; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc02G24480 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G24480
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC110412324
Genome locationClcChr02:36303245..36304156
RNA-Seq ExpressionClc02G24480
SyntenyClc02G24480
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7035867.1 hypothetical protein SDJN02_02666 [Cucurbita argyrosperma subsp. argyrosperma]3.9e-3272.73Show/hide
Query:  MLSLQSLFNQNQRPPLIATKKCSDDVLRRRSFHPFHYSASRCCIVCARETDSQQFEVDPDKARQALQELDQQLQSFSKKQVTSPKKK-VQDMKLPRSQMR
        MLSL SLFNQN RPPL+ATKK S D L+ +  HP  + ASR CIVC++ETDSQQFEVDPDKARQALQELDQQLQSFSKK+ T PKKK V+  KLPR QMR
Subjt:  MLSLQSLFNQNQRPPLIATKKCSDDVLRRRSFHPFHYSASRCCIVCARETDSQQFEVDPDKARQALQELDQQLQSFSKKQVTSPKKK-VQDMKLPRSQMR

Query:  GEMTEISGPF
        GEM E+S  F
Subjt:  GEMTEISGPF

XP_008449706.1 PREDICTED: uncharacterized protein LOC103491505 [Cucumis melo]7.8e-4186.11Show/hide
Query:  MLSLQSLFNQNQRPPLIATKKCSDDVLRRRSFHPFHYSASRCCIVCARETDSQQFEVDPDKARQALQELDQQLQSFSKKQVTSPKKK-VQDMKLPRSQMR
        MLSLQS FNQNQRPP IATKKCSD VL+ R FHPFHYSAS   I+CARE+DSQQFEVDPDKARQALQELDQQLQSFSKKQV+SPKKK VQDM LPRSQMR
Subjt:  MLSLQSLFNQNQRPPLIATKKCSDDVLRRRSFHPFHYSASRCCIVCARETDSQQFEVDPDKARQALQELDQQLQSFSKKQVTSPKKK-VQDMKLPRSQMR

Query:  GEMTEISG
        GEMTEI G
Subjt:  GEMTEISG

XP_011657640.1 uncharacterized protein LOC101220685 [Cucumis sativus]2.1e-3882.24Show/hide
Query:  MLSLQSLFNQNQRPPLIATKKCSDDVLRRRSFHPFHYSASRCCIVCARETDSQQFEVDPDKARQALQELDQQLQSFSKKQVTSPKKK-VQDMKLPRSQMR
        MLSLQSLFNQN RPP + TKKCSD VL+ R FHP HYSAS   I+CA+E+DSQQFEVDPDKARQALQELDQQLQSFSKKQV+SPKKK VQDM +PRSQMR
Subjt:  MLSLQSLFNQNQRPPLIATKKCSDDVLRRRSFHPFHYSASRCCIVCARETDSQQFEVDPDKARQALQELDQQLQSFSKKQVTSPKKK-VQDMKLPRSQMR

Query:  GEMTEIS
        GEMTEIS
Subjt:  GEMTEIS

XP_022148727.1 uncharacterized protein LOC111017318 [Momordica charantia]1.1e-3478.38Show/hide
Query:  MLSLQSLFNQNQ----RPPLIATKKCSDDVLRRRSFHPFHYSASRCCIVCARETDSQQFEVDPDKARQALQELDQQLQSFSKKQVTSPKKKVQDMKLPRS
        MLSL SLFNQNQ     PPL ATKKC   VLRRR+ HPF  SA+R CIVCARE DSQQFE+DPDKARQALQELDQQLQSFSKKQVT PK K QDMKLPR+
Subjt:  MLSLQSLFNQNQ----RPPLIATKKCSDDVLRRRSFHPFHYSASRCCIVCARETDSQQFEVDPDKARQALQELDQQLQSFSKKQVTSPKKKVQDMKLPRS

