; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc02G25700 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G25700
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionSHSP domain-containing protein
Genome locationClcChr02:37265574..37270047
RNA-Seq ExpressionClc02G25700
SyntenyClc02G25700
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR002068 - Alpha crystallin/Hsp20 domain
IPR008978 - HSP20-like chaperone
IPR045045 - Small heat shock protein RTM2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040100.1 circumsporozoite protein-like [Cucumis melo var. makuwa]8.0e-5064.67Show/hide
Query:  ASKLHNRTYEDFEPPVERSEEDGCTILTLYIPGFSKEQIQVKVSSRRKLRISGERPYK-NSKSAWQRFHKEFEIASNCDTASISAKYKGGILHVRQPLLQ
        +S  H+RTYEDFEPPVERSEEDGC ILTLYIPGF KEQI+V+VSS+RKLRISGER  K N+K   QRF+KEFEI SNC+TA+I+AKYK GILHVRQPL Q
Subjt:  ASKLHNRTYEDFEPPVERSEEDGCTILTLYIPGFSKEQIQVKVSSRRKLRISGERPYK-NSKSAWQRFHKEFEIASNCDTASISAKYKGGILHVRQPLLQ

Query:  DQSEPRTPPHDQTPKQQAENPILE--EPKQTNSTANHHAPVTNTPKINNK-------RLKEMIPGVFLKLGFSILLPLILLLFW
        DQS  +  PH         NPILE  E KQTN  +NH+ P ++TPK N K       RLKE IP VFLKL   ILLP  LLL W
Subjt:  DQSEPRTPPHDQTPKQQAENPILE--EPKQTNSTANHHAPVTNTPKINNK-------RLKEMIPGVFLKLGFSILLPLILLLFW

XP_008449876.1 PREDICTED: uncharacterized protein LOC103491622 [Cucumis melo]8.0e-5064.67Show/hide
Query:  ASKLHNRTYEDFEPPVERSEEDGCTILTLYIPGFSKEQIQVKVSSRRKLRISGERPYK-NSKSAWQRFHKEFEIASNCDTASISAKYKGGILHVRQPLLQ
        +S  H+RTYEDFEPPVERSEEDGC ILTLYIPGF KEQI+V+VSS+RKLRISGER  K N+K   QRF+KEFEI SNC+TA+I+AKYK GILHVRQPL Q
Subjt:  ASKLHNRTYEDFEPPVERSEEDGCTILTLYIPGFSKEQIQVKVSSRRKLRISGERPYK-NSKSAWQRFHKEFEIASNCDTASISAKYKGGILHVRQPLLQ

Query:  DQSEPRTPPHDQTPKQQAENPILE--EPKQTNSTANHHAPVTNTPKINNK-------RLKEMIPGVFLKLGFSILLPLILLLFW
        DQS  +  PH         NPILE  E KQTN  +NH+ P ++TPK N K       RLKE IP VFLKL   ILLP  LLL W
Subjt:  DQSEPRTPPHDQTPKQQAENPILE--EPKQTNSTANHHAPVTNTPKINNK-------RLKEMIPGVFLKLGFSILLPLILLLFW

XP_022153773.1 inactive protein RESTRICTED TEV MOVEMENT 2-like [Momordica charantia]6.0e-3752.28Show/hide
Query:  RTYEDFEPPVERSEEDGCTILTLYIPGFSKEQIQVKVSSRRKLRISGERPYKNSKSAWQRFHKEFEIASNCDTASISAKYKGGILHVRQPLLQDQSE---
        RTYEDFEPPVE S+EDGC+ILT+Y+PGFSKEQI+V+VSS  KLRISGERPY+N   AWQRFHKEF+I  NCDT+SI+AKYKGGILHVRQPL ++  +   
Subjt:  RTYEDFEPPVERSEEDGCTILTLYIPGFSKEQIQVKVSSRRKLRISGERPYKNSKSAWQRFHKEFEIASNCDTASISAKYKGGILHVRQPLLQDQSE---

Query:  --PRT-PPHDQTPKQ-QAENPILEEPKQTNSTANHHAPVTNT-----------------PKINNK------RLKEMIPGVFLKLGFSILLPLILLLF
          P+  PP  Q+ KQ QAE P  +     + TA        T                 P I +K      RLKEMI G  +KL   ILL  +L L+
Subjt:  --PRT-PPHDQTPKQ-QAENPILEEPKQTNSTANHHAPVTNT-----------------PKINNK------RLKEMIPGVFLKLGFSILLPLILLLF

