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Clc02G23210 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G23210
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptioncytochrome-c oxidases;electron carriers
Genome locationClcChr02:35242426..35246607
RNA-Seq ExpressionClc02G23210
SyntenyClc02G23210
Gene Ontology termsGO:0005743 - mitochondrial inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR039296 - Predicted cytochrome c oxidase subunit VII
IPR039297 - Cytochrome c oxidase subunit VII


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ABK23369.1 unknown [Picea sitchensis]8.4e-3044.77Show/hide
Query:  EQPFRPREKLIEKQKYFQSIHKHTYLKGPMDKVTSVAIPIALAASSLYLIKKSSYIVRPHQRQPSEQRFYPLLKPAISQLYQFSSRKQFIMLFKFNVGNF
        E PF PR+ +  KQ+Y+Q+I KHTYLKGP DK+TSV IPI LA ++L +I                                                 F
Subjt:  EQPFRPREKLIEKQKYFQSIHKHTYLKGPMDKVTSVAIPIALAASSLYLIKKSSYIVRPHQRQPSEQRFYPLLKPAISQLYQFSSRKQFIMLFKFNVGNF

Query:  PKMSEVTEQPFRPREKLIEKQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE
            ++TE PF PR+ +  KQ+Y+Q+I KHTYLKGP DK+TSV IPI LA ++L +IGRGIYNMSHGIGKKE
Subjt:  PKMSEVTEQPFRPREKLIEKQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE

EAY98293.1 hypothetical protein OsI_20202 [Oryza sativa Indica Group]4.9e-3052.23Show/hide
Query:  EQPFRPREKLIEKQKYFQSIHKHTYLKGPMDKVTSVAIPIALAASSLYLIKKSSYIVRPHQRQPSEQRFYPLLKPAISQLYQFSSRKQFIMLFKFNVGNF
        E PFRPREKL+EKQ+YFQS+HK TYLKG  D + SVAIP+ALAASS++L+         H+ +P E R   L KP IS +                  + 
Subjt:  EQPFRPREKLIEKQKYFQSIHKHTYLKGPMDKVTSVAIPIALAASSLYLIKKSSYIVRPHQRQPSEQRFYPLLKPAISQLYQFSSRKQFIMLFKFNVGNF

Query:  PKMSEVTEQPFRPREKLIEKQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLI
           S   E PFRPREKL+EKQ+YFQS+HK TYLKG  D + SVAIP+ALAASS++L+
Subjt:  PKMSEVTEQPFRPREKLIEKQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLI

GAV62871.1 COX7a domain-containing protein [Cephalotus follicularis]8.7e-4359.89Show/hide
Query:  MTEV-EQPFRPREKLIEKQKYFQSIHKHTYLKGPMDKVTSVAIPIALAASSLYLIKKSSYIVRPHQRQPSEQRFYPLLKPAISQLYQFSSRKQFIMLFKF
        MTE+ EQPFRPREKL+EKQKYFQ I K TYLKGP DK+TSVAIPIALAASSL+LI                                             
Subjt:  MTEV-EQPFRPREKLIEKQKYFQSIHKHTYLKGPMDKVTSVAIPIALAASSLYLIKKSSYIVRPHQRQPSEQRFYPLLKPAISQLYQFSSRKQFIMLFKF

Query:  NVGNFPKMSEVTEQPFRPREKLIEKQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE
              +M+E+TEQPFRPREKL+EKQKYFQ I K TYLKGP DK+TSVAIPIALAASSL+LIGRGIYNMSH IGKKE
Subjt:  NVGNFPKMSEVTEQPFRPREKLIEKQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE

KAE8646907.1 hypothetical protein Csa_021033 [Cucumis sativus]7.3e-5061.39Show/hide
Query:  MTEVEQPFRPREKLIEKQKYFQSIHKHTYLKGPMDKVTSVAIPIALAASSLYLI----KKSSYIVRPHQRQPSEQRF----------------YPLL--K
        M EVEQPFRPREKL+EKQK FQSIHKHTYLKGPMDK+TSVAIPIALAASSLYLI      ++ +   H     ++ F                Y +L   
Subjt:  MTEVEQPFRPREKLIEKQKYFQSIHKHTYLKGPMDKVTSVAIPIALAASSLYLI----KKSSYIVRPHQRQPSEQRF----------------YPLL--K

Query:  PAISQLYQFSSRKQFIMLFKFNVGNFPK----MSEVTEQPFRPREKLIEKQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGK
        P I++          +  F   V   P+    M+E  EQPFRPREKLIE+QK FQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGK
Subjt:  PAISQLYQFSSRKQFIMLFKFNVGNFPK----MSEVTEQPFRPREKLIEKQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGK

Query:  KE
        KE
Subjt:  KE

XP_038900908.1 uncharacterized protein LOC120087955 [Benincasa hispida]2.5e-2997.14Show/hide
Query:  MSEVTEQPFRPREKLIEKQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE
        M+EVTEQPFRPREKLIE+QKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE
Subjt:  MSEVTEQPFRPREKLIEKQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE

TrEMBL top hitse value%identityAlignment
A0A1Q3B4B9 COX7a domain-containing protein4.2e-4359.89Show/hide
Query:  MTEV-EQPFRPREKLIEKQKYFQSIHKHTYLKGPMDKVTSVAIPIALAASSLYLIKKSSYIVRPHQRQPSEQRFYPLLKPAISQLYQFSSRKQFIMLFKF
        MTE+ EQPFRPREKL+EKQKYFQ I K TYLKGP DK+TSVAIPIALAASSL+LI                                             
Subjt:  MTEV-EQPFRPREKLIEKQKYFQSIHKHTYLKGPMDKVTSVAIPIALAASSLYLIKKSSYIVRPHQRQPSEQRFYPLLKPAISQLYQFSSRKQFIMLFKF

Query:  NVGNFPKMSEVTEQPFRPREKLIEKQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE
              +M+E+TEQPFRPREKL+EKQKYFQ I K TYLKGP DK+TSVAIPIALAASSL+LIGRGIYNMSH IGKKE
Subjt:  NVGNFPKMSEVTEQPFRPREKLIEKQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE

A0A5A7SQB1 Histidine-containing phosphotransfer protein 11.7e-2894.29Show/hide
Query:  MSEVTEQPFRPREKLIEKQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE
        M+E  EQPFRPREKLIE+QKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE
Subjt:  MSEVTEQPFRPREKLIEKQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE

A0A6J1K8A8 uncharacterized protein LOC111491558 isoform X16.5e-2892.65Show/hide
Query:  EVTEQPFRPREKLIEKQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE
        ++TEQPFRPREKLIE+QKYFQSIHKHTYLKGP+DK+TSVAIPIALAASSLYLIGRGIYNMSHGIGKKE
Subjt:  EVTEQPFRPREKLIEKQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE

A2Y5D3 Uncharacterized protein2.4e-3052.23Show/hide
Query:  EQPFRPREKLIEKQKYFQSIHKHTYLKGPMDKVTSVAIPIALAASSLYLIKKSSYIVRPHQRQPSEQRFYPLLKPAISQLYQFSSRKQFIMLFKFNVGNF
        E PFRPREKL+EKQ+YFQS+HK TYLKG  D + SVAIP+ALAASS++L+         H+ +P E R   L KP IS +                  + 
Subjt:  EQPFRPREKLIEKQKYFQSIHKHTYLKGPMDKVTSVAIPIALAASSLYLIKKSSYIVRPHQRQPSEQRFYPLLKPAISQLYQFSSRKQFIMLFKFNVGNF

Query:  PKMSEVTEQPFRPREKLIEKQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLI
           S   E PFRPREKL+EKQ+YFQS+HK TYLKG  D + SVAIP+ALAASS++L+
Subjt:  PKMSEVTEQPFRPREKLIEKQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLI

A9NRV8 Uncharacterized protein4.1e-3044.77Show/hide
Query:  EQPFRPREKLIEKQKYFQSIHKHTYLKGPMDKVTSVAIPIALAASSLYLIKKSSYIVRPHQRQPSEQRFYPLLKPAISQLYQFSSRKQFIMLFKFNVGNF
        E PF PR+ +  KQ+Y+Q+I KHTYLKGP DK+TSV IPI LA ++L +I                                                 F
Subjt:  EQPFRPREKLIEKQKYFQSIHKHTYLKGPMDKVTSVAIPIALAASSLYLIKKSSYIVRPHQRQPSEQRFYPLLKPAISQLYQFSSRKQFIMLFKFNVGNF

Query:  PKMSEVTEQPFRPREKLIEKQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE
            ++TE PF PR+ +  KQ+Y+Q+I KHTYLKGP DK+TSV IPI LA ++L +IGRGIYNMSHGIGKKE
Subjt:  PKMSEVTEQPFRPREKLIEKQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G21105.1 cytochrome-c oxidases;electron carriers1.6e-2682.09Show/hide
Query:  VTEQPFRPREKLIEKQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE
        +TE PFRPREKL+EKQ+ FQSI +HTYLKGP+DK+TSVAIPIALAASSLY+IG GIYNMS+GIGKKE
Subjt:  VTEQPFRPREKLIEKQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE

