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Clc02G22710 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G22710
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionauxin-responsive protein SAUR50-like
Genome locationClcChr02:34778825..34779795
RNA-Seq ExpressionClc02G22710
SyntenyClc02G22710
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646889.1 hypothetical protein Csa_020692 [Cucumis sativus]7.2e-6091.04Show/hide
Query:  MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRFDSGQDECDHEVGDDE-STPVPEDVKEGYFAVVAVEAEKPKRFVVPLSCLTNPTFLRLLEAAAEEFG
        MAK VTIAKKKNGIVKLKTAVGKLQRSLSLGRR DSGQDECD+ VGDDE STPVPEDVKEG+FAVVAV+AE+PKRFVVPLSCLTNPTFLRLLEAAAEE+G
Subjt:  MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRFDSGQDECDHEVGDDE-STPVPEDVKEGYFAVVAVEAEKPKRFVVPLSCLTNPTFLRLLEAAAEEFG

Query:  FDHEGALTVPCQPSELERILAEQWVEGEEENGCI
        FDHEGALTVPC+PSELERILAE+WVE EEENGCI
Subjt:  FDHEGALTVPCQPSELERILAEQWVEGEEENGCI

XP_004145816.1 auxin-responsive protein SAUR50 [Cucumis sativus]3.8e-6191.11Show/hide
Query:  MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRFDSGQDECDHEVGDDE-STPVPEDVKEGYFAVVAVEAEKPKRFVVPLSCLTNPTFLRLLEAAAEEFG
        MAK VTIAKKKNGIVKLKTAVGKLQRSLSLGRR DSGQDECD+ VGDDE STPVPEDVKEG+FAVVAV+AE+PKRFVVPLSCLTNPTFLRLLEAAAEE+G
Subjt:  MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRFDSGQDECDHEVGDDE-STPVPEDVKEGYFAVVAVEAEKPKRFVVPLSCLTNPTFLRLLEAAAEEFG

Query:  FDHEGALTVPCQPSELERILAEQWVEGEEENGCIW
        FDHEGALTVPC+PSELERILAE+WVE EEENGCIW
Subjt:  FDHEGALTVPCQPSELERILAEQWVEGEEENGCIW

XP_008465358.1 PREDICTED: auxin-responsive protein SAUR32-like [Cucumis melo]1.4e-5889.05Show/hide
Query:  MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRFDSGQDECDHEVGDD-ESTPVPEDVKEGYFAVVAVEAEKPKRFVVPLSCLTNPTFLRLLEAAAEEFG
        MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRR DSGQDECD EVGDD  ST VPEDVKEG+FAVVAV+AE+PKRFVVPLSCLTNPTFLRLLEAAAEE+G
Subjt:  MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRFDSGQDECDHEVGDD-ESTPVPEDVKEGYFAVVAVEAEKPKRFVVPLSCLTNPTFLRLLEAAAEEFG

Query:  FDHEGALTVPCQPSELERILAEQWVEGE--EENGCIW
        F+HEGALTVPC+PSELERILAE+WVE E  EENGCIW
Subjt:  FDHEGALTVPCQPSELERILAEQWVEGE--EENGCIW

XP_022140427.1 auxin-responsive protein SAUR50-like [Momordica charantia]1.2e-5482.35Show/hide
Query:  MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRFDSGQDECDHEVGDDES-TPVPEDVKEGYFAVVAVEAEKPKRFVVPLSCLTNPTFLRLLEAAAEEFG
        MAKLVT AKKKNGIVKLKTAVGKLQRSLSLGRR ++  DE D+E GDD+S T VP D+KEG+FAVVAV+AE+PKRFV PLSCLTNPTFLRLLEAAAEE+G
Subjt:  MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRFDSGQDECDHEVGDDES-TPVPEDVKEGYFAVVAVEAEKPKRFVVPLSCLTNPTFLRLLEAAAEEFG

Query:  FDHEGALTVPCQPSELERILAEQWVEGEEENGCIWG
        FDHEGALTVPC+PSE+ERILAEQW E EEE+GCIWG
Subjt:  FDHEGALTVPCQPSELERILAEQWVEGEEENGCIWG

