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Clc02G19200 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G19200
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionProtein RALF-like 17
Genome locationClcChr02:31797857..31798577
RNA-Seq ExpressionClc02G19200
SyntenyClc02G19200
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054503.1 hypothetical protein E6C27_scaffold24G002830 [Cucumis melo var. makuwa]4.8e-4180.34Show/hide
Query:  MAVSRRLAL-LCLGTILLCFLFTRVSAAGSEYGGDIHTVRHSSDTADCNGEHPDKGDQCREENDVVEDDDFDDTYKIVNNIAVTLSATGSILQ-ETEELD
        MA+SRRLAL L LGTIL  FLFTRVSAAGS+YG DIHTVRH SDTADC  EH DKGDQCRE+ND+ EDDDFDDTYKIVNNIA+TLSA+GSILQ + EE D
Subjt:  MAVSRRLAL-LCLGTILLCFLFTRVSAAGSEYGGDIHTVRHSSDTADCNGEHPDKGDQCREENDVVEDDDFDDTYKIVNNIAVTLSATGSILQ-ETEELD

Query:  DIPASEEEVGNMFIVGH
        DIP+SEEE+GNM IVGH
Subjt:  DIPASEEEVGNMFIVGH

KAE8646929.1 hypothetical protein Csa_021071 [Cucumis sativus]1.2e-3475.65Show/hide
Query:  MAVSRRLAL-LCLGTILLCFLFTRVS-AAGSEYGGDIHTVRHSSDTADCNGEHPDKGDQCREENDVVEDDDFDDTYKIVNNIAVTLSATGSIL-QETEEL
        MA+SRRL L L LGTIL CFLF  VS AAG +YG DIHTV+H SDTA+C  EH DKGDQCREEND+ EDDDFDDTYKIVNNIAVTLSA+G IL QETEE 
Subjt:  MAVSRRLAL-LCLGTILLCFLFTRVS-AAGSEYGGDIHTVRHSSDTADCNGEHPDKGDQCREENDVVEDDDFDDTYKIVNNIAVTLSATGSIL-QETEEL

Query:  DDIPASEEEVGNMFI
        +DIP+SEEE+GN+ I
Subjt:  DDIPASEEEVGNMFI

KAG6570557.1 hypothetical protein SDJN03_29472, partial [Cucurbita argyrosperma subsp. sororia]7.2e-3773.04Show/hide
Query:  MAVSRRLALLCLGTILLCFLFTRVSAAGSEYGGDIHTVRHSSDTADCNGEHPDKGDQCREENDVVEDDDFDDTYKIVNNIAVTLSATGSILQETEELDDI
        MAVSRRLALL LGTILLC LFTR + A S+YG DIHTVRHSSD+ +CN E P KGDQCREEND VED+DFDDTYKIVNN+A+ LSA+GS L+E EE DD+
Subjt:  MAVSRRLALLCLGTILLCFLFTRVSAAGSEYGGDIHTVRHSSDTADCNGEHPDKGDQCREENDVVEDDDFDDTYKIVNNIAVTLSATGSILQETEELDDI

Query:  PASEEEVGNMFIVGH
        P  EEE+ N+ IVGH
Subjt:  PASEEEVGNMFIVGH

KAG6604744.1 hypothetical protein SDJN03_02061, partial [Cucurbita argyrosperma subsp. sororia]3.1e-1964.52Show/hide
Query:  MAVSRRLALLCLGTILLCFLFTRVSAAGSEYGGDIHTVRHSSDTADCNGEHPDKGDQCREENDVVEDDDFDDTYKIVNNIAVTLSATGSILQE
        MAVSRRLAL  LGTILLCFL TR + A S++G ++H VR+SS   D      +K  QCR+END V DDDFDDTYKIVNNIA+TLSA+G IL+E
Subjt:  MAVSRRLALLCLGTILLCFLFTRVSAAGSEYGGDIHTVRHSSDTADCNGEHPDKGDQCREENDVVEDDDFDDTYKIVNNIAVTLSATGSILQE

