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Clc02G24070 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G24070
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr02:35979416..35981858
RNA-Seq ExpressionClc02G24070
SyntenyClc02G24070
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570426.1 hypothetical protein SDJN03_29341, partial [Cucurbita argyrosperma subsp. sororia]3.2e-0954.02Show/hide
Query:  GDPQAIDPRYPPAPEVNSATPTRNRRRTYTIDDSLLLVYSSDLLQHTRPAALDVFLTLADFDDGARRRNILQHPNHE-LYIWNSSVD
        GDP A DPRY  AP VNSATPTRNRR TYTI+     V SS   Q                   ARRRNILQH  HE L+IWNSS D
Subjt:  GDPQAIDPRYPPAPEVNSATPTRNRRRTYTIDDSLLLVYSSDLLQHTRPAALDVFLTLADFDDGARRRNILQHPNHE-LYIWNSSVD
TrEMBL top hitse value%identityAlignment
A0A0A0KI89 Uncharacterized protein1.8e-1350.91Show/hide
Query:  RPPVILLQSGDPQAIDPRYPPAPEVNSATPTRNRRRTYTIDDSLLLVYSSDLLQHTRPAALDVFLT-LADFDDGARRRNILQHPNHELYIWNSSVDSFGL
        +PPV LLQ     +IDP YPP P V SATPT +R     +  +LL          +   A   + T L     GARRRNIL+H NHEL+I NSSVD+FGL
Subjt:  RPPVILLQSGDPQAIDPRYPPAPEVNSATPTRNRRRTYTIDDSLLLVYSSDLLQHTRPAALDVFLT-LADFDDGARRRNILQHPNHELYIWNSSVDSFGL

Query:  IEQDLTAKLG
        I+QDLTAKLG
Subjt:  IEQDLTAKLG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACAAACCCAACCTTAAGATTTTCATATACTTGAACTCAACTCAGACGAAACAGTATAGGCCGCCAGTCATTCTTCTTCAGTCCGGCGATCCTCAAGCAATAGACCC
ACGCTACCCTCCGGCGCCAGAAGTCAACAGCGCGACTCCGACCAGAAACCGGCGCCGCACTTACACCATTGACGACAGTTTGCTCCTCGTCTACAGCAGCGACTTGTTGC
AGCACACCAGACCCGCGGCGCTTGACGTCTTCTTAACCCTTGCAGACTTCGACGACGGCGCAAGACGGCGCAACATCCTCCAGCACCCAAACCACGAGCTCTACATTTGG
AATTCTTCTGTTGATAGTTTCGGACTAATCGAACAAGATTTAACGGCGAAATTGGGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGAACAAACCCAACCTTAAGATTTTCATATACTTGAACTCAACTCAGACGAAACAGTATAGGCCGCCAGTCATTCTTCTTCAGTCCGGCGATCCTCAAGCAATAGACCC
ACGCTACCCTCCGGCGCCAGAAGTCAACAGCGCGACTCCGACCAGAAACCGGCGCCGCACTTACACCATTGACGACAGTTTGCTCCTCGTCTACAGCAGCGACTTGTTGC
AGCACACCAGACCCGCGGCGCTTGACGTCTTCTTAACCCTTGCAGACTTCGACGACGGCGCAAGACGGCGCAACATCCTCCAGCACCCAAACCACGAGCTCTACATTTGG
AATTCTTCTGTTGATAGTTTCGGACTAATCGAACAAGATTTAACGGCGAAATTGGGGTAG
Protein sequenceShow/hide protein sequence
MNKPNLKIFIYLNSTQTKQYRPPVILLQSGDPQAIDPRYPPAPEVNSATPTRNRRRTYTIDDSLLLVYSSDLLQHTRPAALDVFLTLADFDDGARRRNILQHPNHELYIW
NSSVDSFGLIEQDLTAKLG