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Clc02G19235 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G19235
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionWLM domain-containing protein
Genome locationClcChr02:31811151..31811452
RNA-Seq ExpressionClc02G19235
SyntenyClc02G19235
Gene Ontology termsGO:0006850 - mitochondrial pyruvate transmembrane transport (biological process)
GO:0005743 - mitochondrial inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646929.1 hypothetical protein Csa_021071 [Cucumis sativus]8.1e-1797.92Show/hide
Query:  ALEILFLIGFIEDALLDEIGKAETFLVLKRNDPGLLWLAKSTIETCNA
        ALEILFLIGFIEDALLDEIGKAETFLVLKRNDPGLLWLAKST+ETCNA
Subjt:  ALEILFLIGFIEDALLDEIGKAETFLVLKRNDPGLLWLAKSTIETCNA
XP_004143191.3 uncharacterized protein LOC101220832 [Cucumis sativus]8.1e-1797.92Show/hide
Query:  ALEILFLIGFIEDALLDEIGKAETFLVLKRNDPGLLWLAKSTIETCNA
        ALEILFLIGFIEDALLDEIGKAETFLVLKRNDPGLLWLAKST+ETCNA
Subjt:  ALEILFLIGFIEDALLDEIGKAETFLVLKRNDPGLLWLAKSTIETCNA
XP_008456391.1 PREDICTED: uncharacterized protein LOC103496343 [Cucumis melo]8.1e-1797.92Show/hide
Query:  ALEILFLIGFIEDALLDEIGKAETFLVLKRNDPGLLWLAKSTIETCNA
        ALEILFLIGFIEDALLDEIGKAETFLVLKRNDPGLLWLAKST+ETCNA
Subjt:  ALEILFLIGFIEDALLDEIGKAETFLVLKRNDPGLLWLAKSTIETCNA
XP_022149685.1 uncharacterized protein LOC111018052 [Momordica charantia]5.3e-1676.56Show/hide
Query:  RRMLPTIK------VTALEILFLIGFIEDALLDEIGKAETFLVLKRNDPGLLWLAKSTIETCNA
        R+  PTI+        ALEILFLIGFIED LLDEIGK ETFLVLKRNDPGLLWLAKST+ETCNA
Subjt:  RRMLPTIK------VTALEILFLIGFIEDALLDEIGKAETFLVLKRNDPGLLWLAKSTIETCNA
XP_038901675.1 uncharacterized protein LOC120088443 [Benincasa hispida]8.1e-1797.92Show/hide
Query:  ALEILFLIGFIEDALLDEIGKAETFLVLKRNDPGLLWLAKSTIETCNA
        ALEILFLIGFIEDALLDEIGKAETFLVLKRNDPGLLWLAKST+ETCNA
Subjt:  ALEILFLIGFIEDALLDEIGKAETFLVLKRNDPGLLWLAKSTIETCNA
TrEMBL top hitse value%identityAlignment
A0A0A0KF59 WLM domain-containing protein3.9e-1797.92Show/hide
Query:  ALEILFLIGFIEDALLDEIGKAETFLVLKRNDPGLLWLAKSTIETCNA
        ALEILFLIGFIEDALLDEIGKAETFLVLKRNDPGLLWLAKST+ETCNA
Subjt:  ALEILFLIGFIEDALLDEIGKAETFLVLKRNDPGLLWLAKSTIETCNA
A0A1S3C3T6 uncharacterized protein LOC1034963433.9e-1797.92Show/hide
Query:  ALEILFLIGFIEDALLDEIGKAETFLVLKRNDPGLLWLAKSTIETCNA
        ALEILFLIGFIEDALLDEIGKAETFLVLKRNDPGLLWLAKST+ETCNA
Subjt:  ALEILFLIGFIEDALLDEIGKAETFLVLKRNDPGLLWLAKSTIETCNA
A0A5A7UHQ6 Putative Ubiquitin and WLM domain-containing protein3.9e-1797.92Show/hide
Query:  ALEILFLIGFIEDALLDEIGKAETFLVLKRNDPGLLWLAKSTIETCNA
        ALEILFLIGFIEDALLDEIGKAETFLVLKRNDPGLLWLAKST+ETCNA
Subjt:  ALEILFLIGFIEDALLDEIGKAETFLVLKRNDPGLLWLAKSTIETCNA
A0A6J1D6E8 uncharacterized protein LOC1110180522.6e-1676.56Show/hide
Query:  RRMLPTIK------VTALEILFLIGFIEDALLDEIGKAETFLVLKRNDPGLLWLAKSTIETCNA
        R+  PTI+        ALEILFLIGFIED LLDEIGK ETFLVLKRNDPGLLWLAKST+ETCNA
Subjt:  RRMLPTIK------VTALEILFLIGFIEDALLDEIGKAETFLVLKRNDPGLLWLAKSTIETCNA
A0A6J1JF11 uncharacterized protein LOC1114838262.2e-1595.74Show/hide
Query:  ALEILFLIGFIEDALLDEIGKAETFLVLKRNDPGLLWLAKSTIETCN
        ALEILFLIGFIEDALLDEIGKAETFLVLKRNDPGLLWLAKST+ET N
Subjt:  ALEILFLIGFIEDALLDEIGKAETFLVLKRNDPGLLWLAKSTIETCN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G35690.1 CONTAINS InterPro DOMAIN/s: WLM (InterPro:IPR013536), PUB domain (InterPro:IPR018997), PUG domain (InterPro:IPR006567)3.9e-0956.82Show/hide
Query:  ALEILFLIGFIEDALLDEIGKAETFLVLKRNDPGLLWLAKSTIE
        A+EIL ++GF+++ + +  G  E +LVLKRNDPGLLW+AKS IE
Subjt:  ALEILFLIGFIEDALLDEIGKAETFLVLKRNDPGLLWLAKSTIE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCTTAATCCCATTATCTAGAAGAATGTTGCCAACTATAAAGGTTACTGCATTGGAGATCCTGTTCTTGATAGGTTTCATTGAAGATGCACTGCTAGATGAAATCGG
GAAGGCAGAAACATTCCTTGTACTGAAGCGCAATGATCCTGGCTTATTGTGGCTTGCGAAATCTACCATTGAAACATGCAATGCCCCGTAG
mRNA sequenceShow/hide mRNA sequence
ATGATCTTAATCCCATTATCTAGAAGAATGTTGCCAACTATAAAGGTTACTGCATTGGAGATCCTGTTCTTGATAGGTTTCATTGAAGATGCACTGCTAGATGAAATCGG
GAAGGCAGAAACATTCCTTGTACTGAAGCGCAATGATCCTGGCTTATTGTGGCTTGCGAAATCTACCATTGAAACATGCAATGCCCCGTAG
Protein sequenceShow/hide protein sequence
MILIPLSRRMLPTIKVTALEILFLIGFIEDALLDEIGKAETFLVLKRNDPGLLWLAKSTIETCNAP