; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc02G25480 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G25480
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionExonuclease domain-containing protein
Genome locationClcChr02:37142584..37157473
RNA-Seq ExpressionClc02G25480
SyntenyClc02G25480
Gene Ontology termsGO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0005739 - mitochondrion (cellular component)
GO:0000175 - 3'-5'-exoribonuclease activity (molecular function)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004386 - helicase activity (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR013520 - Exonuclease, RNase T/DNA polymerase III
IPR022894 - Oligoribonuclease
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004142177.1 oligoribonuclease [Cucumis sativus]1.2e-12490.51Show/hide
Query:  MAMEPLVNAFSVLELDVEDDQIPSLSTSSKDDATASSPSRTGKSKKEVNISGDILAGERQKQGQPDIAAENYKFPLVWIDLEMTGLNVETDRILEIACII
        MAM+PLVNAFS+LELD EDDQIP+LSTSSKDDAT S PS TGK KKEVNISGDIL GERQKQGQP+  AE+YKFPLVWIDLEMTGLNVETDRILEIACII
Subjt:  MAMEPLVNAFSVLELDVEDDQIPSLSTSSKDDATASSPSRTGKSKKEVNISGDILAGERQKQGQPDIAAENYKFPLVWIDLEMTGLNVETDRILEIACII

Query:  TNGSLTKLVEGPDLVIHQSKECLEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLV
        TNG+LTKLVEGPDLVIHQSKECL+KMGEWCQSHHAASGLTKKVL+STISEREAEKQVI+FVKKHV + KLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLV
Subjt:  TNGSLTKLVEGPDLVIHQSKECLEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLV

Query:  DVSSVKALCFRWYPRDQKKAPPKENKHRAMDDIRESIMELKYYKENIFKNSKK
        DVSS+K LC RWYPRD+KKAPPKENKHRAMDDIRESIMELKYYKENIFKNSKK
Subjt:  DVSSVKALCFRWYPRDQKKAPPKENKHRAMDDIRESIMELKYYKENIFKNSKK

XP_022957669.1 oligoribonuclease [Cucurbita moschata]5.9e-12491.63Show/hide
Query:  MEPLVNAFSVLELDVEDDQIPSLSTSSKDDATASSPSRTGKSKKEVNISGDILAGERQKQGQPDIAAENYKFPLVWIDLEMTGLNVETDRILEIACIITN
        MEP VNAFSVLELD EDDQ+   ST SKD+A ASS SRTGKSKKEVNISGDIL G+RQKQ QPD AAE+YKFPLVWIDLEMTGLNVETDRILEIACIITN
Subjt:  MEPLVNAFSVLELDVEDDQIPSLSTSSKDDATASSPSRTGKSKKEVNISGDILAGERQKQGQPDIAAENYKFPLVWIDLEMTGLNVETDRILEIACIITN

Query:  GSLTKLVEGPDLVIHQSKECLEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLVDV
        GSLTKLVEGP LVIHQSKECLEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSY LHLAGNSVY+DFIFLKKYMPDLAGLFSHVLVDV
Subjt:  GSLTKLVEGPDLVIHQSKECLEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLVDV

Query:  SSVKALCFRWYPRDQKKAPPKENKHRAMDDIRESIMELKYYKENIFKNSKK
        SSVKALCFRW+PRDQKKAPPKENKHRAMDDIRESIMELKYYKENIFK  KK
Subjt:  SSVKALCFRWYPRDQKKAPPKENKHRAMDDIRESIMELKYYKENIFKNSKK

XP_022996309.1 oligoribonuclease [Cucurbita maxima]2.9e-12390.84Show/hide
Query:  MEPLVNAFSVLELDVEDDQIPSLSTSSKDDATASSPSRTGKSKKEVNISGDILAGERQKQGQPDIAAENYKFPLVWIDLEMTGLNVETDRILEIACIITN
        MEP VNAFSVLELD EDDQ+   ST SKD+  ASS SRTGKSKKEVNISGDIL GERQKQ QPD+AAE+YKFPLVWIDLEMTGLNVETDRILEIACIITN
Subjt:  MEPLVNAFSVLELDVEDDQIPSLSTSSKDDATASSPSRTGKSKKEVNISGDILAGERQKQGQPDIAAENYKFPLVWIDLEMTGLNVETDRILEIACIITN