AT4G21105.2 cytochrome-c oxidases;electron carriers2.9e-1273.17Show/hide
Query:  VTEQPFRPREKLIEKQKYFQSIHKHTYLKGPLDKVTSVAIP
        +TE PFRPREKL+EKQ+ FQSI +HTYLKGP+DK+TS+ IP
Subjt:  VTEQPFRPREKLIEKQKYFQSIHKHTYLKGPLDKVTSVAIP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTGCTAGCTTGTTATCAATTTGCCGTGTTTATGAGCCTTTATCATTGATGACAGAAGTAGAACAACCTTTTAGACCCCGCGAGAAACTTATTGAGAAGCAAAAATA
TTTCCAGAGCATCCACAAGCACACTTATCTTAAAGGGCCAATGGACAAAGTCACCTCCGTTGCCATTCCAATTGCTCTTGCAGCTTCATCACTGTATCTTATCAAGAAAT
CATCGTATATCGTTCGCCCCCATCAGCGGCAGCCTTCGGAACAACGATTTTATCCTCTCCTGAAACCTGCAATTTCACAGCTGTATCAGTTTTCTAGCCGTAAGCAATTT
ATCATGCTTTTTAAATTTAATGTTGGAAACTTTCCAAAGATGAGTGAAGTAACTGAACAACCATTTAGGCCTCGTGAAAAACTTATTGAGAAGCAAAAGTATTTTCAGAG
CATCCACAAGCATACATATCTTAAAGGGCCATTGGATAAGGTCACCTCTGTTGCCATTCCAATTGCTTTGGCAGCTTCGTCATTGTATCTTATAGGACGGGGGATTTATA
ACATGTCACATGGCATCGGGAAGAAAGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGATTGCTAGCTTGTTATCAATTTGCCGTGTTTATGAGCCTTTATCATTGATGACAGAAGTAGAACAACCTTTTAGACCCCGCGAGAAACTTATTGAGAAGCAAAAATA
TTTCCAGAGCATCCACAAGCACACTTATCTTAAAGGGCCAATGGACAAAGTCACCTCCGTTGCCATTCCAATTGCTCTTGCAGCTTCATCACTGTATCTTATCAAGAAAT
CATCGTATATCGTTCGCCCCCATCAGCGGCAGCCTTCGGAACAACGATTTTATCCTCTCCTGAAACCTGCAATTTCACAGCTGTATCAGTTTTCTAGCCGTAAGCAATTT
ATCATGCTTTTTAAATTTAATGTTGGAAACTTTCCAAAGATGAGTGAAGTAACTGAACAACCATTTAGGCCTCGTGAAAAACTTATTGAGAAGCAAAAGTATTTTCAGAG
CATCCACAAGCATACATATCTTAAAGGGCCATTGGATAAGGTCACCTCTGTTGCCATTCCAATTGCTTTGGCAGCTTCGTCATTGTATCTTATAGGACGGGGGATTTATA
ACATGTCACATGGCATCGGGAAGAAAGAATGAGGTCACAGTCTATGAATCTTAATTTCAAAGAGTTTTTATGCTCTGGACCCATGTTAATTTTGTTATCGAAGTAATCTT
TGTCTAATAATTGCTTAAGTTGCAGACTCGCCTACCAATTGATTTGAACATCATTCTCAGATTCATTGTTATTGCGTATTGGAATGGTTTGTCTCAGATTATTGTTTTTC
TCCTTTTTGAGAAATTGTCTGGTTGAGTTTGATTTCCTATGATGTGATTCTTAAAGTTGTGCGGTTAGACTATGTGTTTGGAGATTCTGGAAGCCCAATGGTGGCGCAAG
TAAAGAAGTGAGCAACATATCTAGAATAGTTGTTTCGTTTTTACTTTATATTGTATGG
Protein sequenceShow/hide protein sequence
MIASLLSICRVYEPLSLMTEVEQPFRPREKLIEKQKYFQSIHKHTYLKGPMDKVTSVAIPIALAASSLYLIKKSSYIVRPHQRQPSEQRFYPLLKPAISQLYQFSSRKQF
IMLFKFNVGNFPKMSEVTEQPFRPREKLIEKQKYFQSIHKHTYLKGPLDKVTSVAIPIALAASSLYLIGRGIYNMSHGIGKKE