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Clc02G23925 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G23925
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionCyclin family protein
Genome locationClcChr02:35852136..35853005
RNA-Seq ExpressionClc02G23925
SyntenyClc02G23925
Gene Ontology termsGO:0000079 - regulation of cyclin-dependent protein serine/threonine kinase activity (biological process)
GO:0006534 - cysteine metabolic process (biological process)
GO:0044772 - mitotic cell cycle phase transition (biological process)
GO:0051301 - cell division (biological process)
GO:0000307 - cyclin-dependent protein kinase holoenzyme complex (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0016538 - cyclin-dependent protein serine/threonine kinase regulator activity (molecular function)
GO:0030170 - pyridoxal phosphate binding (molecular function)
GO:0031071 - cysteine desulfurase activity (molecular function)
InterPro domainsIPR006671 - Cyclin, N-terminal
IPR013763 - Cyclin-like
IPR036915 - Cyclin-like superfamily
IPR039361 - Cyclin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061747.1 cysteine desulfurase 1 [Cucumis melo var. makuwa]4.4e-1787.5Show/hide
Query:  ESKVADYMGAQPNLNAKMRSILIDWLIEVHHKFELMLETLYLPVNIVERFLSLKTV
        ESKV+DYMG QP+LNAKMRSILIDWLIEVH KFELM ETLYL VNIV+RFLSLKTV
Subjt:  ESKVADYMGAQPNLNAKMRSILIDWLIEVHHKFELMLETLYLPVNIVERFLSLKTV

XP_022152988.1 G2/mitotic-specific cyclin S13-7 [Momordica charantia]4.4e-1782.46Show/hide
Query:  DESKVADYMGAQPNLNAKMRSILIDWLIEVHHKFELMLETLYLPVNIVERFLSLKTV
        DES+V+DYMG+QP+LNAKMRSIL+DWLIEVH KF+LM ETLYL VNIV+RFLSLKTV
Subjt:  DESKVADYMGAQPNLNAKMRSILIDWLIEVHHKFELMLETLYLPVNIVERFLSLKTV

XP_038900953.1 G2/mitotic-specific cyclin S13-7 isoform X1 [Benincasa hispida]1.5e-1787.72Show/hide
Query:  DESKVADYMGAQPNLNAKMRSILIDWLIEVHHKFELMLETLYLPVNIVERFLSLKTV
        DE KV+DYMGAQP+LNAKMRSILIDWLIEVH KFELM ETLYL VNIV+RFLSLKTV
Subjt:  DESKVADYMGAQPNLNAKMRSILIDWLIEVHHKFELMLETLYLPVNIVERFLSLKTV

XP_038900954.1 G2/mitotic-specific cyclin S13-7 isoform X2 [Benincasa hispida]1.5e-1787.72Show/hide
Query:  DESKVADYMGAQPNLNAKMRSILIDWLIEVHHKFELMLETLYLPVNIVERFLSLKTV
        DE KV+DYMGAQP+LNAKMRSILIDWLIEVH KFELM ETLYL VNIV+RFLSLKTV
Subjt:  DESKVADYMGAQPNLNAKMRSILIDWLIEVHHKFELMLETLYLPVNIVERFLSLKTV

XP_038900955.1 G2/mitotic-specific cyclin S13-7 isoform X3 [Benincasa hispida]1.8e-1885.25Show/hide
Query:  SRSVDESKVADYMGAQPNLNAKMRSILIDWLIEVHHKFELMLETLYLPVNIVERFLSLKTV
        +RS DE KV+DYMGAQP+LNAKMRSILIDWLIEVH KFELM ETLYL VNIV+RFLSLKTV
Subjt:  SRSVDESKVADYMGAQPNLNAKMRSILIDWLIEVHHKFELMLETLYLPVNIVERFLSLKTV

TrEMBL top hitse value%identityAlignment
A0A5A7V4C2 B-like cyclin2.1e-1787.5Show/hide
Query:  ESKVADYMGAQPNLNAKMRSILIDWLIEVHHKFELMLETLYLPVNIVERFLSLKTV
        ESKV+DYMG QP+LNAKMRSILIDWLIEVH KFELM ETLYL VNIV+RFLSLKTV
Subjt:  ESKVADYMGAQPNLNAKMRSILIDWLIEVHHKFELMLETLYLPVNIVERFLSLKTV

A0A5D3BAD5 B-like cyclin2.1e-1787.5Show/hide
Query:  ESKVADYMGAQPNLNAKMRSILIDWLIEVHHKFELMLETLYLPVNIVERFLSLKTV
        ESKV+DYMG QP+LNAKMRSILIDWLIEVH KFELM ETLYL VNIV+RFLSLKTV
Subjt:  ESKVADYMGAQPNLNAKMRSILIDWLIEVHHKFELMLETLYLPVNIVERFLSLKTV