Query:  GSLTKLVEGPDLVIHQSKECLEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLVDV
        GSLTKLVEGP LVIHQSKECLEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVI+FVKKHVGSY LHLAGNSVY+DF FLKKYMPDLAGLFSHVLVDV
Subjt:  GSLTKLVEGPDLVIHQSKECLEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLVDV

Query:  SSVKALCFRWYPRDQKKAPPKENKHRAMDDIRESIMELKYYKENIFKNSKK
        SSVKALCFRW+PRDQKKAPPKENKHRAMDDIRESIMELKYYKENIFK  KK
Subjt:  SSVKALCFRWYPRDQKKAPPKENKHRAMDDIRESIMELKYYKENIFKNSKK

XP_038902868.1 oligoribonuclease isoform X1 [Benincasa hispida]1.7e-13496.84Show/hide
Query:  MAMEPLVNAFSVLELDVEDDQIPSLSTSSKDDATASSPSRTGKSKKEVNISGDILAGERQKQGQPDIAAENYKFPLVWIDLEMTGLNVETDRILEIACII
        MAM+PLVNAFSVLELD EDDQIP+LSTSSKDDATASSPSRTGKSKKEVNISGDIL GE+QKQGQPD+AAENYKFPLVWIDLEMTGL+VETDRILEIACII
Subjt:  MAMEPLVNAFSVLELDVEDDQIPSLSTSSKDDATASSPSRTGKSKKEVNISGDILAGERQKQGQPDIAAENYKFPLVWIDLEMTGLNVETDRILEIACII

Query:  TNGSLTKLVEGPDLVIHQSKECLEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLV
        TNGSLTKLVEGPDLVIHQSKECLEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLV
Subjt:  TNGSLTKLVEGPDLVIHQSKECLEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLV

Query:  DVSSVKALCFRWYPRDQKKAPPKENKHRAMDDIRESIMELKYYKENIFKNSKK
        DVSSVKALCFRWYPRDQKKAPPKENKHRAMDDIRESIMELKYYK+NIFKNSKK
Subjt:  DVSSVKALCFRWYPRDQKKAPPKENKHRAMDDIRESIMELKYYKENIFKNSKK

XP_038902871.1 oligoribonuclease isoform X2 [Benincasa hispida]5.9e-12491.3Show/hide
Query:  MAMEPLVNAFSVLELDVEDDQIPSLSTSSKDDATASSPSRTGKSKKEVNISGDILAGERQKQGQPDIAAENYKFPLVWIDLEMTGLNVETDRILEIACII
        MAM+PLVNAFSVLELD EDDQIP+LSTSSKDDATASSPSRT               GE+QKQGQPD+AAENYKFPLVWIDLEMTGL+VETDRILEIACII
Subjt:  MAMEPLVNAFSVLELDVEDDQIPSLSTSSKDDATASSPSRTGKSKKEVNISGDILAGERQKQGQPDIAAENYKFPLVWIDLEMTGLNVETDRILEIACII

Query:  TNGSLTKLVEGPDLVIHQSKECLEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLV
        TNGSLTKLVEGPDLVIHQSKECLEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLV
Subjt:  TNGSLTKLVEGPDLVIHQSKECLEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLV

Query:  DVSSVKALCFRWYPRDQKKAPPKENKHRAMDDIRESIMELKYYKENIFKNSKK
        DVSSVKALCFRWYPRDQKKAPPKENKHRAMDDIRESIMELKYYK+NIFKNSKK
Subjt:  DVSSVKALCFRWYPRDQKKAPPKENKHRAMDDIRESIMELKYYKENIFKNSKK

