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Clc02G24380 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G24380
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionPhosphatidylinositol N-acetylglucosaminyltransferase subunit Y
Genome locationClcChr02:36226630..36228846
RNA-Seq ExpressionClc02G24380
SyntenyClc02G24380
Gene Ontology termsGO:0016117 - carotenoid biosynthetic process (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0009509 - chromoplast (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0016166 - phytoene dehydrogenase activity (molecular function)
InterPro domainsIPR029164 - Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN33919.1 hypothetical protein [Cucumis melo subsp. melo]6.5e-3084.09Show/hide
Query:  MSSIGSLVPR-EVVDRWQGFLFVVVSFFFLLLFLYAAIISKLLPPSNNAFLSAIQNDRYYCLLMPLTLPILYVAVYFHWLSMKLFKHA
        MSSI SL+PR E V R QGF FVV+SF  LL+FLYAA+ISKLLPPSNNAFLSAIQND YYCLL+PLTLPILYVAVYFHWLSMKLFKHA
Subjt:  MSSIGSLVPR-EVVDRWQGFLFVVVSFFFLLLFLYAAIISKLLPPSNNAFLSAIQNDRYYCLLMPLTLPILYVAVYFHWLSMKLFKHA

EYU17719.1 hypothetical protein MIMGU_mgv1a017254mg [Erythranthe guttata]6.7e-1962.35Show/hide
Query:  LVPREVVDR----WQGFLFVVVSFFFLLLFLYAAIISKLLPPSNNAFLSAIQNDRYYCLLMPLTLPILYVAVYFHWLSMKLFKHA
        L  RE VD     + G+ F++   F  + FLYAA++SKLLPPS+N+ + AIQND YYC L+PLTLPIL+VAVYFHWLSMKLFKHA
Subjt:  LVPREVVDR----WQGFLFVVVSFFFLLLFLYAAIISKLLPPSNNAFLSAIQNDRYYCLLMPLTLPILYVAVYFHWLSMKLFKHA

KAG6605922.1 hypothetical protein SDJN03_03239, partial [Cucurbita argyrosperma subsp. sororia]2.1e-2881.82Show/hide
Query:  MSSIGSLVPREVVD-RWQGFLFVVVSFFFLLLFLYAAIISKLLPPSNNAFLSAIQNDRYYCLLMPLTLPILYVAVYFHWLSMKLFKHA
        MSSI S V RE    RWQGF+F+VVSF FLLLFLYAAIISKLL PS+NAFLSAIQ D YYCLL+PLTLPILY AVYFHWLSMKLFKHA
Subjt:  MSSIGSLVPREVVD-RWQGFLFVVVSFFFLLLFLYAAIISKLLPPSNNAFLSAIQNDRYYCLLMPLTLPILYVAVYFHWLSMKLFKHA

KDO61195.1 hypothetical protein CISIN_1g040265mg [Citrus sinensis]8.8e-1975.71Show/hide
Query:  GFLFVVVSFFFLLLFLYAAIISKLLPPSNNAFLSAIQNDRYYCLLMPLTLPILYVAVYFHWLSMKLFKHA
        G+ F+V+   F L FL+AAIISKLLP SNN  LSAIQNDRYYC L+PLTLPI+ VAVYFHWLSMKLFKHA
Subjt:  GFLFVVVSFFFLLLFLYAAIISKLLPPSNNAFLSAIQNDRYYCLLMPLTLPILYVAVYFHWLSMKLFKHA

XP_040987410.1 uncharacterized protein LOC121235195 [Juglans microcarpa x Juglans regia]8.8e-1960.47Show/hide
Query:  SSIGSLVPREVVDRWQGFLFVVVSFFFLLLFLYAAIISKLLPPSNNAFLSAIQNDRYYCLLMPLTLPILYVAVYFHWLSMKLFKHA
        SS  S +     + + G+LFV + F F + FL+AA++SKLL  SNNA +SAIQND +YC L+PLTLP+L VAVYFHWLSMKLFKHA
Subjt:  SSIGSLVPREVVDRWQGFLFVVVSFFFLLLFLYAAIISKLLPPSNNAFLSAIQNDRYYCLLMPLTLPILYVAVYFHWLSMKLFKHA

TrEMBL top hitse value%identityAlignment
A0A022PQH2 Uncharacterized protein3.3e-1962.35Show/hide
Query:  LVPREVVDR----WQGFLFVVVSFFFLLLFLYAAIISKLLPPSNNAFLSAIQNDRYYCLLMPLTLPILYVAVYFHWLSMKLFKHA
        L  RE VD     + G+ F++   F  + FLYAA++SKLLPPS+N+ + AIQND YYC L+PLTLPIL+VAVYFHWLSMKLFKHA
Subjt:  LVPREVVDR----WQGFLFVVVSFFFLLLFLYAAIISKLLPPSNNAFLSAIQNDRYYCLLMPLTLPILYVAVYFHWLSMKLFKHA