A0A6J1DGB9 B-like cyclin2.1e-1782.46Show/hide
Query:  DESKVADYMGAQPNLNAKMRSILIDWLIEVHHKFELMLETLYLPVNIVERFLSLKTV
        DES+V+DYMG+QP+LNAKMRSIL+DWLIEVH KF+LM ETLYL VNIV+RFLSLKTV
Subjt:  DESKVADYMGAQPNLNAKMRSILIDWLIEVHHKFELMLETLYLPVNIVERFLSLKTV

A0A7J6ECX7 B-like cyclin2.1e-1778.33Show/hide
Query:  RSVDESKVADYMGAQPNLNAKMRSILIDWLIEVHHKFELMLETLYLPVNIVERFLSLKTV
        +S DE+KV DYMG QP++NAKMRSILIDWLIEVHHKFELM ETLYL +NIV+RFLS+K V
Subjt:  RSVDESKVADYMGAQPNLNAKMRSILIDWLIEVHHKFELMLETLYLPVNIVERFLSLKTV

A0A7J6G660 B-like cyclin2.1e-1778.33Show/hide
Query:  RSVDESKVADYMGAQPNLNAKMRSILIDWLIEVHHKFELMLETLYLPVNIVERFLSLKTV
        +S DE+KV DYMG QP++NAKMRSILIDWLIEVHHKFELM ETLYL +NIV+RFLS+K V
Subjt:  RSVDESKVADYMGAQPNLNAKMRSILIDWLIEVHHKFELMLETLYLPVNIVERFLSLKTV

SwissProt top hitse value%identityAlignment
O48790 Cyclin-B1-41.9e-1551.22Show/hide
Query:  AITKISRLEVWEEEVTISRSV-DESKVADYMGAQPNLNAKMRSILIDWLIEVHHKFELMLETLYLPVNIVERFLSLKTVRNQ
        A  +++ +E  E+     R+V +E  + DY+G+QP +N KMRSILIDWL++VH KFELM ETLYL +N+V+RFLSL  V  +
Subjt:  AITKISRLEVWEEEVTISRSV-DESKVADYMGAQPNLNAKMRSILIDWLIEVHHKFELMLETLYLPVNIVERFLSLKTVRNQ

P25011 G2/mitotic-specific cyclin S13-63.2e-1563.16Show/hide
Query:  DESKVADYMGAQPNLNAKMRSILIDWLIEVHHKFELMLETLYLPVNIVERFLSLKTV
        +ES+  DY+G+QP +N +MR+IL+DWLI+VH KFEL LETLYL +NI++RFL++KTV
Subjt:  DESKVADYMGAQPNLNAKMRSILIDWLIEVHHKFELMLETLYLPVNIVERFLSLKTV

P25012 G2/mitotic-specific cyclin S13-7 (Fragment)4.7e-1461.4Show/hide
Query:  DESKVADYMGAQPNLNAKMRSILIDWLIEVHHKFELMLETLYLPVNIVERFLSLKTV
        +ES   DY+ +QP +N +MR+IL+DWLI+VH KFEL LETLYL +NI++RFL++KTV
Subjt:  DESKVADYMGAQPNLNAKMRSILIDWLIEVHHKFELMLETLYLPVNIVERFLSLKTV

P34800 G2/mitotic-specific cyclin-17.2e-1556.34Show/hide
Query:  LEVWEEEVTISRSVD-ESKVADYMGAQPNLNAKMRSILIDWLIEVHHKFELMLETLYLPVNIVERFLSLKT
        +E  E+     +SV+ ES+  DYMG+QP +N KMR+ILIDWL++VHHKFEL  ETLYL +NIV+R+L+ +T
Subjt:  LEVWEEEVTISRSVD-ESKVADYMGAQPNLNAKMRSILIDWLIEVHHKFELMLETLYLPVNIVERFLSLKT

Q39069 Cyclin-B1-32.8e-1455.13Show/hide
Query:  AITKISRLEVWEEEVTISRSVDESKVADYMGAQPNLNAKMRSILIDWLIEVHHKFELMLETLYLPVNIVERFLSLKTV
        A+  +  + ++ +EV     V+ESK   YM  QP ++ KMRSILIDWL+EVH KF+L  ETLYL VNI++RFLSLKTV
Subjt:  AITKISRLEVWEEEVTISRSVDESKVADYMGAQPNLNAKMRSILIDWLIEVHHKFELMLETLYLPVNIVERFLSLKTV

Arabidopsis top hitse value%identityAlignment
AT1G34460.1 CYCLIN B1;56.9e-1350.67Show/hide
Query:  ISRLEVWEEEVTISRSVD-ESKVADYMGAQPNLNAKMRSILIDWLIEVHHKFELMLETLYLPVNIVERFLSLKTV
        ++ +E  ++  +  + V+ ES+   YM  Q  +N KMR+ILIDWL+EVH KFEL LETLYL VNI++RFL +K V
Subjt:  ISRLEVWEEEVTISRSVD-ESKVADYMGAQPNLNAKMRSILIDWLIEVHHKFELMLETLYLPVNIVERFLSLKTV