XP_038902788.1 auxin-responsive protein SAUR50-like [Benincasa hispida]9.7e-6593.33Show/hide
Query:  MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRFDSGQDECDHEVGDDESTPVPEDVKEGYFAVVAVEAEKPKRFVVPLSCLTNPTFLRLLEAAAEEFGF
        MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRR DSGQDECD+EVGDDESTPVPEDVKEG+FAVVAV+AE+PKRFVVPLSCLTNPTFLRLLEAAAEE+GF
Subjt:  MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRFDSGQDECDHEVGDDESTPVPEDVKEGYFAVVAVEAEKPKRFVVPLSCLTNPTFLRLLEAAAEEFGF

Query:  DHEGALTVPCQPSELERILAEQWVEGEEENGCIWG
        DHEGALTVPC+PSELERILAE+WVE EEENGCIWG
Subjt:  DHEGALTVPCQPSELERILAEQWVEGEEENGCIWG

TrEMBL top hitse value%identityAlignment
A0A0A0KGI2 Uncharacterized protein1.8e-6191.11Show/hide
Query:  MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRFDSGQDECDHEVGDDE-STPVPEDVKEGYFAVVAVEAEKPKRFVVPLSCLTNPTFLRLLEAAAEEFG
        MAK VTIAKKKNGIVKLKTAVGKLQRSLSLGRR DSGQDECD+ VGDDE STPVPEDVKEG+FAVVAV+AE+PKRFVVPLSCLTNPTFLRLLEAAAEE+G
Subjt:  MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRFDSGQDECDHEVGDDE-STPVPEDVKEGYFAVVAVEAEKPKRFVVPLSCLTNPTFLRLLEAAAEEFG

Query:  FDHEGALTVPCQPSELERILAEQWVEGEEENGCIW
        FDHEGALTVPC+PSELERILAE+WVE EEENGCIW
Subjt:  FDHEGALTVPCQPSELERILAEQWVEGEEENGCIW

A0A1S3CNL2 auxin-responsive protein SAUR32-like6.6e-5989.05Show/hide
Query:  MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRFDSGQDECDHEVGDD-ESTPVPEDVKEGYFAVVAVEAEKPKRFVVPLSCLTNPTFLRLLEAAAEEFG
        MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRR DSGQDECD EVGDD  ST VPEDVKEG+FAVVAV+AE+PKRFVVPLSCLTNPTFLRLLEAAAEE+G
Subjt:  MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRFDSGQDECDHEVGDD-ESTPVPEDVKEGYFAVVAVEAEKPKRFVVPLSCLTNPTFLRLLEAAAEEFG

Query:  FDHEGALTVPCQPSELERILAEQWVEGE--EENGCIW
        F+HEGALTVPC+PSELERILAE+WVE E  EENGCIW
Subjt:  FDHEGALTVPCQPSELERILAEQWVEGE--EENGCIW

A0A5D3DFC2 Auxin-responsive protein SAUR32-like6.6e-5989.05Show/hide
Query:  MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRFDSGQDECDHEVGDD-ESTPVPEDVKEGYFAVVAVEAEKPKRFVVPLSCLTNPTFLRLLEAAAEEFG
        MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRR DSGQDECD EVGDD  ST VPEDVKEG+FAVVAV+AE+PKRFVVPLSCLTNPTFLRLLEAAAEE+G
Subjt:  MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRFDSGQDECDHEVGDD-ESTPVPEDVKEGYFAVVAVEAEKPKRFVVPLSCLTNPTFLRLLEAAAEEFG

Query:  FDHEGALTVPCQPSELERILAEQWVEGE--EENGCIW
        F+HEGALTVPC+PSELERILAE+WVE E  EENGCIW
Subjt:  FDHEGALTVPCQPSELERILAEQWVEGE--EENGCIW

A0A6J1CGW5 auxin-responsive protein SAUR50-like5.7e-5582.35Show/hide
Query:  MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRFDSGQDECDHEVGDDES-TPVPEDVKEGYFAVVAVEAEKPKRFVVPLSCLTNPTFLRLLEAAAEEFG
        MAKLVT AKKKNGIVKLKTAVGKLQRSLSLGRR ++  DE D+E GDD+S T VP D+KEG+FAVVAV+AE+PKRFV PLSCLTNPTFLRLLEAAAEE+G
Subjt:  MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRFDSGQDECDHEVGDDES-TPVPEDVKEGYFAVVAVEAEKPKRFVVPLSCLTNPTFLRLLEAAAEEFG