RXH90050.1 hypothetical protein DVH24_032407 [Malus domestica]1.2e-1246.61Show/hide
Query:  MAVSRRLALLCLGTILLCFLFTRVSAAGSEYGGDIHTVRHSSDTADCNGEHPDKGDQCRE-ENDVVEDDDFDDTYKIVNNIAVTLSA-TGSILQETEELD
        MAVSRRL LLCLGT+L      +V+ A   +G             DC+ + P+ GDQCRE E D V DDD DDTYKIVN +AVTLSA TG +  + +EL 
Subjt:  MAVSRRLALLCLGTILLCFLFTRVSAAGSEYGGDIHTVRHSSDTADCNGEHPDKGDQCRE-ENDVVEDDDFDDTYKIVNNIAVTLSA-TGSILQETEELD

Query:  DIPASEE-EVGNMFIVGH
        D   +E+ E  ++ ++GH
Subjt:  DIPASEE-EVGNMFIVGH

TrEMBL top hitse value%identityAlignment
A0A0A0KGZ4 Uncharacterized protein3.5e-3776.27Show/hide
Query:  MAVSRRLAL-LCLGTILLCFLFTRVS-AAGSEYGGDIHTVRHSSDTADCNGEHPDKGDQCREENDVVEDDDFDDTYKIVNNIAVTLSATGSIL-QETEEL
        MA+SRRL L L LGTIL CFLF  VS AAG +YG DIHTV+H SDTA+C  EH DKGDQCREEND+ EDDDFDDTYKIVNNIAVTLSA+G IL QETEE 
Subjt:  MAVSRRLAL-LCLGTILLCFLFTRVS-AAGSEYGGDIHTVRHSSDTADCNGEHPDKGDQCREENDVVEDDDFDDTYKIVNNIAVTLSATGSIL-QETEEL

Query:  DDIPASEEEVGNMFIVGH
        +DIP+SEEE+GN+ IVGH
Subjt:  DDIPASEEEVGNMFIVGH

A0A2N9FLD3 Uncharacterized protein3.5e-1345.45Show/hide
Query:  MAVSRRLALLCLGTILLCFLFTRVSAAG-SEYGGDIHTVRHSSDTADCNGEHPDKGDQCREENDVVE--DDDFDDTYKIVNNIAVTLSA-TG-SILQETE
        MA+SR + L  LGT+L+C L  +VS A  S++   IH ++H  D   C+G HP+ GDQCR ++D  E  DDD DDTYK+VN ++V+ SA TG S   E  
Subjt:  MAVSRRLALLCLGTILLCFLFTRVSAAG-SEYGGDIHTVRHSSDTADCNGEHPDKGDQCREENDVVE--DDDFDDTYKIVNNIAVTLSA-TG-SILQETE

Query:  ELDDIPASEEEVGN-MFIVGH
           D  ++EEE+ N M ++GH
Subjt:  ELDDIPASEEEVGN-MFIVGH

A0A498J3I4 Uncharacterized protein6.0e-1346.61Show/hide
Query:  MAVSRRLALLCLGTILLCFLFTRVSAAGSEYGGDIHTVRHSSDTADCNGEHPDKGDQCRE-ENDVVEDDDFDDTYKIVNNIAVTLSA-TGSILQETEELD
        MAVSRRL LLCLGT+L      +V+ A   +G             DC+ + P+ GDQCRE E D V DDD DDTYKIVN +AVTLSA TG +  + +EL 
Subjt:  MAVSRRLALLCLGTILLCFLFTRVSAAGSEYGGDIHTVRHSSDTADCNGEHPDKGDQCRE-ENDVVEDDDFDDTYKIVNNIAVTLSA-TGSILQETEELD

Query:  DIPASEE-EVGNMFIVGH
        D   +E+ E  ++ ++GH
Subjt:  DIPASEE-EVGNMFIVGH

A0A540N9K5 Uncharacterized protein5.1e-1244.07Show/hide
Query:  MAVSRRLALLCLGTILLCFLFTRVSAAGSEYGGDIHTVRHSSDTADCNGEHPDKGDQCRE-ENDVVEDDDFDDTYKIVNNIAVTLSA-TGSILQETEELD
        MAVSR L LLCLGT+L+     +V+ A  ++G             DC+G+ P+ GDQC+E E+DV+ DDD DDTYKIVN +AVT SA TG +  +  E  
Subjt:  MAVSRRLALLCLGTILLCFLFTRVSAAGSEYGGDIHTVRHSSDTADCNGEHPDKGDQCRE-ENDVVEDDDFDDTYKIVNNIAVTLSA-TGSILQETEELD

