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Clc02G22210 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G22210
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr02:34347494..34348638
RNA-Seq ExpressionClc02G22210
SyntenyClc02G22210
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035320.1 hypothetical protein E6C27_scaffold228G001200 [Cucumis melo var. makuwa]3.3e-2071.6Show/hide
Query:  MQSKIGSQGLPLCVSAFTFSNHSLSNEMADHDRRREAMRMKMQRSRNMEEYRLLEVIREGDLEGFVDEFCETNLICVAKAA
        MQSKIGSQGLPLC+SAFT SNHSLS ++ADHDRRREAM+ + QRS NM +YR LE IREGDLE FV+E     +IC AKAA
Subjt:  MQSKIGSQGLPLCVSAFTFSNHSLSNEMADHDRRREAMRMKMQRSRNMEEYRLLEVIREGDLEGFVDEFCETNLICVAKAA

KAG6605527.1 hypothetical protein SDJN03_02844, partial [Cucurbita argyrosperma subsp. sororia]1.4e-0543.9Show/hide
Query:  MQSKIGSQGLPLCVSAFTFSNHSLSNEMADHDRRREAMRMKMQRSRNMEEYRLLEVIREGDLEGFVDEFCE-TNLICVAKAA
        M SK+ S GLPLC+S F+ S+  L+ EM DHDRRREAMR +   S +         I +   +G + + CE T L   AKAA
Subjt:  MQSKIGSQGLPLCVSAFTFSNHSLSNEMADHDRRREAMRMKMQRSRNMEEYRLLEVIREGDLEGFVDEFCE-TNLICVAKAA

KGN47309.1 hypothetical protein Csa_022984 [Cucumis sativus]9.6e-2070.37Show/hide
Query:  MQSKIGSQGLPLCVSAFTFSNHSLSNEMADHDRRREAMRMKMQRSRNMEEYRLLEVIREGDLEGFVDEFCETNLICVAKAA
        MQSKIGSQGLPLC+SAFT SNHSLS ++ADHDRRREAM+ + +RS NM ++RLLE IREGDLE FV+E     +IC AKAA
Subjt:  MQSKIGSQGLPLCVSAFTFSNHSLSNEMADHDRRREAMRMKMQRSRNMEEYRLLEVIREGDLEGFVDEFCETNLICVAKAA

PQM33250.1 uncharacterized protein Pyn_24942 [Prunus yedoensis var. nudiflora]3.9e-0543.43Show/hide
Query:  MQSKI---GSQGLPLCVSAFTFSNHSLSNEMADHDRRREAMRMKMQRSR-----NME------EYRLLEVIREG----DLEGFVDEFCETNLICVAKAA
        MQS +   G+ GLPLCVS  T  + + S EMADHDRRREAM+ +  ++R     N E        R+ E IREG    DL   + + C   L C AKAA
Subjt:  MQSKI---GSQGLPLCVSAFTFSNHSLSNEMADHDRRREAMRMKMQRSR-----NME------EYRLLEVIREG----DLEGFVDEFCETNLICVAKAA

XP_023006923.1 uncharacterized protein LOC111499567 [Cucurbita maxima]1.6e-0646.34Show/hide
Query:  MQSKIGSQGLPLCVSAFTFSNHSLSNEMADHDRRREAMRMKMQRSRNMEEYRLLEVIREGDLEGFVDEFCE-TNLICVAKAA
        M SK+ S GLPLC+S F+ S+ SLS EM DHDRRREAMR +   S +         I +   +G + + CE T L   AKAA
Subjt:  MQSKIGSQGLPLCVSAFTFSNHSLSNEMADHDRRREAMRMKMQRSRNMEEYRLLEVIREGDLEGFVDEFCE-TNLICVAKAA

TrEMBL top hitse value%identityAlignment
A0A0A0KEP9 Uncharacterized protein4.7e-2070.37Show/hide
Query:  MQSKIGSQGLPLCVSAFTFSNHSLSNEMADHDRRREAMRMKMQRSRNMEEYRLLEVIREGDLEGFVDEFCETNLICVAKAA
        MQSKIGSQGLPLC+SAFT SNHSLS ++ADHDRRREAM+ + +RS NM ++RLLE IREGDLE FV+E     +IC AKAA
Subjt:  MQSKIGSQGLPLCVSAFTFSNHSLSNEMADHDRRREAMRMKMQRSRNMEEYRLLEVIREGDLEGFVDEFCETNLICVAKAA

A0A2P6QHM8 Uncharacterized protein2.5e-0544.9Show/hide
Query:  MQSKI---GSQGLPLCVSAFTFSNHSLSNEMADHDRRREAMRMKMQRSRNMEEY-------------RLLEVIREGDLEGFVDEFCETNLI-CVAKAA
        MQS +   G+ GLPLCVS  T     L++EMADHDRRREA  MK QRSR  EE              R+ E I +GDL   + +     L  C+AKAA
Subjt:  MQSKI---GSQGLPLCVSAFTFSNHSLSNEMADHDRRREAMRMKMQRSRNMEEY-------------RLLEVIREGDLEGFVDEFCETNLI-CVAKAA