Query:  FDHEGALTVPCQPSELERILAEQWVEGEEENGCIWG
        FDHEGALTVPC+PSE+ERILAEQW E EEE+GCIWG
Subjt:  FDHEGALTVPCQPSELERILAEQWVEGEEENGCIWG

A0A6J1H360 auxin-responsive protein SAUR50-like8.6e-5183.87Show/hide
Query:  KKNGIVKLKTAVGKLQRSLSLGRRFDSGQDECDHEVGDDESTPVPEDVKEGYFAVVAVEAEKPKRFVVPLSCLTNPTFLRLLEAAAEEFGFDHEGALTVP
        KKNGIVKLKTAVG+LQRSLSLGRR +SG  E DHE+GDD+STPVPEDVKEG+FAVVAV+AE+PKRFVVPLSCL NPTFLRLLEAAAEE+GFDHEGALT+P
Subjt:  KKNGIVKLKTAVGKLQRSLSLGRRFDSGQDECDHEVGDDESTPVPEDVKEGYFAVVAVEAEKPKRFVVPLSCLTNPTFLRLLEAAAEEFGFDHEGALTVP

Query:  CQPSELERILAEQWVEGEE-ENGC
        C+PSELERILAE+W E EE EN C
Subjt:  CQPSELERILAEQWVEGEE-ENGC

SwissProt top hitse value%identityAlignment
O65695 Auxin-responsive protein SAUR502.4e-1037.74Show/hide
Query:  VTIAKKKNGIVKLKTAVGKLQRSLSLGRRFDSGQDECDHEVGDDESTPVPEDVKEGYFAVVAVEAEKPKRFVVPLSCLTNPTFLRLLEAAAEEFGFDHEG
        + I KK + + +       L+R  SLG++   G DE            +P DV +G+F V     E   R++VP+S LT+P F  LL+ A EEFGFDH+ 
Subjt:  VTIAKKKNGIVKLKTAVGKLQRSLSLGRRFDSGQDECDHEVGDDESTPVPEDVKEGYFAVVAVEAEKPKRFVVPLSCLTNPTFLRLLEAAAEEFGFDHEG

Query:  ALTVPC
         LT+PC
Subjt:  ALTVPC

P0DKL1 Auxin-responsive protein SAUR509.3e-1038.89Show/hide
Query:  ECDHEVGDDESTPVPEDVKEGYFAVVAVEAEKPKRFVVPLSCLTNPTFLRLLEAAAEEFGFDHEGALTVPCQ
        +C     +++ + +P DV +G+F V     E+  R++VP+SCL +PTF  LL+ + EEFGF+H+  + +PCQ
Subjt:  ECDHEVGDDESTPVPEDVKEGYFAVVAVEAEKPKRFVVPLSCLTNPTFLRLLEAAAEEFGFDHEGALTVPCQ

P33079 Auxin-induced protein 10A51.7e-0845.45Show/hide
Query:  DVKEGYFAVVAVEAEKPKRFVVPLSCLTNPTFLRLLEAAAEEFGFDHE-GALTVPCQPSELERILA
        DV +GY AV     +K +RF +P+S L  P+F  LL  A EEFG+DH  G LT+PC+  E   + A
Subjt:  DVKEGYFAVVAVEAEKPKRFVVPLSCLTNPTFLRLLEAAAEEFGFDHE-GALTVPCQPSELERILA

P33082 Auxin-induced protein X151.0e-0848.44Show/hide
Query:  DVKEGYFAVVAVEAEKPKRFVVPLSCLTNPTFLRLLEAAAEEFGFDHE-GALTVPCQPSELERI
        D  +GY AV     EK KRFV+P+S +  P+F  LL  A EEFG+DH  G LT+PC     +RI
Subjt:  DVKEGYFAVVAVEAEKPKRFVVPLSCLTNPTFLRLLEAAAEEFGFDHE-GALTVPCQPSELERI