TrEMBL top hitse value%identityAlignment
A0A0A0KZ28 Exonuclease domain-containing protein5.7e-12590.51Show/hide
Query:  MAMEPLVNAFSVLELDVEDDQIPSLSTSSKDDATASSPSRTGKSKKEVNISGDILAGERQKQGQPDIAAENYKFPLVWIDLEMTGLNVETDRILEIACII
        MAM+PLVNAFS+LELD EDDQIP+LSTSSKDDAT S PS TGK KKEVNISGDIL GERQKQGQP+  AE+YKFPLVWIDLEMTGLNVETDRILEIACII
Subjt:  MAMEPLVNAFSVLELDVEDDQIPSLSTSSKDDATASSPSRTGKSKKEVNISGDILAGERQKQGQPDIAAENYKFPLVWIDLEMTGLNVETDRILEIACII

Query:  TNGSLTKLVEGPDLVIHQSKECLEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLV
        TNG+LTKLVEGPDLVIHQSKECL+KMGEWCQSHHAASGLTKKVL+STISEREAEKQVI+FVKKHV + KLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLV
Subjt:  TNGSLTKLVEGPDLVIHQSKECLEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLV

Query:  DVSSVKALCFRWYPRDQKKAPPKENKHRAMDDIRESIMELKYYKENIFKNSKK
        DVSS+K LC RWYPRD+KKAPPKENKHRAMDDIRESIMELKYYKENIFKNSKK
Subjt:  DVSSVKALCFRWYPRDQKKAPPKENKHRAMDDIRESIMELKYYKENIFKNSKK

A0A1S3BNX4 oligoribonuclease1.8e-12390.91Show/hide
Query:  MAMEPLVNAFSVLELDVEDDQIPSLSTSSKDDATASSPSRTGKSKKEVNISGDILAGERQKQGQPDIAAENYKFPLVWIDLEMTGLNVETDRILEIACII
        MA +PLVNAFSVLELD EDDQIP+LSTSSKDDAT S  S TGKSKKEVNISGDI  GERQKQGQP+  AE+YKFPLVWIDLEMTGLNVETDRILEIACII
Subjt:  MAMEPLVNAFSVLELDVEDDQIPSLSTSSKDDATASSPSRTGKSKKEVNISGDILAGERQKQGQPDIAAENYKFPLVWIDLEMTGLNVETDRILEIACII

Query:  TNGSLTKLVEGPDLVIHQSKECLEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLV
        TNG+LTKLVEGPDLVIHQSKECLEKMGEWCQSHHAASGLTKKV +STISEREAEKQVIEFVKKHV   KLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLV
Subjt:  TNGSLTKLVEGPDLVIHQSKECLEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLV

Query:  DVSSVKALCFRWYPRDQKKAPPKENKHRAMDDIRESIMELKYYKENIFKNSKK
        DVSSVK LC RWYPRD+KKAPPKENKHRAMDDIRESIMELKYYKENIFKNSKK
Subjt:  DVSSVKALCFRWYPRDQKKAPPKENKHRAMDDIRESIMELKYYKENIFKNSKK

A0A6J1DKA2 oligoribonuclease isoform X13.4e-11787.65Show/hide
Query:  MEPLVNAFSVLELDVEDDQIPSLSTSSKDDATASSPSRTGKSKKEVNISGDILAGERQKQGQPDIAAENYKFPLVWIDLEMTGLNVETDRILEIACIITN
        M+ LVNAFSVLELD EDDQIP+LST SK DATASS S+TGKSKKEV+ISGDI  GERQKQ   D+AAE+YK PLVWIDLEMTGLNVETDRILEIACI+TN
Subjt:  MEPLVNAFSVLELDVEDDQIPSLSTSSKDDATASSPSRTGKSKKEVNISGDILAGERQKQGQPDIAAENYKFPLVWIDLEMTGLNVETDRILEIACIITN

Query:  GSLTKLVEGPDLVIHQSKECLEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLVDV
        G+LTKL EGPDLVIHQSKECLEKMGEWCQ+HHAASGLTKKVL+STISEREAEKQVIEFVKK+VGSY   LAGNSVY DFIFLKKYMPDLAGLFSHVLVDV
Subjt:  GSLTKLVEGPDLVIHQSKECLEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLVDV

Query:  SSVKALCFRWYPRDQKKAPPKENKHRAMDDIRESIMELKYYKENIFKNSKK
        SSVKALC RWYP+DQKKAP KENKHRAMDDIRESIMELKYYKENIFK SKK
Subjt:  SSVKALCFRWYPRDQKKAPPKENKHRAMDDIRESIMELKYYKENIFKNSKK

A0A6J1H2M6 oligoribonuclease2.9e-12491.63Show/hide
Query:  MEPLVNAFSVLELDVEDDQIPSLSTSSKDDATASSPSRTGKSKKEVNISGDILAGERQKQGQPDIAAENYKFPLVWIDLEMTGLNVETDRILEIACIITN
        MEP VNAFSVLELD EDDQ+   ST SKD+A ASS SRTGKSKKEVNISGDIL G+RQKQ QPD AAE+YKFPLVWIDLEMTGLNVETDRILEIACIITN
Subjt:  MEPLVNAFSVLELDVEDDQIPSLSTSSKDDATASSPSRTGKSKKEVNISGDILAGERQKQGQPDIAAENYKFPLVWIDLEMTGLNVETDRILEIACIITN

Query:  GSLTKLVEGPDLVIHQSKECLEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLVDV
        GSLTKLVEGP LVIHQSKECLEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSY LHLAGNSVY+DFIFLKKYMPDLAGLFSHVLVDV
Subjt:  GSLTKLVEGPDLVIHQSKECLEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLVDV

Query:  SSVKALCFRWYPRDQKKAPPKENKHRAMDDIRESIMELKYYKENIFKNSKK
        SSVKALCFRW+PRDQKKAPPKENKHRAMDDIRESIMELKYYKENIFK  KK
Subjt:  SSVKALCFRWYPRDQKKAPPKENKHRAMDDIRESIMELKYYKENIFKNSKK

A0A6J1K8C8 oligoribonuclease1.4e-12390.84Show/hide
Query:  MEPLVNAFSVLELDVEDDQIPSLSTSSKDDATASSPSRTGKSKKEVNISGDILAGERQKQGQPDIAAENYKFPLVWIDLEMTGLNVETDRILEIACIITN
        MEP VNAFSVLELD EDDQ+   ST SKD+  ASS SRTGKSKKEVNISGDIL GERQKQ QPD+AAE+YKFPLVWIDLEMTGLNVETDRILEIACIITN
Subjt:  MEPLVNAFSVLELDVEDDQIPSLSTSSKDDATASSPSRTGKSKKEVNISGDILAGERQKQGQPDIAAENYKFPLVWIDLEMTGLNVETDRILEIACIITN

Query:  GSLTKLVEGPDLVIHQSKECLEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLVDV
        GSLTKLVEGP LVIHQSKECLEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVI+FVKKHVGSY LHLAGNSVY+DF FLKKYMPDLAGLFSHVLVDV
Subjt:  GSLTKLVEGPDLVIHQSKECLEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLVDV

Query:  SSVKALCFRWYPRDQKKAPPKENKHRAMDDIRESIMELKYYKENIFKNSKK
        SSVKALCFRW+PRDQKKAPPKENKHRAMDDIRESIMELKYYKENIFK  KK
Subjt:  SSVKALCFRWYPRDQKKAPPKENKHRAMDDIRESIMELKYYKENIFKNSKK

SwissProt top hitse value%identityAlignment
A2VE52 Oligoribonuclease, mitochondrial3.9e-4646.46Show/hide
Query:  GDILAGERQKQGQPDIAAENYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPDLVIHQSKECLEKMGEWCQSHHAASGLTKKVLQSTISER
        G   A   ++ G    A E+    +VW+DLEMTGL++E D+I+E+AC+IT+  L  L EGP+L+I Q  E L+ M +WC+ HH  SGLTK V +ST++ +
Subjt:  GDILAGERQKQGQPDIAAENYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPDLVIHQSKECLEKMGEWCQSHHAASGLTKKVLQSTISER