A0A067F541 Uncharacterized protein4.2e-1975.71Show/hide
Query:  GFLFVVVSFFFLLLFLYAAIISKLLPPSNNAFLSAIQNDRYYCLLMPLTLPILYVAVYFHWLSMKLFKHA
        G+ F+V+   F L FL+AAIISKLLP SNN  LSAIQNDRYYC L+PLTLPI+ VAVYFHWLSMKLFKHA
Subjt:  GFLFVVVSFFFLLLFLYAAIISKLLPPSNNAFLSAIQNDRYYCLLMPLTLPILYVAVYFHWLSMKLFKHA

A0A0A0KIB0 Uncharacterized protein3.1e-3085.23Show/hide
Query:  MSSIGSLVPR-EVVDRWQGFLFVVVSFFFLLLFLYAAIISKLLPPSNNAFLSAIQNDRYYCLLMPLTLPILYVAVYFHWLSMKLFKHA
        MSSI SL+PR E V R QG LFVVVSF FLL+FLYAA ISKLLPPSNNAFLSAIQND +YCLL+PLTLPILYVAVYFHWLSMKLFKHA
Subjt:  MSSIGSLVPR-EVVDRWQGFLFVVVSFFFLLLFLYAAIISKLLPPSNNAFLSAIQNDRYYCLLMPLTLPILYVAVYFHWLSMKLFKHA

E5GBS7 Uncharacterized protein3.1e-3084.09Show/hide
Query:  MSSIGSLVPR-EVVDRWQGFLFVVVSFFFLLLFLYAAIISKLLPPSNNAFLSAIQNDRYYCLLMPLTLPILYVAVYFHWLSMKLFKHA
        MSSI SL+PR E V R QGF FVV+SF  LL+FLYAA+ISKLLPPSNNAFLSAIQND YYCLL+PLTLPILYVAVYFHWLSMKLFKHA
Subjt:  MSSIGSLVPR-EVVDRWQGFLFVVVSFFFLLLFLYAAIISKLLPPSNNAFLSAIQNDRYYCLLMPLTLPILYVAVYFHWLSMKLFKHA

F6GWB2 Uncharacterized protein9.5e-1971.43Show/hide
Query:  GFLFVVVSFFFLLLFLYAAIISKLLPPSNNAFLSAIQNDRYYCLLMPLTLPILYVAVYFHWLSMKLFKHA
        G++F++    F L FLYAA+ISKLLPPS N  +SAIQ DRYYC L+PLT+PIL VAVYFHWLSMKLFKHA
Subjt:  GFLFVVVSFFFLLLFLYAAIISKLLPPSNNAFLSAIQNDRYYCLLMPLTLPILYVAVYFHWLSMKLFKHA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCGATCGGATCGTTGGTTCCCAGAGAAGTAGTTGATCGATGGCAAGGATTTTTGTTCGTCGTCGTCAGCTTCTTTTTCCTTCTGTTATTTCTCTATGCCGCCAT
CATTTCCAAGCTTCTTCCACCTTCCAACAACGCCTTCTTATCTGCTATTCAGAATGACCGGTATTATTGTCTCCTGATGCCCTTGACATTGCCTATCCTTTACGTCGCGG
TTTATTTCCATTGGCTGAGCATGAAACTATTCAAGCATGCTTGA
mRNA sequenceShow/hide mRNA sequence
GATCCATCGTGTAAATTTGAAGAGATGAGTTCGATCGGATCGTTGGTTCCCAGAGAAGTAGTTGATCGATGGCAAGGATTTTTGTTCGTCGTCGTCAGCTTCTTTTTCCT
TCTGTTATTTCTCTATGCCGCCATCATTTCCAAGCTTCTTCCACCTTCCAACAACGCCTTCTTATCTGCTATTCAGAATGACCGGTATTATTGTCTCCTGATGCCCTTGA
CATTGCCTATCCTTTACGTCGCGGTTTATTTCCATTGGCTGAGCATGAAACTATTCAAGCATGCTTGATCATGTAGTCGTAAGAAAGACGAAGGTTTTGAACAAGGTTGA
GTGTCTAAATCTTTGATTGAATTACAATATGATGTGTTTGGAAGTTTCAATACCTAAGGCGATGAAGGATGTACGGTCGAATTACTGGAGACATACATGATGATCGTGCC
GAGGGACTTCCACATCGGCTGAGTATCTTGGACCGATTTTTGTAAAGGGTTGTTACCATAAAATATGCACCCATTGTGGTTGAACGATGAGGATATTAGGTATTCAAATT
AAACCGAAAGGCCAAACAGTGATTGAACACAAGCTCTATGAACTAATCTTGGCAAAAACAACTTGGCTTCTGGTTGTTTTTATATGGACAATCTCGAAATTTGATTTTGT
GACGAAAAAGTATCTACTCCAGAGCTACCTATTTACTTCGGATGGTCTACTTTTTTTAATTGAATGAAAAATGTTAGTTGATTTATT
Protein sequenceShow/hide protein sequence
MSSIGSLVPREVVDRWQGFLFVVVSFFFLLLFLYAAIISKLLPPSNNAFLSAIQNDRYYCLLMPLTLPILYVAVYFHWLSMKLFKHA