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Clc02G21160 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G21160
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionTransmembrane protein
Genome locationClcChr02:33473336..33474573
RNA-Seq ExpressionClc02G21160
SyntenyClc02G21160
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008464105.1 PREDICTED: uncharacterized protein LOC103502067 [Cucumis melo]2.9e-4776.74Show/hide
Query:  MASTTSISLSLPIFLSSSNLLPTLRPS------SSTALSRRRTLLIPNPLQQNRQKGISIWRLH-ATSEETFASDSAGLV-EKSQEIV-STTDDGVSTII
        MASTTSISLSLPI LSSSNLLPTLR S      SSTALS R TL + NPL+QNRQK +S   +H ATSE+T ASDSA LV EKSQ+IV ST DDGVSTII
Subjt:  MASTTSISLSLPIFLSSSNLLPTLRPS------SSTALSRRRTLLIPNPLQQNRQKGISIWRLH-ATSEETFASDSAGLV-EKSQEIV-STTDDGVSTII

Query:  SVLLFVAFIGLSILTIGVIYIALTDFLQKREKEKFEKEEAG-KKKSGKKKKVKAKGGPKGFGQKIEEEEEED
        SVLLF+AFIGLSILTIGVIYI +TDFLQKREKEKFEKEEAG KKKSGKKKKV+A+ GP+GFGQK+EEEE+++
Subjt:  SVLLFVAFIGLSILTIGVIYIALTDFLQKREKEKFEKEEAG-KKKSGKKKKVKAKGGPKGFGQKIEEEEEED

XP_022148488.1 uncharacterized protein LOC111017113 [Momordica charantia]5.6e-4372.89Show/hide
Query:  MASTTSISLSLPIFLSSSNLLP----TLRPSSS-TALSRRRTLLIPNPLQQNRQKGISIWRLHATSEETFASDSAGLVEKSQEIVSTTDDGVSTIISVLL
        MA+T S SLSLPIFLS+ N  P     LR SS+   LSRR  LL+ NPL+QN  +G SI RLHATSE+T AS+SA LVEKSQEI S+ DDGVSTIIS LL
Subjt:  MASTTSISLSLPIFLSSSNLLP----TLRPSSS-TALSRRRTLLIPNPLQQNRQKGISIWRLHATSEETFASDSAGLVEKSQEIVSTTDDGVSTIISVLL

Query:  FVAFIGLSILTIGVIYIALTDFLQKREKEKFEKEEAGK-KKSGKKKKVKAKGGPKGFGQKIEEEEE
        FVAFIGLSILTIGVIYIA+TDFLQKREKEKFEK E  K KKSGKKKKV+A+ GP+GFGQKIEEEE+
Subjt:  FVAFIGLSILTIGVIYIALTDFLQKREKEKFEKEEAGK-KKSGKKKKVKAKGGPKGFGQKIEEEEE

XP_022947295.1 uncharacterized protein LOC111451198 [Cucurbita moschata]2.1e-4272.51Show/hide
Query:  MASTTSISLSLPIFLSSSN----LLPTLRPS-----SSTALSRRRTLLIPNPLQQNRQKGISIWRLHATSEETFASDSAGLVEKSQEIVSTTDDGVSTII
        MA+TTS SLSLPIFLSSSN     LP+LR S     SS  LSRR   L+   L QNR +  SI RLHA SEET AS+SA LVEKSQEI ST DDGVSTII
Subjt:  MASTTSISLSLPIFLSSSN----LLPTLRPS-----SSTALSRRRTLLIPNPLQQNRQKGISIWRLHATSEETFASDSAGLVEKSQEIVSTTDDGVSTII

Query:  SVLLFVAFIGLSILTIGVIYIALTDFLQKREKEKFEKEEAGKKKSGKKK--KVKAKGGPKGFGQKIEEEEE
        SVLLFVAF+GLS+LTIGVIYIA+TDFLQKREKEKFEKEEA  KKSGKKK  KVKAK GP+GFGQK+E+EE+
Subjt:  SVLLFVAFIGLSILTIGVIYIALTDFLQKREKEKFEKEEAGKKKSGKKK--KVKAKGGPKGFGQKIEEEEE

XP_023532311.1 uncharacterized protein LOC111794502 [Cucurbita pepo subsp. pepo]2.8e-4272.51Show/hide
Query:  MASTTSISLSLPIFLSSSN----LLPTLRPS-----SSTALSRRRTLLIPNPLQQNRQKGISIWRLHATSEETFASDSAGLVEKSQEIVSTTDDGVSTII
        MA+TTS SLSLPIFLSSSN     LP+LR S     SS  LSRR   L+   L QNR +  SI RLHA SEET AS+SA LVEKSQEI ST DDGVSTII
Subjt:  MASTTSISLSLPIFLSSSN----LLPTLRPS-----SSTALSRRRTLLIPNPLQQNRQKGISIWRLHATSEETFASDSAGLVEKSQEIVSTTDDGVSTII

