argyrosperma subsp. sororia]3.2e-2674.7Show/hide
Query:  MKKLVKCFRKLKKMLVSSHGKKRGLETSTSTSPPCAIFCEELFLPSKRKKCYSAVNNDVDRDPLVAAHIAAQSHFSLRPNIYL
        MKKLVKCFRKLKKMLVSS+G KR  ET  S+S  CA+FCEELFL SKRKKCY +V+NDVD +P VAA +AAQ HFSLRPN+YL
Subjt:  MKKLVKCFRKLKKMLVSSHGKKRGLETSTSTSPPCAIFCEELFLPSKRKKCYSAVNNDVDRDPLVAAHIAAQSHFSLRPNIYL

PQQ16157.1 hypothetical protein Pyn_35673 [Prunus yedoensis var. nudiflora]2.2e-1150.62Show/hide
Query:  MKKLVKCFRKLKKMLVSSHGKKRGLETSTSTSPPCAIFCEELFLPSKRKKCYSAVNNDVDRDPLVAAHIAAQSHFSLRPNI
        M+KL+    KLKKML  S  +    + +   SPPCA+ CEELFLPSK  K +   NN V  +P +A H AAQ+HF+LRPNI
Subjt:  MKKLVKCFRKLKKMLVSSHGKKRGLETSTSTSPPCAIFCEELFLPSKRKKCYSAVNNDVDRDPLVAAHIAAQSHFSLRPNI

TrEMBL top hitse value%identityAlignment
A0A061DKP2 Uncharacterized protein6.5e-0951.81Show/hide
Query:  MKKLVKCFRKLKKMLVSSHGKKRGLETSTSTSPPCAIFCEELFLPSKRKKCYSAVNNDVDRDPLVAAHIAAQSHFSLRPNIYL
        M+ L K  RKLKKML S    ++   +  S  PP A+ CEELF+P K  +       D   DP VAAHIAAQ+HFSLRPNIYL
Subjt:  MKKLVKCFRKLKKMLVSSHGKKRGLETSTSTSPPCAIFCEELFLPSKRKKCYSAVNNDVDRDPLVAAHIAAQSHFSLRPNIYL

A0A1R3KK98 Uncharacterized protein1.1e-0851.76Show/hide
Query:  MKKLVKCFRKLKKMLVSSHGKKRGL--ETSTSTSPPCAIFCEELFLPSKRKKCYSAVNNDVDRDPLVAAHIAAQSHFSLRPNIYL
        M  + K  R LKKML S            + S SPP A+ CEELFL S++KK +     D   DP VAAHIAAQ+HFSLRPNIYL
Subjt:  MKKLVKCFRKLKKMLVSSHGKKRGL--ETSTSTSPPCAIFCEELFLPSKRKKCYSAVNNDVDRDPLVAAHIAAQSHFSLRPNIYL

A0A314ZDI1 Uncharacterized protein1.1e-1150.62Show/hide
Query:  MKKLVKCFRKLKKMLVSSHGKKRGLETSTSTSPPCAIFCEELFLPSKRKKCYSAVNNDVDRDPLVAAHIAAQSHFSLRPNI
        M+KL+    KLKKML  S  +    + +   SPPCA+ CEELFLPSK  K +   NN V  +P +A H AAQ+HF+LRPNI
Subjt:  MKKLVKCFRKLKKMLVSSHGKKRGLETSTSTSPPCAIFCEELFLPSKRKKCYSAVNNDVDRDPLVAAHIAAQSHFSLRPNI

A0A5D3CRI1 Uncharacterized protein1.4e-2790Show/hide
Query:  MLVSSHGKKRGLETSTSTSPPCAIFCEELFLPSKRKKCYSAVNNDVDRDPLVAAHIAAQSHFSLRPNIYL
        M+VSSHGKKRGL+  TSTSPPC IFCEELFLPSK+KKCYSAVNNDVDRDPLV AHIAAQSHFSLRPNIYL
Subjt:  MLVSSHGKKRGLETSTSTSPPCAIFCEELFLPSKRKKCYSAVNNDVDRDPLVAAHIAAQSHFSLRPNIYL