Query:  QMRGEMTEISG
        Q+RGEM+EISG
Subjt:  QMRGEMTEISG

XP_038901592.1 uncharacterized protein LOC120088397 [Benincasa hispida]1.5e-4794.39Show/hide
Query:  MLSLQSLFNQNQRPPLIATKKCSDDVLRRRSFHPFHYSASRCCIVCARETDSQQFEVDPDKARQALQELDQQLQSFSKKQVTSPKKKVQDMKLPRSQMRG
        MLSLQSLFNQNQRPPLIATKKCSDDVLRRR+FHP HYSASR CI+CARETDSQQFEVDPDKARQALQELDQQL+SFSKKQVTSPKKKVQDMKLPRSQMRG
Subjt:  MLSLQSLFNQNQRPPLIATKKCSDDVLRRRSFHPFHYSASRCCIVCARETDSQQFEVDPDKARQALQELDQQLQSFSKKQVTSPKKKVQDMKLPRSQMRG

Query:  EMTEISG
        EMTEI+G
Subjt:  EMTEISG

TrEMBL top hitse value%identityAlignment
A0A0A0KH36 Uncharacterized protein1.0e-3882.24Show/hide
Query:  MLSLQSLFNQNQRPPLIATKKCSDDVLRRRSFHPFHYSASRCCIVCARETDSQQFEVDPDKARQALQELDQQLQSFSKKQVTSPKKK-VQDMKLPRSQMR
        MLSLQSLFNQN RPP + TKKCSD VL+ R FHP HYSAS   I+CA+E+DSQQFEVDPDKARQALQELDQQLQSFSKKQV+SPKKK VQDM +PRSQMR
Subjt:  MLSLQSLFNQNQRPPLIATKKCSDDVLRRRSFHPFHYSASRCCIVCARETDSQQFEVDPDKARQALQELDQQLQSFSKKQVTSPKKK-VQDMKLPRSQMR

Query:  GEMTEIS
        GEMTEIS
Subjt:  GEMTEIS

A0A1S3BNA1 uncharacterized protein LOC1034915053.8e-4186.11Show/hide
Query:  MLSLQSLFNQNQRPPLIATKKCSDDVLRRRSFHPFHYSASRCCIVCARETDSQQFEVDPDKARQALQELDQQLQSFSKKQVTSPKKK-VQDMKLPRSQMR
        MLSLQS FNQNQRPP IATKKCSD VL+ R FHPFHYSAS   I+CARE+DSQQFEVDPDKARQALQELDQQLQSFSKKQV+SPKKK VQDM LPRSQMR
Subjt:  MLSLQSLFNQNQRPPLIATKKCSDDVLRRRSFHPFHYSASRCCIVCARETDSQQFEVDPDKARQALQELDQQLQSFSKKQVTSPKKK-VQDMKLPRSQMR

Query:  GEMTEISG
        GEMTEI G
Subjt:  GEMTEISG

A0A5D3BB07 Uncharacterized protein3.8e-4186.11Show/hide
Query:  MLSLQSLFNQNQRPPLIATKKCSDDVLRRRSFHPFHYSASRCCIVCARETDSQQFEVDPDKARQALQELDQQLQSFSKKQVTSPKKK-VQDMKLPRSQMR
        MLSLQS FNQNQRPP IATKKCSD VL+ R FHPFHYSAS   I+CARE+DSQQFEVDPDKARQALQELDQQLQSFSKKQV+SPKKK VQDM LPRSQMR
Subjt:  MLSLQSLFNQNQRPPLIATKKCSDDVLRRRSFHPFHYSASRCCIVCARETDSQQFEVDPDKARQALQELDQQLQSFSKKQVTSPKKK-VQDMKLPRSQMR