Query:  SVLLFVAFIGLSILTIGVIYIALTDFLQKREKEKFEKEEAGKKKSGKKK--KVKAKGGPKGFGQKIEEEEE
        SVLLFVAFIGLS+LTIGVIYIA+TDFLQKREKEKFEKEEA  KKSGKKK  KVKA+ GP+GFGQK+E+EE+
Subjt:  SVLLFVAFIGLSILTIGVIYIALTDFLQKREKEKFEKEEAGKKKSGKKK--KVKAKGGPKGFGQKIEEEEE

XP_038901778.1 uncharacterized protein LOC120088501 [Benincasa hispida]8.9e-5783.72Show/hide
Query:  MASTTSISLSLPIFLSSSN-----LLPTLRPS------SSTALSRRRTLLIPNPLQQNRQKGISIWRLHATSEETFASDSAGLVEKSQEIVSTTDDGVST
        MAST S  LSLPIFLSS N     LLPTLR S      SST  SRRRTLLIPNPL QNRQK ISI RLHATSE+T ASDSA LVEKSQEIVSTTDDGVST
Subjt:  MASTTSISLSLPIFLSSSN-----LLPTLRPS------SSTALSRRRTLLIPNPLQQNRQKGISIWRLHATSEETFASDSAGLVEKSQEIVSTTDDGVST

Query:  IISVLLFVAFIGLSILTIGVIYIALTDFLQKREKEKFEKEEAGKKKSGKKKKVKAKGGPKGFGQKIEEEEEE
        IISVLLFVAFIGLSILTIGVIYIA+TDFLQKREKEKFEKEEAGKKKSGKKKKVKAKGGP+GFGQK+EEEEE+
Subjt:  IISVLLFVAFIGLSILTIGVIYIALTDFLQKREKEKFEKEEAGKKKSGKKKKVKAKGGPKGFGQKIEEEEEE

TrEMBL top hitse value%identityAlignment
A0A0A0KFD7 Uncharacterized protein2.4e-4776.88Show/hide
Query:  MASTTSISLSLPIFLSSSNLLPTLRPSS------STALSRRRTLLIPNPLQQNRQKGISIWRLH-ATSEETFASDSAGLV--EKSQEIV-STTDDGVSTI
        MASTT ISLSLPI LSSSNLLPTLR SS      STAL  R TL + NPL+QNRQK +SI R+H ATS++T  SDSA L+  EKSQEIV ST DDGVSTI
Subjt:  MASTTSISLSLPIFLSSSNLLPTLRPSS------STALSRRRTLLIPNPLQQNRQKGISIWRLH-ATSEETFASDSAGLV--EKSQEIV-STTDDGVSTI

Query:  ISVLLFVAFIGLSILTIGVIYIALTDFLQKREKEKFEKEEAG-KKKSGKKKKVKAKGGPKGFGQKIEEEEEED
        ISVLLF AFIGLSILTIGVIYI +TDFLQKREKEKFEKEEAG KKKSGKKKKV+A+GGP+GFGQK+E EEEED
Subjt:  ISVLLFVAFIGLSILTIGVIYIALTDFLQKREKEKFEKEEAG-KKKSGKKKKVKAKGGPKGFGQKIEEEEEED

A0A1S3CM77 uncharacterized protein LOC1035020671.4e-4776.74Show/hide
Query:  MASTTSISLSLPIFLSSSNLLPTLRPS------SSTALSRRRTLLIPNPLQQNRQKGISIWRLH-ATSEETFASDSAGLV-EKSQEIV-STTDDGVSTII
        MASTTSISLSLPI LSSSNLLPTLR S      SSTALS R TL + NPL+QNRQK +S   +H ATSE+T ASDSA LV EKSQ+IV ST DDGVSTII
Subjt:  MASTTSISLSLPIFLSSSNLLPTLRPS------SSTALSRRRTLLIPNPLQQNRQKGISIWRLH-ATSEETFASDSAGLV-EKSQEIV-STTDDGVSTII

Query:  SVLLFVAFIGLSILTIGVIYIALTDFLQKREKEKFEKEEAG-KKKSGKKKKVKAKGGPKGFGQKIEEEEEED
        SVLLF+AFIGLSILTIGVIYI +TDFLQKREKEKFEKEEAG KKKSGKKKKV+A+ GP+GFGQK+EEEE+++
Subjt:  SVLLFVAFIGLSILTIGVIYIALTDFLQKREKEKFEKEEAG-KKKSGKKKKVKAKGGPKGFGQKIEEEEEED