B9SSJ5 Uncharacterized protein3.2e-0850Show/hide
Query:  MKKLVK-CFRKLKKMLVSSHGKKRGLETSTSTSPPCAIFCEELFLPSKRKKCYSAVNNDVDRDPLVAAHIAAQSHFSLRPNIYL
        +KKL++ C RKLK +LV+S  +  G     ST  P A+ CEELFL S+ +   +A  +D D   ++AAHIAAQ+HFS RPNIYL
Subjt:  MKKLVK-CFRKLKKMLVSSHGKKRGLETSTSTSPPCAIFCEELFLPSKRKKCYSAVNNDVDRDPLVAAHIAAQSHFSLRPNIYL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAGCTTGTGAAATGTTTCAGAAAGCTGAAGAAAATGTTGGTGTCCTCACACGGTAAGAAACGCGGACTCGAGACTTCGACTTCGACTTCACCTCCATGTGCCAT
TTTCTGTGAAGAGCTCTTCCTGCCATCAAAAAGGAAAAAGTGTTATAGTGCAGTTAACAATGACGTCGATCGCGATCCTCTCGTAGCAGCTCATATTGCAGCACAGAGCC
ACTTCAGTCTCAGGCCAAACATCTATCTTTAA
mRNA sequenceShow/hide mRNA sequence
AAAGTATTCTCCAACTTCCATACAACACAACCTATAAGGCTCTAAAAGCAGAAAAAGGACAAACCTATTAGTTGCTTTATCATTCATGCATGAAGTAACTACCTAGAGAC
ATACATAAAAGCACACTTGAGACTTCCATGAAATAAACAAAAACACCACCATACAATATATGTGATTCAGTGATTGGCACTCAATATATAAGACGTACAACCAGACAAGC
CAACTAACCAGCTTGGTGAGGATGAAGAAGCTTGTGAAATGTTTCAGAAAGCTGAAGAAAATGTTGGTGTCCTCACACGGTAAGAAACGCGGACTCGAGACTTCGACTTC
GACTTCACCTCCATGTGCCATTTTCTGTGAAGAGCTCTTCCTGCCATCAAAAAGGAAAAAGTGTTATAGTGCAGTTAACAATGACGTCGATCGCGATCCTCTCGTAGCAG
CTCATATTGCAGCACAGAGCCACTTCAGTCTCAGGCCAAACATCTATCTTTAAAAGATAGTGCTCAGTTCCTCCATGAATGAATGATGCTGCTGTTTTACCTCTTGTATT
TCCTATGATATAGTATTTAGTTTAGAAGAAATCCTGTTTAAATGTAGCCATTTTGCTAAATCCATTCCGGTTGCTTCACTCTTGTGACAAATGATAATGAAGGAAACGAT
GTCATTGGTAATATGTGAGAGAGCTGTAAAAGGCCACTGTCATTCTCTGTCTATCAATGAGTTCCCATCTCCAACATACTGTCAGTACAAACAAATCTCAGAGCTGAAAG
TCAAGGCTGAACACAAAGATTTGTGGATGGATGAAAGCTAACACAACAGCAAAAATCCATTCACGAAATCTTCGTATAAGAGTTTCTTTCCTCTTTTCCATCATTCTTTC
TATAGTTACATTAAGTTACAAACAAGGTAAAAACCACCCATATCCTTTGTTGACCATTGCAATATTTCCTACTAGTCTTCGTTCTATAAGTTCATCGACACCAAC
Protein sequenceShow/hide protein sequence
MKKLVKCFRKLKKMLVSSHGKKRGLETSTSTSPPCAIFCEELFLPSKRKKCYSAVNNDVDRDPLVAAHIAAQSHFSLRPNIYL