AT2G26760.1 Cyclin B1;41.4e-1651.22Show/hide
Query:  AITKISRLEVWEEEVTISRSV-DESKVADYMGAQPNLNAKMRSILIDWLIEVHHKFELMLETLYLPVNIVERFLSLKTVRNQ
        A  +++ +E  E+     R+V +E  + DY+G+QP +N KMRSILIDWL++VH KFELM ETLYL +N+V+RFLSL  V  +
Subjt:  AITKISRLEVWEEEVTISRSV-DESKVADYMGAQPNLNAKMRSILIDWLIEVHHKFELMLETLYLPVNIVERFLSLKTVRNQ

AT3G11520.1 CYCLIN B1;32.0e-1555.13Show/hide
Query:  AITKISRLEVWEEEVTISRSVDESKVADYMGAQPNLNAKMRSILIDWLIEVHHKFELMLETLYLPVNIVERFLSLKTV
        A+  +  + ++ +EV     V+ESK   YM  QP ++ KMRSILIDWL+EVH KF+L  ETLYL VNI++RFLSLKTV
Subjt:  AITKISRLEVWEEEVTISRSVDESKVADYMGAQPNLNAKMRSILIDWLIEVHHKFELMLETLYLPVNIVERFLSLKTV

AT4G37490.1 CYCLIN B1;15.3e-1349.33Show/hide
Query:  ISRLEVWEEEVTISRSVD-ESKVADYMGAQPNLNAKMRSILIDWLIEVHHKFELMLETLYLPVNIVERFLSLKTV
        ++ +E  E+  +  +SV+ E +  DYM +QP++N KMR IL++WLI+VH +FEL  ET YL VNI++RFLS+K V
Subjt:  ISRLEVWEEEVTISRSVD-ESKVADYMGAQPNLNAKMRSILIDWLIEVHHKFELMLETLYLPVNIVERFLSLKTV

AT5G06150.1 Cyclin family protein8.2e-1466.07Show/hide
Query:  ESKVADYMGAQPNLNAKMRSILIDWLIEVHHKFELMLETLYLPVNIVERFLSLKTV
        ES+   YM  Q  +N KMR+ILIDWL+EVH KFEL LETLYL VNI++RFLS+K V
Subjt:  ESKVADYMGAQPNLNAKMRSILIDWLIEVHHKFELMLETLYLPVNIVERFLSLKTV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACAGTCACTTCTTGCCATCGCCATTACTAAGATCTCTAGACTTGAGGTTTGGGAGGAAGAAGTAACCATTTCTCGCTCGGTCGATGAGAGCAAAGTAGCAGATTA
CATGGGAGCACAGCCAAATTTGAATGCTAAGATGAGATCCATTCTCATAGATTGGTTGATAGAAGTTCATCATAAGTTTGAACTGATGCTGGAAACCCTTTACCTTCCTG
TAAACATCGTTGAACGATTCCTTTCCTTAAAGACGGTTAGGAACCAAGGTGGTATGAGCTACTTTTGTCTCACATCGGTTAGAATGGGATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAACAGTCACTTCTTGCCATCGCCATTACTAAGATCTCTAGACTTGAGGTTTGGGAGGAAGAAGTAACCATTTCTCGCTCGGTCGATGAGAGCAAAGTAGCAGATTA
CATGGGAGCACAGCCAAATTTGAATGCTAAGATGAGATCCATTCTCATAGATTGGTTGATAGAAGTTCATCATAAGTTTGAACTGATGCTGGAAACCCTTTACCTTCCTG
TAAACATCGTTGAACGATTCCTTTCCTTAAAGACGGTTAGGAACCAAGGTGGTATGAGCTACTTTTGTCTCACATCGGTTAGAATGGGATGACCAATGTGGTACTTAAAT
AACTTGGCTCTCTCACCTCAATAGCTAGCTTTTAAGGTGTGGTACTTCAAGGTGCTTAACTACCTAATAATGATATCAAAACTGGTTATCAACGTTCCAAAGAGGAGCAT
TAGCTGAAGGTTCGGACCAGGTGTTTTCCAAGTGATGTATCATCGGTCTAGCCACTAAGATGTTGGCTTTCCAAGGATGGAGTTTTGTCAGGAATCAAGGTAGTATGAGC
TATCTTTGTGTCCCACATCGGTTAGAATGGGATGACCAAAGTTTAACTCCAGTCCAAAAGTATGAAGATTTGTAGTGTAGTTGGGTTCTTTTTCCATTGTTTTGTGTTGG
AGATCATTTTTCTGTTAA
Protein sequenceShow/hide protein sequence
MKQSLLAIAITKISRLEVWEEEVTISRSVDESKVADYMGAQPNLNAKMRSILIDWLIEVHHKFELMLETLYLPVNIVERFLSLKTVRNQGGMSYFCLTSVRMG