Query:  EAEKQVIEFVKKHVGSYKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLVDVSSVKALCFRWYPRDQKKAPPKENKHRAMDDIRESIMELKYYKENIFK
        +AE + + FV++        LAGNSV+ D  FL KYMP       + ++DVS+VK LC RWYP + + AP K   HRA+DDI ESI EL++Y+ NIFK
Subjt:  EAEKQVIEFVKKHVGSYKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLVDVSSVKALCFRWYPRDQKKAPPKENKHRAMDDIRESIMELKYYKENIFK

Q5U1X1 Oligoribonuclease, mitochondrial3.9e-4648.9Show/hide
Query:  AAENYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPDLVIHQSKECLEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGS
        A E+    +VW+DLEMTGL++E D+I+E+AC+IT+  L  L EGP+L+I Q  E L+ M +WC+ HH  SGLTK V +ST++ ++AE + + FV++    
Subjt:  AAENYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPDLVIHQSKECLEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGS

Query:  YKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLVDVSSVKALCFRWYPRDQKKAPPKENKHRAMDDIRESIMELKYYKENIFK
            LAGNSV+ D  FL K+MP       + ++DVS+VK LC RWYP D + AP K   HRA+DDI ESI EL++Y+ NIFK
Subjt:  YKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLVDVSSVKALCFRWYPRDQKKAPPKENKHRAMDDIRESIMELKYYKENIFK

Q9D8S4 Oligoribonuclease, mitochondrial3.9e-4648.9Show/hide
Query:  AAENYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPDLVIHQSKECLEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGS
        A E+    +VW+DLEMTGL++E D+I+E+AC+IT+  L  L EGP+L+I Q  E L+ M +WC+ HH  SGLTK V +ST++ ++AE + + FV++    
Subjt:  AAENYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPDLVIHQSKECLEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGS

Query:  YKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLVDVSSVKALCFRWYPRDQKKAPPKENKHRAMDDIRESIMELKYYKENIFK
            LAGNSV+ D  FL K+MP       + ++DVS+VK LC RWYP D + AP K   HRA+DDI ESI EL++Y+ NIFK
Subjt:  YKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLVDVSSVKALCFRWYPRDQKKAPPKENKHRAMDDIRESIMELKYYKENIFK

Q9Y3B8 Oligoribonuclease, mitochondrial3.0e-4649.45Show/hide
Query:  AAENYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPDLVIHQSKECLEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGS
        A E+    +VW+DLEMTGL++E D+I+E+AC+IT+  L  L EGP+L+I Q  E L+ M +WC+ HH  SGLTK V +STI+ ++AE + + FV++    
Subjt:  AAENYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVEGPDLVIHQSKECLEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGS

Query:  YKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLVDVSSVKALCFRWYPRDQKKAPPKENKHRAMDDIRESIMELKYYKENIFK
            LAGNSV+ D  FL KYMP       + ++DVS+VK LC RWYP + + AP K   HRA+DDI ESI EL++Y+ NIFK
Subjt:  YKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLVDVSSVKALCFRWYPRDQKKAPPKENKHRAMDDIRESIMELKYYKENIFK

Q9ZVE0 Oligoribonuclease5.1e-7863.16Show/hide
Query:  MEPLVNAFSVLELDVEDDQIPSLSTSSKDDATASSPSRTGKSKKEVNISGDILAGERQKQGQPDIAAENYKFPLVWIDLEMTGLNVETDRILEIACIITN
        M  L NAFSVL               + +DA  +S S TGK ++ VN  G +  G+             YK PLVWIDLEMTGLNVE DRILEIACIITN
Subjt:  MEPLVNAFSVLELDVEDDQIPSLSTSSKDDATASSPSRTGKSKKEVNISGDILAGERQKQGQPDIAAENYKFPLVWIDLEMTGLNVETDRILEIACIITN

Query:  GSLTKLVEGPDLVIHQSKECLEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLVDV
        G LT+ VEGPDLV+ Q+K+CL+KM +WCQ+HH ASGLTKKVL S I+EREAE++VIEFVKKHVGS    LAGNSVY+DF+FLKKYMP+LA LF H+LVDV
Subjt:  GSLTKLVEGPDLVIHQSKECLEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLVDV

Query:  SSVKALCFRWYPRDQKKAPPKENKHRAMDDIRESIMELKYYKENIFK
        SSVKALC RW+P +++KAP K+N HRAMDDIRESI ELKYYK+ IFK
Subjt:  SSVKALCFRWYPRDQKKAPPKENKHRAMDDIRESIMELKYYKENIFK

Arabidopsis top hitse value%identityAlignment
AT2G26970.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.6e-7963.16Show/hide
Query:  MEPLVNAFSVLELDVEDDQIPSLSTSSKDDATASSPSRTGKSKKEVNISGDILAGERQKQGQPDIAAENYKFPLVWIDLEMTGLNVETDRILEIACIITN
        M  L NAFSVL               + +DA  +S S TGK ++ VN  G +  G+             YK PLVWIDLEMTGLNVE DRILEIACIITN
Subjt:  MEPLVNAFSVLELDVEDDQIPSLSTSSKDDATASSPSRTGKSKKEVNISGDILAGERQKQGQPDIAAENYKFPLVWIDLEMTGLNVETDRILEIACIITN

Query:  GSLTKLVEGPDLVIHQSKECLEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLVDV
        G LT+ VEGPDLV+ Q+K+CL+KM +WCQ+HH ASGLTKKVL S I+EREAE++VIEFVKKHVGS    LAGNSVY+DF+FLKKYMP+LA LF H+LVDV
Subjt:  GSLTKLVEGPDLVIHQSKECLEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLVDV

Query:  SSVKALCFRWYPRDQKKAPPKENKHRAMDDIRESIMELKYYKENIFK
        SSVKALC RW+P +++KAP K+N HRAMDDIRESI ELKYYK+ IFK
Subjt:  SSVKALCFRWYPRDQKKAPPKENKHRAMDDIRESIMELKYYKENIFK

AT2G26970.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.0e-7761.54Show/hide
Query:  MEPLVNAFSVLELDVEDDQIPSLSTSSKDDATASSPSRTGKSKKEVNISGDILAGERQKQGQPDIAAENYKFPLVWIDLEMTGLNVETDRILEIACIITN
        M  L NAFSVL     D+  P  S+SS +                 +++G +  G+             YK PLVWIDLEMTGLNVE DRILEIACIITN
Subjt:  MEPLVNAFSVLELDVEDDQIPSLSTSSKDDATASSPSRTGKSKKEVNISGDILAGERQKQGQPDIAAENYKFPLVWIDLEMTGLNVETDRILEIACIITN

Query:  GSLTKLVEGPDLVIHQSKECLEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLVDV
        G LT+ VEGPDLV+ Q+K+CL+KM +WCQ+HH ASGLTKKVL S I+EREAE++VIEFVKKHVGS    LAGNSVY+DF+FLKKYMP+LA LF H+LVDV
Subjt:  GSLTKLVEGPDLVIHQSKECLEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLVDV

Query:  SSVKALCFRWYPRDQKKAPPKENKHRAMDDIRESIMELKYYKENIFK
        SSVKALC RW+P +++KAP K+N HRAMDDIRESI ELKYYK+ IFK
Subjt:  SSVKALCFRWYPRDQKKAPPKENKHRAMDDIRESIMELKYYKENIFK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATGGAGCCACTTGTAAACGCATTCTCGGTGTTGGAGCTCGATGTTGAAGACGATCAAATTCCCTCTCTTTCTACTTCCTCCAAAGATGACGCTACTGCTTCTTC
CCCTTCAAGAACAGGAAAAAGCAAGAAGGAAGTTAATATCTCTGGTGATATTCTGGCAGGAGAAAGACAGAAACAAGGTCAACCAGATATAGCTGCAGAAAACTATAAAT
TTCCTCTTGTTTGGATTGACCTGGAAATGACTGGTTTAAATGTTGAAACAGATAGAATTCTGGAGATAGCTTGTATAATTACCAATGGCAGTCTGACCAAATTGGTTGAG
GGTCCCGATTTAGTGATTCACCAATCAAAAGAATGTCTAGAGAAAATGGGAGAATGGTGTCAAAGTCATCATGCGGCCAGTGGATTGACAAAAAAGGTGCTCCAAAGTAC
AATTAGTGAACGAGAAGCTGAAAAACAGGTTATAGAATTTGTGAAGAAACATGTTGGTAGCTATAAACTACACTTGGCCGGAAATTCAGTTTATATGGATTTTATTTTTT
TGAAGAAATACATGCCAGATTTAGCTGGACTTTTTTCACATGTGCTTGTTGACGTCAGTAGTGTTAAGGCTCTCTGCTTTCGCTGGTATCCAAGAGATCAAAAGAAAGCC
CCACCGAAAGAGAATAAACATAGGGCTATGGATGATATCAGAGAAAGCATAATGGAACTCAAATATTACAAGGAAAATATATTTAAGAATTCAAAAAAGTGA
mRNA sequenceShow/hide mRNA sequence
AAAGGTTTGAGTGCCATTTCTGAAAATCTTTTAGATTTGAGATTTTTTTAAAGGACAGCAATGTATTTTTACCAAAGTCCTAATTATTCACAAAAATGTATGTAAAATCT
TTAGCCCTAAAATTTATCTTATTTATTTTATACCATTTCCCAATTACAAAGTGGACGCGGAAAATTGACACAATTTGACGAGAGAGCCCTCCGTGGGCGAGGGAGGTTGT
TCGGTCGTTTGAGAGTGATACGATTAATCTCTTTGGCGGCAAGATTTGGGAAGAGAGAGGGCGATGGCGATGGAGCCACTTGTAAACGCATTCTCGGTGTTGGAGCTCGA
TGTTGAAGACGATCAAATTCCCTCTCTTTCTACTTCCTCCAAAGATGACGCTACTGCTTCTTCCCCTTCAAGAACAGGAAAAAGCAAGAAGGAAGTTAATATCTCTGGTG
ATATTCTGGCAGGAGAAAGACAGAAACAAGGTCAACCAGATATAGCTGCAGAAAACTATAAATTTCCTCTTGTTTGGATTGACCTGGAAATGACTGGTTTAAATGTTGAA
ACAGATAGAATTCTGGAGATAGCTTGTATAATTACCAATGGCAGTCTGACCAAATTGGTTGAGGGTCCCGATTTAGTGATTCACCAATCAAAAGAATGTCTAGAGAAAAT
GGGAGAATGGTGTCAAAGTCATCATGCGGCCAGTGGATTGACAAAAAAGGTGCTCCAAAGTACAATTAGTGAACGAGAAGCTGAAAAACAGGTTATAGAATTTGTGAAGA
AACATGTTGGTAGCTATAAACTACACTTGGCCGGAAATTCAGTTTATATGGATTTTATTTTTTTGAAGAAATACATGCCAGATTTAGCTGGACTTTTTTCACATGTGCTT
GTTGACGTCAGTAGTGTTAAGGCTCTCTGCTTTCGCTGGTATCCAAGAGATCAAAAGAAAGCCCCACCGAAAGAGAATAAACATAGGGCTATGGATGATATCAGAGAAAG
CATAATGGAACTCAAATATTACAAGGAAAATATATTTAAGAATTCAAAAAAGTGATGCAAGAGGAGGCACCACAACCACAAGATTACCTGAACGTGGAGACTGGAGAGGA
GTGGGTTGGTTATCACGTGCACCAACTGGGGTAGGCCATAAATGGATGGGATCGTGCTACTTGGATATTGACTTTCAAGTTTGAAGTTGGAGTTTTGATTGTTAAAAAAA
GTTTGAGAGAGCAC
Protein sequenceShow/hide protein sequence
MAMEPLVNAFSVLELDVEDDQIPSLSTSSKDDATASSPSRTGKSKKEVNISGDILAGERQKQGQPDIAAENYKFPLVWIDLEMTGLNVETDRILEIACIITNGSLTKLVE
GPDLVIHQSKECLEKMGEWCQSHHAASGLTKKVLQSTISEREAEKQVIEFVKKHVGSYKLHLAGNSVYMDFIFLKKYMPDLAGLFSHVLVDVSSVKALCFRWYPRDQKKA
PPKENKHRAMDDIRESIMELKYYKENIFKNSKK