XP_022995333.1 uncharacterized protein LOC111490909 [Cucurbita maxima]5.6e-3554.64Show/hide
Query:  TYEDFEPPVERSEEDGCTILTLYIPGFSKEQIQVKVSSRRKLRISGERPYKNSKSAWQRFHKEFEIASNCDTASISAKYKGGILHVRQPLL-QDQSE---
        TYEDFEP VE SEEDGC+IL+L+IPGF KEQI+V+VSS RKLRISGERPY+N    WQRFHKEFEI SNC T+ I+AKYK GILHVRQPL  QD SE   
Subjt:  TYEDFEPPVERSEEDGCTILTLYIPGFSKEQIQVKVSSRRKLRISGERPYKNSKSAWQRFHKEFEIASNCDTASISAKYKGGILHVRQPLL-QDQSE---

Query:  ---PRTPPHDQTPK---QQAENPILEEPKQTN------STANHHAPVTNTPKINNK--RLKEMIPGVFLKLGFSILLPLILLL
           P  PP  Q  K   QQAE+P  +    TN      S+        N  KI ++  RLKE+ PG+  K   ++L  ++L L
Subjt:  ---PRTPPHDQTPK---QQAENPILEEPKQTN------STANHHAPVTNTPKINNK--RLKEMIPGVFLKLGFSILLPLILLL

XP_038902536.1 inactive protein RESTRICTED TEV MOVEMENT 2-like [Benincasa hispida]2.0e-5670.43Show/hide
Query:  MASKLHNRTYEDFEPPVERSEEDGCTILTLYIPGFSKEQIQVKVSSRRKLRISGERPYKNSKSAWQRFHKEFEIASNCDTASISAKYKGGILHVRQPLLQ
        MASK H+RTYEDFEPPVERSEEDGCTILTLYIPGFSKE I+V+VSS+ KLR+SGERPY+NSK  WQRF+KEFEI SNCDTA+I+AKYKGGILHVRQPLL 
Subjt:  MASKLHNRTYEDFEPPVERSEEDGCTILTLYIPGFSKEQIQVKVSSRRKLRISGERPYKNSKSAWQRFHKEFEIASNCDTASISAKYKGGILHVRQPLLQ

Query:  DQSEPRTPPHDQTPKQQA----ENPILEEPKQTNSTANHHAPVTNTPKINNK-------RLKEMIPGVFLKLGFSILLPLILLLFW
        D S+  T    QTP+QQA    + P LEE KQTNS AN +AP T+ P INNK       RLKE+I GVFL L   ILL  ILLLFW
Subjt:  DQSEPRTPPHDQTPKQQA----ENPILEEPKQTNSTANHHAPVTNTPKINNK-------RLKEMIPGVFLKLGFSILLPLILLLFW

TrEMBL top hitse value%identityAlignment
A0A0A0L1N9 SHSP domain-containing protein2.8e-4861.96Show/hide
Query:  ASKLHNRTYEDFEPPVERSEEDGCTILTLYIPGFSKEQIQVKVSSRRKLRISGERPYK-NSKSAWQRFHKEFEIASNCDTASISAKYKGGILHVRQPLLQ
        +S  H+RTYEDFEPPVE+SEEDGCTIL LYIPGF+KEQI+V+VSS+RKLRISGER  K N+K   QRF+KEFEI SNC+T +I+AKYK GILHVRQPL Q
Subjt:  ASKLHNRTYEDFEPPVERSEEDGCTILTLYIPGFSKEQIQVKVSSRRKLRISGERPYK-NSKSAWQRFHKEFEIASNCDTASISAKYKGGILHVRQPLLQ

Query:  DQSEPRTPPHDQTPKQQAENPILEEP--KQTNSTANHHAPVTNTPKINNK-------RLKEMIPGVFLKLGFSILLPLILLLFW
        DQS+ +  PH         NPILE+   KQTN  +NH+ P ++TPK + K       RLKE IP VFLKL   ILLP   LL W
Subjt:  DQSEPRTPPHDQTPKQQAENPILEEP--KQTNSTANHHAPVTNTPKINNK-------RLKEMIPGVFLKLGFSILLPLILLLFW

A0A1S3BMF5 uncharacterized protein LOC1034916223.9e-5064.67Show/hide
Query:  ASKLHNRTYEDFEPPVERSEEDGCTILTLYIPGFSKEQIQVKVSSRRKLRISGERPYK-NSKSAWQRFHKEFEIASNCDTASISAKYKGGILHVRQPLLQ
        +S  H+RTYEDFEPPVERSEEDGC ILTLYIPGF KEQI+V+VSS+RKLRISGER  K N+K   QRF+KEFEI SNC+TA+I+AKYK GILHVRQPL Q
Subjt:  ASKLHNRTYEDFEPPVERSEEDGCTILTLYIPGFSKEQIQVKVSSRRKLRISGERPYK-NSKSAWQRFHKEFEIASNCDTASISAKYKGGILHVRQPLLQ