A0A5A7V864 Uncharacterized protein1.4e-4776.74Show/hide
Query:  MASTTSISLSLPIFLSSSNLLPTLRPS------SSTALSRRRTLLIPNPLQQNRQKGISIWRLH-ATSEETFASDSAGLV-EKSQEIV-STTDDGVSTII
        MASTTSISLSLPI LSSSNLLPTLR S      SSTALS R TL + NPL+QNRQK +S   +H ATSE+T ASDSA LV EKSQ+IV ST DDGVSTII
Subjt:  MASTTSISLSLPIFLSSSNLLPTLRPS------SSTALSRRRTLLIPNPLQQNRQKGISIWRLH-ATSEETFASDSAGLV-EKSQEIV-STTDDGVSTII

Query:  SVLLFVAFIGLSILTIGVIYIALTDFLQKREKEKFEKEEAG-KKKSGKKKKVKAKGGPKGFGQKIEEEEEED
        SVLLF+AFIGLSILTIGVIYI +TDFLQKREKEKFEKEEAG KKKSGKKKKV+A+ GP+GFGQK+EEEE+++
Subjt:  SVLLFVAFIGLSILTIGVIYIALTDFLQKREKEKFEKEEAG-KKKSGKKKKVKAKGGPKGFGQKIEEEEEED

A0A6J1D484 uncharacterized protein LOC1110171132.7e-4372.89Show/hide
Query:  MASTTSISLSLPIFLSSSNLLP----TLRPSSS-TALSRRRTLLIPNPLQQNRQKGISIWRLHATSEETFASDSAGLVEKSQEIVSTTDDGVSTIISVLL
        MA+T S SLSLPIFLS+ N  P     LR SS+   LSRR  LL+ NPL+QN  +G SI RLHATSE+T AS+SA LVEKSQEI S+ DDGVSTIIS LL
Subjt:  MASTTSISLSLPIFLSSSNLLP----TLRPSSS-TALSRRRTLLIPNPLQQNRQKGISIWRLHATSEETFASDSAGLVEKSQEIVSTTDDGVSTIISVLL

Query:  FVAFIGLSILTIGVIYIALTDFLQKREKEKFEKEEAGK-KKSGKKKKVKAKGGPKGFGQKIEEEEE
        FVAFIGLSILTIGVIYIA+TDFLQKREKEKFEK E  K KKSGKKKKV+A+ GP+GFGQKIEEEE+
Subjt:  FVAFIGLSILTIGVIYIALTDFLQKREKEKFEKEEAGK-KKSGKKKKVKAKGGPKGFGQKIEEEEE

A0A6J1G6G9 uncharacterized protein LOC1114511981.0e-4272.51Show/hide
Query:  MASTTSISLSLPIFLSSSN----LLPTLRPS-----SSTALSRRRTLLIPNPLQQNRQKGISIWRLHATSEETFASDSAGLVEKSQEIVSTTDDGVSTII
        MA+TTS SLSLPIFLSSSN     LP+LR S     SS  LSRR   L+   L QNR +  SI RLHA SEET AS+SA LVEKSQEI ST DDGVSTII
Subjt:  MASTTSISLSLPIFLSSSN----LLPTLRPS-----SSTALSRRRTLLIPNPLQQNRQKGISIWRLHATSEETFASDSAGLVEKSQEIVSTTDDGVSTII

Query:  SVLLFVAFIGLSILTIGVIYIALTDFLQKREKEKFEKEEAGKKKSGKKK--KVKAKGGPKGFGQKIEEEEE
        SVLLFVAF+GLS+LTIGVIYIA+TDFLQKREKEKFEKEEA  KKSGKKK  KVKAK GP+GFGQK+E+EE+
Subjt:  SVLLFVAFIGLSILTIGVIYIALTDFLQKREKEKFEKEEAGKKKSGKKK--KVKAKGGPKGFGQKIEEEEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G29180.1 unknown protein3.5e-1943.64Show/hide
Query:  MASTTSISLSLPIFLSSSNLLPTLRPSSSTALSRRRTLLIPNPLQQNRQKGISIWRLHAT----SEETFASDSAGLVEKSQEIVSTTDDGVSTIISVLLF
        M++TT+ SLSL  F             S  + S  R  ++   + +  Q+   +WR+ AT    S+E  +SDS+        + S   DGV+ II VLLF
Subjt:  MASTTSISLSLPIFLSSSNLLPTLRPSSSTALSRRRTLLIPNPLQQNRQKGISIWRLHAT----SEETFASDSAGLVEKSQEIVSTTDDGVSTIISVLLF