P33083 Auxin-induced protein 6B3.9e-0846.88Show/hide
Query:  DVKEGYFAVVAVEAEKPKRFVVPLSCLTNPTFLRLLEAAAEEFGFDH-EGALTVPCQPSELERI
        DV++GY AV     EK +RFV+P+S L  P+F  LL  A EEFG+ H  G LT+PC     + I
Subjt:  DVKEGYFAVVAVEAEKPKRFVVPLSCLTNPTFLRLLEAAAEEFGFDH-EGALTVPCQPSELERI

Arabidopsis top hitse value%identityAlignment
AT1G19830.1 SAUR-like auxin-responsive protein family1.5e-1040.91Show/hide
Query:  LQRSLSLGRRFDSGQDECDHEVGDDESTPVPEDVKEGYFAVVAVEAEKPKRFVVPLSCLTNPTFLRLLEAAAEEFGFDHEGALTVPCQ
        L+R  SLG++  S  ++     GD     +P DV +G+F V         R+V+P+S LT P F  LL+ A EEFGFDH   LT+PC+
Subjt:  LQRSLSLGRRFDSGQDECDHEVGDDESTPVPEDVKEGYFAVVAVEAEKPKRFVVPLSCLTNPTFLRLLEAAAEEFGFDHEGALTVPCQ

AT2G28085.1 SAUR-like auxin-responsive protein family5.7e-2350Show/hide
Query:  KLVTI---AKKKNGIVKLKTAVGKLQRSLSLGRRFDSGQDECDHEVGDDESTPVPEDVKEGYFAVVAVEA--EKPKRFVVPLSCLTNPTFLRLLEAAAEE
        +++TI    KK  GIVKLK  V +L +     + F S +  C  E G D    VP+DVKEG+FAV+AV+   E  +RFVVPL  L +P F +LLE A EE
Subjt:  KLVTI---AKKKNGIVKLKTAVGKLQRSLSLGRRFDSGQDECDHEVGDDESTPVPEDVKEGYFAVVAVEA--EKPKRFVVPLSCLTNPTFLRLLEAAAEE

Query:  FGFDHEGALTVPCQPSELERILAEQW
        +GF H+GAL VPC+PS L  IL EQW
Subjt:  FGFDHEGALTVPCQPSELERILAEQW

AT3G09870.1 SAUR-like auxin-responsive protein family1.5e-1846.15Show/hide
Query:  KLKTAVGKLQRSLSLGRRFDSGQDECDHEVGDDESTPVPEDVKEGYFAVVAVEAEKPKRFVVPLSCLTNPTFLRLLEAAAEEFGFDHEGALTVPCQPSEL
        K K  + KLQ      R      + C+ E   + ++ +P DVKEG+ AV+AV+ E+ KRFV+ L  L  P FLRLLE A EEFGF   G LT+PCQP E+
Subjt:  KLKTAVGKLQRSLSLGRRFDSGQDECDHEVGDDESTPVPEDVKEGYFAVVAVEAEKPKRFVVPLSCLTNPTFLRLLEAAAEEFGFDHEGALTVPCQPSEL

Query:  ERIL
        ++IL
Subjt:  ERIL

AT4G34760.1 SAUR-like auxin-responsive protein family1.7e-1137.74Show/hide
Query:  VTIAKKKNGIVKLKTAVGKLQRSLSLGRRFDSGQDECDHEVGDDESTPVPEDVKEGYFAVVAVEAEKPKRFVVPLSCLTNPTFLRLLEAAAEEFGFDHEG
        + I KK + + +       L+R  SLG++   G DE            +P DV +G+F V     E   R++VP+S LT+P F  LL+ A EEFGFDH+ 
Subjt:  VTIAKKKNGIVKLKTAVGKLQRSLSLGRRFDSGQDECDHEVGDDESTPVPEDVKEGYFAVVAVEAEKPKRFVVPLSCLTNPTFLRLLEAAAEEFGFDHEG