Query:  D-IPASEEEVGNMFIVGH
        D   A + E  ++ ++GH
Subjt:  D-IPASEEEVGNMFIVGH

A0A5D3CVV2 Uncharacterized protein2.3e-4180.34Show/hide
Query:  MAVSRRLAL-LCLGTILLCFLFTRVSAAGSEYGGDIHTVRHSSDTADCNGEHPDKGDQCREENDVVEDDDFDDTYKIVNNIAVTLSATGSILQ-ETEELD
        MA+SRRLAL L LGTIL  FLFTRVSAAGS+YG DIHTVRH SDTADC  EH DKGDQCRE+ND+ EDDDFDDTYKIVNNIA+TLSA+GSILQ + EE D
Subjt:  MAVSRRLAL-LCLGTILLCFLFTRVSAAGSEYGGDIHTVRHSSDTADCNGEHPDKGDQCREENDVVEDDDFDDTYKIVNNIAVTLSATGSILQ-ETEELD

Query:  DIPASEEEVGNMFIVGH
        DIP+SEEE+GNM IVGH
Subjt:  DIPASEEEVGNMFIVGH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGTTTCAAGACGACTGGCCCTTCTTTGCCTCGGAACAATCCTTCTCTGCTTCTTGTTCACTAGAGTTTCCGCCGCCGGATCCGAATACGGCGGCGACATTCACAC
CGTCAGGCACTCCTCCGACACCGCCGACTGCAATGGCGAACATCCCGACAAAGGCGACCAATGCAGGGAAGAAAACGACGTGGTTGAGGACGATGATTTCGACGACACCT
ACAAGATCGTCAACAACATCGCCGTAACCCTATCGGCGACCGGCAGTATACTTCAGGAGACGGAGGAATTGGACGATATCCCGGCTTCGGAGGAAGAGGTCGGCAACATG
TTTATAGTGGGGCACTGA
mRNA sequenceShow/hide mRNA sequence
CTTCAATCCCATTACAGTCATCAAACTCCTTCGCCAAAATCATCACTAAAGAAGAGCCCTAATTCTTTTCCTTTCTTTCAGAAAAACCTAAGCCCTAATTTCCCAATCAT
GGCTGTTTCAAGACGACTGGCCCTTCTTTGCCTCGGAACAATCCTTCTCTGCTTCTTGTTCACTAGAGTTTCCGCCGCCGGATCCGAATACGGCGGCGACATTCACACCG
TCAGGCACTCCTCCGACACCGCCGACTGCAATGGCGAACATCCCGACAAAGGCGACCAATGCAGGGAAGAAAACGACGTGGTTGAGGACGATGATTTCGACGACACCTAC
AAGATCGTCAACAACATCGCCGTAACCCTATCGGCGACCGGCAGTATACTTCAGGAGACGGAGGAATTGGACGATATCCCGGCTTCGGAGGAAGAGGTCGGCAACATGTT
TATAGTGGGGCACTGAGCGGCGGCGAAATCACTCTGTTTTTTTCTTTTTTTAATTTTTTTTTTCCTTTCATGGTATTGGACGGAAGTTAAAATGCTTTAATTTCTTTTAA
ATTTTTTAATTCCGAAATTATTATCGTCTTTGGTTTCTTCTTATTGCGGCATAAGAGATCAGGCACGTGCATGGTGGTGGATAATGTGCGGATCAGCGTCCATCGATTGA
GAGCTAGTTAATTAAGGGATAGTAAAAATTACAAAAGTTGGGGAGAGAAATATTACTGTGG
Protein sequenceShow/hide protein sequence
MAVSRRLALLCLGTILLCFLFTRVSAAGSEYGGDIHTVRHSSDTADCNGEHPDKGDQCREENDVVEDDDFDDTYKIVNNIAVTLSATGSILQETEELDDIPASEEEVGNM
FIVGH