Query:  GEMTEISG
        GEMTEI G
Subjt:  GEMTEISG

A0A6J1D5V3 uncharacterized protein LOC1110173185.3e-3578.38Show/hide
Query:  MLSLQSLFNQNQ----RPPLIATKKCSDDVLRRRSFHPFHYSASRCCIVCARETDSQQFEVDPDKARQALQELDQQLQSFSKKQVTSPKKKVQDMKLPRS
        MLSL SLFNQNQ     PPL ATKKC   VLRRR+ HPF  SA+R CIVCARE DSQQFE+DPDKARQALQELDQQLQSFSKKQVT PK K QDMKLPR+
Subjt:  MLSLQSLFNQNQ----RPPLIATKKCSDDVLRRRSFHPFHYSASRCCIVCARETDSQQFEVDPDKARQALQELDQQLQSFSKKQVTSPKKKVQDMKLPRS

Query:  QMRGEMTEISG
        Q+RGEM+EISG
Subjt:  QMRGEMTEISG

A0A6J1K5Q9 uncharacterized protein LOC1114914012.5e-3273.64Show/hide
Query:  MLSLQSLFNQNQRPPLIATKKCSDDVLRRRSFHPFHYSASRCCIVCARETDSQQFEVDPDKARQALQELDQQLQSFSKKQVTSPKKK-VQDMKLPRSQMR
        MLSL SL NQN RPPL+ATKK S DVL+ +  HPF   ASR CIVC++ETDSQQFEVDPDKARQALQELDQQLQSFSKK+ T PKKK V+  KLPR QMR
Subjt:  MLSLQSLFNQNQRPPLIATKKCSDDVLRRRSFHPFHYSASRCCIVCARETDSQQFEVDPDKARQALQELDQQLQSFSKKQVTSPKKK-VQDMKLPRSQMR

Query:  GEMTEISGPF
        GEM E+S  F
Subjt:  GEMTEISGPF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTTCCCTTCAGTCTCTCTTCAATCAAAACCAGCGGCCGCCATTGATAGCCACCAAGAAATGCTCTGATGATGTGTTGAGGAGGAGGAGTTTTCACCCATTTCATTA
TTCTGCTTCTCGTTGTTGCATTGTGTGTGCAAGGGAGACAGATTCTCAACAGTTTGAGGTTGACCCAGATAAGGCCAGGCAAGCCCTTCAAGAGCTTGATCAGCAGCTTC
AATCTTTCTCCAAGAAACAAGTCACTTCTCCCAAGAAGAAAGTTCAAGATATGAAACTTCCAAGAAGTCAAATGAGAGGAGAAATGACAGAGATTTCAGGGCCCTTTTAG
mRNA sequenceShow/hide mRNA sequence
TATTCGCTCAAACATACTTTTGCTGATATTTTATTCACACAGAATTGTTTTTAAAATTGCCTTATATTCTGACGCAGGAATGTTTCTGTTTACTTGTCTTATTAGATGTT
TATTTAATATGAAGGAATATTGTTATCCCAGGTGGCAGTGAGGACAGCCATATTCTGGATAAGAGTGCCAATACTGGTTGCCAAACACACTGCTCGCACAGTTATCAGCT
TCTTCTCTGTGATGACATAACATTATCTTGAAGGCATTTTCATGTGGCAGTGGTTAAATTAGCAGCTCCCAGATGCTTTCCCTTCAGTCTCTCTTCAATCAAAACCAGCG
GCCGCCATTGATAGCCACCAAGAAATGCTCTGATGATGTGTTGAGGAGGAGGAGTTTTCACCCATTTCATTATTCTGCTTCTCGTTGTTGCATTGTGTGTGCAAGGGAGA
CAGATTCTCAACAGTTTGAGGTTGACCCAGATAAGGCCAGGCAAGCCCTTCAAGAGCTTGATCAGCAGCTTCAATCTTTCTCCAAGAAACAAGTCACTTCTCCCAAGAAG
AAAGTTCAAGATATGAAACTTCCAAGAAGTCAAATGAGAGGAGAAATGACAGAGATTTCAGGGCCCTTTTAG
Protein sequenceShow/hide protein sequence
MLSLQSLFNQNQRPPLIATKKCSDDVLRRRSFHPFHYSASRCCIVCARETDSQQFEVDPDKARQALQELDQQLQSFSKKQVTSPKKKVQDMKLPRSQMRGEMTEISGPF