Query:  ALTVPC
         LT+PC
Subjt:  ALTVPC

AT4G38860.1 SAUR-like auxin-responsive protein family8.6e-1143.82Show/hide
Query:  LQRSLSLGRRFDSGQDECDHEVGDDESTPVPEDVKEGYFAVVAVEAEKPKRFVVPLSCLTNPTFLRLLEAAAEEFGFDHE-GALTVPCQ
        L+R  SLG++      +C  E G      +P DV +G+F V     EK  R++VP+S LT+P FL LL+ A EEFGF H+ G LT+PC+
Subjt:  LQRSLSLGRRFDSGQDECDHEVGDDESTPVPEDVKEGYFAVVAVEAEKPKRFVVPLSCLTNPTFLRLLEAAAEEFGFDHE-GALTVPCQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTAAGCTTGTGACCATAGCCAAGAAGAAAAATGGCATTGTAAAGCTTAAGACTGCTGTTGGGAAGCTTCAAAGAAGCCTCTCTTTAGGTCGGAGGTTCGATTCTGG
TCAAGATGAGTGTGACCACGAAGTCGGGGATGACGAATCAACTCCGGTACCCGAAGATGTCAAAGAAGGGTATTTTGCGGTCGTGGCCGTCGAAGCTGAGAAGCCAAAAC
GGTTTGTCGTTCCGTTGAGTTGCTTGACAAATCCAACGTTTTTGAGGCTTCTAGAGGCGGCGGCGGAGGAGTTCGGATTTGATCATGAAGGGGCATTGACGGTGCCATGT
CAGCCGAGCGAGCTCGAGCGAATCTTGGCGGAGCAATGGGTGGAAGGAGAGGAAGAAAATGGGTGCATTTGGGGAGAGTGA
mRNA sequenceShow/hide mRNA sequence
TCTTTTTTTCAATTATTTGACCACCCTTCAAACACCATATTATAAATCCATTGAACACCCACTTAACAAGGACCAAACTTTTTGTAGAATTATTCCACACATTGCCATTA
TTTTCTCTGATGGCTAAGCTTGTGACCATAGCCAAGAAGAAAAATGGCATTGTAAAGCTTAAGACTGCTGTTGGGAAGCTTCAAAGAAGCCTCTCTTTAGGTCGGAGGTT
CGATTCTGGTCAAGATGAGTGTGACCACGAAGTCGGGGATGACGAATCAACTCCGGTACCCGAAGATGTCAAAGAAGGGTATTTTGCGGTCGTGGCCGTCGAAGCTGAGA
AGCCAAAACGGTTTGTCGTTCCGTTGAGTTGCTTGACAAATCCAACGTTTTTGAGGCTTCTAGAGGCGGCGGCGGAGGAGTTCGGATTTGATCATGAAGGGGCATTGACG
GTGCCATGTCAGCCGAGCGAGCTCGAGCGAATCTTGGCGGAGCAATGGGTGGAAGGAGAGGAAGAAAATGGGTGCATTTGGGGAGAGTGATTGGAGAAACCATAAAACCG
TGGGGTTTTTGAAGCTATTGAAATGACCCAATACGATATCAAGAGGTTATTTTTTTCGTGACTTCAAATCCTCATGGCTTTGTAAAACTTTTTACCAAATGAAAAATTTG
GTATTTTGAGAATGGCTAATCAAAGTTGATGATGGCCATTTCATAACATGTTCATTATTCTCAGTTGCGCTGTGTTTAATTTAGTGTGATTTTACCCTCAAGTGTAAGTT
TTTTCAAAATGGTGTATCTTGTTTTCTACTTTATGTTGTTTTCTTGTGTTTCTTCTCTTCTTTTAACTCCCCTTAAATTGTGTGGAAAAAGTATTGTATTTTCTGATTTT
TGATATTACCATAAAAATTATATACTATAAGTGAAAGAAAGAGTAATTGGTACTATACTTCTCGTAATGTCGTTTCAAATCTCGTTTTGCC
Protein sequenceShow/hide protein sequence
MAKLVTIAKKKNGIVKLKTAVGKLQRSLSLGRRFDSGQDECDHEVGDDESTPVPEDVKEGYFAVVAVEAEKPKRFVVPLSCLTNPTFLRLLEAAAEEFGFDHEGALTVPC
QPSELERILAEQWVEGEEENGCIWGE