Query:  DQSEPRTPPHDQTPKQQAENPILE--EPKQTNSTANHHAPVTNTPKINNK-------RLKEMIPGVFLKLGFSILLPLILLLFW
        DQS  +  PH         NPILE  E KQTN  +NH+ P ++TPK N K       RLKE IP VFLKL   ILLP  LLL W
Subjt:  DQSEPRTPPHDQTPKQQAENPILE--EPKQTNSTANHHAPVTNTPKINNK-------RLKEMIPGVFLKLGFSILLPLILLLFW

A0A5A7T9W8 Circumsporozoite protein-like3.9e-5064.67Show/hide
Query:  ASKLHNRTYEDFEPPVERSEEDGCTILTLYIPGFSKEQIQVKVSSRRKLRISGERPYK-NSKSAWQRFHKEFEIASNCDTASISAKYKGGILHVRQPLLQ
        +S  H+RTYEDFEPPVERSEEDGC ILTLYIPGF KEQI+V+VSS+RKLRISGER  K N+K   QRF+KEFEI SNC+TA+I+AKYK GILHVRQPL Q
Subjt:  ASKLHNRTYEDFEPPVERSEEDGCTILTLYIPGFSKEQIQVKVSSRRKLRISGERPYK-NSKSAWQRFHKEFEIASNCDTASISAKYKGGILHVRQPLLQ

Query:  DQSEPRTPPHDQTPKQQAENPILE--EPKQTNSTANHHAPVTNTPKINNK-------RLKEMIPGVFLKLGFSILLPLILLLFW
        DQS  +  PH         NPILE  E KQTN  +NH+ P ++TPK N K       RLKE IP VFLKL   ILLP  LLL W
Subjt:  DQSEPRTPPHDQTPKQQAENPILE--EPKQTNSTANHHAPVTNTPKINNK-------RLKEMIPGVFLKLGFSILLPLILLLFW

A0A5D3DDX4 Circumsporozoite protein-like3.9e-5064.67Show/hide
Query:  ASKLHNRTYEDFEPPVERSEEDGCTILTLYIPGFSKEQIQVKVSSRRKLRISGERPYK-NSKSAWQRFHKEFEIASNCDTASISAKYKGGILHVRQPLLQ
        +S  H+RTYEDFEPPVERSEEDGC ILTLYIPGF KEQI+V+VSS+RKLRISGER  K N+K   QRF+KEFEI SNC+TA+I+AKYK GILHVRQPL Q
Subjt:  ASKLHNRTYEDFEPPVERSEEDGCTILTLYIPGFSKEQIQVKVSSRRKLRISGERPYK-NSKSAWQRFHKEFEIASNCDTASISAKYKGGILHVRQPLLQ

Query:  DQSEPRTPPHDQTPKQQAENPILE--EPKQTNSTANHHAPVTNTPKINNK-------RLKEMIPGVFLKLGFSILLPLILLLFW
        DQS  +  PH         NPILE  E KQTN  +NH+ P ++TPK N K       RLKE IP VFLKL   ILLP  LLL W
Subjt:  DQSEPRTPPHDQTPKQQAENPILE--EPKQTNSTANHHAPVTNTPKINNK-------RLKEMIPGVFLKLGFSILLPLILLLFW

A0A6J1DIF9 inactive protein RESTRICTED TEV MOVEMENT 2-like2.9e-3752.28Show/hide
Query:  RTYEDFEPPVERSEEDGCTILTLYIPGFSKEQIQVKVSSRRKLRISGERPYKNSKSAWQRFHKEFEIASNCDTASISAKYKGGILHVRQPLLQDQSE---
        RTYEDFEPPVE S+EDGC+ILT+Y+PGFSKEQI+V+VSS  KLRISGERPY+N   AWQRFHKEF+I  NCDT+SI+AKYKGGILHVRQPL ++  +   
Subjt:  RTYEDFEPPVERSEEDGCTILTLYIPGFSKEQIQVKVSSRRKLRISGERPYKNSKSAWQRFHKEFEIASNCDTASISAKYKGGILHVRQPLLQDQSE---