Query:  VAFIGLSILTIGVIYIALTDFLQKREKEKFEKEEAGK--KKSGKKKKVKAKGGPKGFGQKIEEEE
        VAF+ L++LTIGV+YI +T+FL KRE+EKFEK+EA K  KK GKKK ++A+ GP+GFGQKIE+++
Subjt:  VAFIGLSILTIGVIYIALTDFLQKREKEKFEKEEAGK--KKSGKKKKVKAKGGPKGFGQKIEEEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCCACCACATCCATTTCTCTATCTCTACCCATTTTCCTCTCCTCTTCCAACCTTCTTCCTACTCTCCGCCCTTCCTCATCCACCGCTCTCTCTCGCCGACGAAC
ACTTCTCATTCCGAATCCTCTCCAACAAAATCGTCAAAAAGGAATCTCAATTTGGAGGCTCCATGCCACATCTGAAGAAACTTTCGCCTCCGATTCCGCCGGACTGGTGG
AGAAATCGCAGGAGATAGTATCCACCACTGACGACGGCGTTTCCACAATAATCTCCGTCCTTCTCTTCGTCGCGTTCATCGGTCTATCTATTCTCACAATCGGGGTGATC
TACATTGCCCTGACGGATTTCTTGCAGAAGAGAGAGAAGGAAAAGTTTGAGAAAGAGGAAGCGGGGAAGAAGAAGAGTGGGAAAAAGAAGAAGGTGAAAGCTAAAGGCGG
ACCGAAAGGATTCGGGCAGAAGATTGAAGAAGAAGAAGAAGAAGATTGA
mRNA sequenceShow/hide mRNA sequence
TTTGGAACATTTTTTATTTTGGGTTCCAAAATGGGTTAGCTGAATAATTTCACGACGAGGAAACGATAAGGACCCTTTCACGACGACGAAACGATCTCGTGGATCTGAAC
AGCGAGGATGCGTTTCCCACTGGCGCAGTGAGAGAGAATACTGAAGCGGATGAGCCATGGCCTCCACCACATCCATTTCTCTATCTCTACCCATTTTCCTCTCCTCTTCC
AACCTTCTTCCTACTCTCCGCCCTTCCTCATCCACCGCTCTCTCTCGCCGACGAACACTTCTCATTCCGAATCCTCTCCAACAAAATCGTCAAAAAGGAATCTCAATTTG
GAGGCTCCATGCCACATCTGAAGAAACTTTCGCCTCCGATTCCGCCGGACTGGTGGAGAAATCGCAGGAGATAGTATCCACCACTGACGACGGCGTTTCCACAATAATCT
CCGTCCTTCTCTTCGTCGCGTTCATCGGTCTATCTATTCTCACAATCGGGGTGATCTACATTGCCCTGACGGATTTCTTGCAGAAGAGAGAGAAGGAAAAGTTTGAGAAA
GAGGAAGCGGGGAAGAAGAAGAGTGGGAAAAAGAAGAAGGTGAAAGCTAAAGGCGGACCGAAAGGATTCGGGCAGAAGATTGAAGAAGAAGAAGAAGAAGATTGATGTTA
AGGATTAATACGAGAAGCAAATTCTGGAAATCCTATTTATGGTACTGTCTAATCTTTCCCATAAATTCTGATGAATTTGCTTCACGTTGTTGCCTTAGGGCATCGAATTT
TTACTCTCATGAATTTTTGGCTTTTCTTTTTTATCGTTAACTGAATGTTTTCTCTCTCTCTCTCTCTCTCTCCTTGTGATGATCATCCAGTTTAACGAAATTAAAATACA
GTTTAATTTTCTATATCTGTTTCCCCTGAAACTATAATTTGTTTAGTACAATTGACAAGAAACTAAAAAAAAACGAGGGGGAAAGGAATGATTGAAGCCTTGATTGTTCA
AATGTTAGTAAAAACATCAAAATCAAGCATTTTTCAAATGGTGAAGACTAAACTCATTTGATACAAAACTCAAATACTATTTACGAATATGATCTTATCATAATTTCGTA
AACTTTGAATCAGTAATTTAACATAACCATACAATAAGCATCTTGATAAA
Protein sequenceShow/hide protein sequence
MASTTSISLSLPIFLSSSNLLPTLRPSSSTALSRRRTLLIPNPLQQNRQKGISIWRLHATSEETFASDSAGLVEKSQEIVSTTDDGVSTIISVLLFVAFIGLSILTIGVI
YIALTDFLQKREKEKFEKEEAGKKKSGKKKKVKAKGGPKGFGQKIEEEEEED