A0A314UD00 Uncharacterized protein1.9e-0543.43Show/hide
Query:  MQSKI---GSQGLPLCVSAFTFSNHSLSNEMADHDRRREAMRMKMQRSR-----NME------EYRLLEVIREG----DLEGFVDEFCETNLICVAKAA
        MQS +   G+ GLPLCVS  T  + + S EMADHDRRREAM+ +  ++R     N E        R+ E IREG    DL   + + C   L C AKAA
Subjt:  MQSKI---GSQGLPLCVSAFTFSNHSLSNEMADHDRRREAMRMKMQRSR-----NME------EYRLLEVIREG----DLEGFVDEFCETNLICVAKAA

A0A5D3CSY7 Uncharacterized protein1.6e-2071.6Show/hide
Query:  MQSKIGSQGLPLCVSAFTFSNHSLSNEMADHDRRREAMRMKMQRSRNMEEYRLLEVIREGDLEGFVDEFCETNLICVAKAA
        MQSKIGSQGLPLC+SAFT SNHSLS ++ADHDRRREAM+ + QRS NM +YR LE IREGDLE FV+E     +IC AKAA
Subjt:  MQSKIGSQGLPLCVSAFTFSNHSLSNEMADHDRRREAMRMKMQRSRNMEEYRLLEVIREGDLEGFVDEFCETNLICVAKAA

A0A6J1L6A3 uncharacterized protein LOC1114995677.7e-0746.34Show/hide
Query:  MQSKIGSQGLPLCVSAFTFSNHSLSNEMADHDRRREAMRMKMQRSRNMEEYRLLEVIREGDLEGFVDEFCE-TNLICVAKAA
        M SK+ S GLPLC+S F+ S+ SLS EM DHDRRREAMR +   S +         I +   +G + + CE T L   AKAA
Subjt:  MQSKIGSQGLPLCVSAFTFSNHSLSNEMADHDRRREAMRMKMQRSRNMEEYRLLEVIREGDLEGFVDEFCE-TNLICVAKAA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTCCAAGATTGGATCTCAAGGTCTTCCTCTCTGTGTTTCAGCCTTCACTTTCTCTAATCATTCCCTCTCTAATGAAATGGCAGATCATGATCGAAGGAGGGAAGC
CATGAGAATGAAAATGCAAAGATCAAGAAACATGGAAGAATACAGGTTGTTGGAAGTTATTAGAGAGGGAGATCTTGAGGGTTTCGTCGATGAATTCTGTGAAACCAACT
TAATTTGTGTTGCAAAAGCTGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATTATATCAACACCCATTCGGTTTGTTTCTTTGTTTGAAGGCACAGGGAGAATTAATCTGGCACCAAAGGCCCCTCCAAAAGCCCCAGAAAACCAAACCCATGCTTTAGA
TTTTTTATTCTCTCTCTTTTCTTCTTCTATTTTTCTCCATCAAACAACTGAAAGAAACCGCAATTCCTCTGTTTCTTCTTCTTCCTCCTCCTTGTCAGAGAAATGCAGTC
CAAGATTGGATCTCAAGGTCTTCCTCTCTGTGTTTCAGCCTTCACTTTCTCTAATCATTCCCTCTCTAATGAAATGGCAGATCATGATCGAAGGAGGGAAGCCATGAGAA
TGAAAATGCAAAGATCAAGAAACATGGAAGAATACAGGTTGTTGGAAGTTATTAGAGAGGGAGATCTTGAGGGTTTCGTCGATGAATTCTGTGAAACCAACTTAATTTGT
GTTGCAAAAGCTGCTTAGATTATAAAAAACAGAGTCTATGATCTGGGTTTTGTTGGGTTTGGATCTGTCTTTTCATATATTTTGTCAATTCTGATCTAGGTTCGTTTTAT
GTATTGTTCTTGTTCGATCTGAAATGGGATTATTCGGCTCTAAAATGGTAAAAAATTTGACTTGTTATGGATGTAAGCTAGAAAAATTTCAAGAACTTGTTTGTCATTTA
GTAGATTTTTTAATTGATGAAGATGTAACAAACAAAATAAAACTGTTTTATTTATTTATTATTAAAAGATGAAAGAGGATATTGAGTAGAATAAAGTTAAAATAAATTAT
AAATGAAGGAGGTGGGAAAGGGAAGGGTGAGAAGATAGGTTGGGACACGAAAGTAGAAATATTTGAACAAAATGAGACCACGTTTCACATGTCCTTATGTTATTTATTCT
ATATATATATATATAGTATATTTACTATCCATTTTGTCTTTACATTTTCTAGTAGACTCGAATGTTGCACTTTGTCTTTACATTTTCTAGTAGACTCAAATGTTGCACTT
TCATGACAAGCTGCTGCGGGTTTTTGAGTGTTGGTGTTTGTGTTGGTGTTTGTTCGAAAGATAATG
Protein sequenceShow/hide protein sequence
MQSKIGSQGLPLCVSAFTFSNHSLSNEMADHDRRREAMRMKMQRSRNMEEYRLLEVIREGDLEGFVDEFCETNLICVAKAA