Query:  --PRT-PPHDQTPKQ-QAENPILEEPKQTNSTANHHAPVTNT-----------------PKINNK------RLKEMIPGVFLKLGFSILLPLILLLF
          P+  PP  Q+ KQ QAE P  +     + TA        T                 P I +K      RLKEMI G  +KL   ILL  +L L+
Subjt:  --PRT-PPHDQTPKQ-QAENPILEEPKQTNSTANHHAPVTNT-----------------PKINNK------RLKEMIPGVFLKLGFSILLPLILLLF

SwissProt top hitse value%identityAlignment
P19244 22.7 kDa class IV heat shock protein1.4e-0432Show/hide
Query:  ILTLYIPGFSKEQIQVKVSSRRKLRISGERPYKNSKSA--WQR-------FHKEFEIASNCDTASISAKYKGGIL
        ++ + +PG  K+ I+++V   R LR+SGER  +  K    W R       F ++F++  N D  S+ AK + G+L
Subjt:  ILTLYIPGFSKEQIQVKVSSRRKLRISGERPYKNSKSA--WQR-------FHKEFEIASNCDTASISAKYKGGIL

P30236 22.0 kDa class IV heat shock protein3.7e-0534.67Show/hide
Query:  ILTLYIPGFSKEQIQVKVSSRRKLRISGERPYKNSKSA--WQR-------FHKEFEIASNCDTASISAKYKGGIL
        ++ L +PG  +E+I+V+V   R LR+SGER  +  K    W R       F ++F +  N D  S+ AK + G+L
Subjt:  ILTLYIPGFSKEQIQVKVSSRRKLRISGERPYKNSKSA--WQR-------FHKEFEIASNCDTASISAKYKGGIL

Q38806 22.0 kDa heat shock protein3.1e-0431.58Show/hide
Query:  LTLYIPGFSKEQIQVKVSSRRKLRISGERPYKNSKSA--WQR-------FHKEFEIASNCDTASISAKYKGGILHV
        + L IPG  K++++++V     LR+SGER  +  K    W R       F ++F++  N D  S+ AK + G+L +
Subjt:  LTLYIPGFSKEQIQVKVSSRRKLRISGERPYKNSKSA--WQR-------FHKEFEIASNCDTASISAKYKGGILHV

Arabidopsis top hitse value%identityAlignment
AT2G27140.1 HSP20-like chaperones superfamily protein2.3e-1843.44Show/hide
Query:  NRTYEDFEPPVERSEEDGCTILTLYIPGFSKEQIQVKVSSRRKLRISGERPYKNSKSAWQRFHKEFEIASNCDTASISAKYKGGILHVRQPLLQDQSEPR
        NR Y++FEP      E G   LT+Y+PGF KEQ++V+V++ RKLR+ G+RP   +K  W RF KEF I  N D  S+SAK++G  L VR P  +   +  
Subjt:  NRTYEDFEPPVERSEEDGCTILTLYIPGFSKEQIQVKVSSRRKLRISGERPYKNSKSAWQRFHKEFEIASNCDTASISAKYKGGILHVRQPLLQDQSEPR

Query:  TPPHDQT--PKQQAENPILEEP
        +P    T  P    ENP L  P
Subjt:  TPPHDQT--PKQQAENPILEEP

AT4G10250.1 HSP20-like chaperones superfamily protein2.2e-0531.58Show/hide
Query:  LTLYIPGFSKEQIQVKVSSRRKLRISGERPYKNSKSA--WQR-------FHKEFEIASNCDTASISAKYKGGILHV
        + L IPG  K++++++V     LR+SGER  +  K    W R       F ++F++  N D  S+ AK + G+L +
Subjt:  LTLYIPGFSKEQIQVKVSSRRKLRISGERPYKNSKSA--WQR-------FHKEFEIASNCDTASISAKYKGGILHV

AT5G20970.1 HSP20-like chaperones superfamily protein6.6e-1839.06Show/hide
Query:  RTYEDFEPPVERSEEDGCTILTLYIPGFSKEQIQVKVSSRRKLRISGERPYKNSKSAWQRFHKEFEIASNCDTASISAKYKGGILHVRQPLLQ---DQSE
        R Y++FEP    + E    +L   +PGF KEQ++V V++ RKLR++GERP   +K  W RFH+E  +    D  S+SA +K   L++R P L+    Q++
Subjt:  RTYEDFEPPVERSEEDGCTILTLYIPGFSKEQIQVKVSSRRKLRISGERPYKNSKSAWQRFHKEFEIASNCDTASISAKYKGGILHVRQPLLQ---DQSE

Query:  PRTP----PHDQTPKQQAENP--ILEEP
        P TP    PHDQ  ++Q + P  ++E+P
Subjt:  PRTP----PHDQTPKQQAENP--ILEEP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCCAAATTACATAACCGAACTTATGAAGATTTCGAACCTCCGGTGGAGCGGTCGGAAGAGGATGGCTGCACCATTCTCACCCTCTACATTCCCGGCTTCAGCAA
GGAGCAAATTCAGGTTAAGGTATCCTCAAGAAGAAAGTTGAGGATTAGTGGGGAACGGCCTTACAAGAACAGCAAGAGCGCATGGCAGCGCTTCCACAAGGAGTTTGAAA
TCGCATCAAACTGCGACACTGCCAGCATTAGCGCCAAATACAAGGGCGGCATCCTTCATGTCCGCCAACCATTGTTGCAGGACCAGTCCGAGCCACGCACACCACCCCAT
GACCAAACCCCCAAACAACAAGCTGAGAACCCAATTTTGGAAGAACCAAAGCAAACTAATTCAACTGCCAACCACCACGCTCCGGTTACAAACACTCCGAAGATCAACAA
CAAGCGCTTGAAGGAGATGATTCCCGGAGTGTTCCTGAAGTTGGGGTTCTCTATTTTGCTCCCACTTATCTTATTGCTGTTTTGGATCAATGGACCAGCGATCAGCAACC
GTGGATCTATGGTCTACGACTTGCAGAAGCTTCGGTTCCTCCACTCAATGCTGCATTGTTCTCACTGCCTCATTCACCGCCAACCCGATCGCTTCGATGACTTCATATGT
TGTTCGGGCTGCGGCAAGGTGCTTGGCCAGTTCTTTGGAGGAAAATACATTGATCATAGCAAACCTATACTCGAAGCCGCCGCCAAATTGAAGAAGAGGAAGAAGGAGAA
AAGGCAGCAACTCGTACTCGAGAAGATTGGAATAGATGCCGCGGATCAACTCGCCACATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCATCCAAATTACATAACCGAACTTATGAAGATTTCGAACCTCCGGTGGAGCGGTCGGAAGAGGATGGCTGCACCATTCTCACCCTCTACATTCCCGGCTTCAGCAA
GGAGCAAATTCAGGTTAAGGTATCCTCAAGAAGAAAGTTGAGGATTAGTGGGGAACGGCCTTACAAGAACAGCAAGAGCGCATGGCAGCGCTTCCACAAGGAGTTTGAAA
TCGCATCAAACTGCGACACTGCCAGCATTAGCGCCAAATACAAGGGCGGCATCCTTCATGTCCGCCAACCATTGTTGCAGGACCAGTCCGAGCCACGCACACCACCCCAT
GACCAAACCCCCAAACAACAAGCTGAGAACCCAATTTTGGAAGAACCAAAGCAAACTAATTCAACTGCCAACCACCACGCTCCGGTTACAAACACTCCGAAGATCAACAA
CAAGCGCTTGAAGGAGATGATTCCCGGAGTGTTCCTGAAGTTGGGGTTCTCTATTTTGCTCCCACTTATCTTATTGCTGTTTTGGATCAATGGACCAGCGATCAGCAACC
GTGGATCTATGGTCTACGACTTGCAGAAGCTTCGGTTCCTCCACTCAATGCTGCATTGTTCTCACTGCCTCATTCACCGCCAACCCGATCGCTTCGATGACTTCATATGT
TGTTCGGGCTGCGGCAAGGTGCTTGGCCAGTTCTTTGGAGGAAAATACATTGATCATAGCAAACCTATACTCGAAGCCGCCGCCAAATTGAAGAAGAGGAAGAAGGAGAA
AAGGCAGCAACTCGTACTCGAGAAGATTGGAATAGATGCCGCGGATCAACTCGCCACATAA
Protein sequenceShow/hide protein sequence
MASKLHNRTYEDFEPPVERSEEDGCTILTLYIPGFSKEQIQVKVSSRRKLRISGERPYKNSKSAWQRFHKEFEIASNCDTASISAKYKGGILHVRQPLLQDQSEPRTPPH
DQTPKQQAENPILEEPKQTNSTANHHAPVTNTPKINNKRLKEMIPGVFLKLGFSILLPLILLLFWINGPAISNRGSMVYDLQKLRFLHSMLHCSHCLIHRQPDRFDDFIC
CSGCGKVLGQFFGGKYIDHSKPILEAAAKLKKRKKEKRQQLVLEKIGIDAADQLAT