; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc02G25830 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc02G25830
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionprotein MET1, chloroplastic
Genome locationClcChr02:37373540..37381099
RNA-Seq ExpressionClc02G25830
SyntenyClc02G25830
Gene Ontology termsGO:0016592 - mediator complex (cellular component)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR001478 - PDZ domain
IPR011990 - Tetratricopeptide-like helical domain superfamily
IPR021384 - Mediator complex, subunit Med21
IPR036034 - PDZ superfamily
IPR037212 - Mediator complex, subunit Med7/Med21-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149641.1 protein MET1, chloroplastic [Cucumis sativus]2.0e-15690.72Show/hide
Query:  APHYLYSSHPFPKFCLHNH--SSSSSFTLCSQ--SHPKLFPSNSLFHLSFSTSHSLKPSPFILRASDTESKSDTGLGDSDDAD-QPYEEYEVELQQPYGL
        AP YLYSSH  PK C  NH  SSSSSF LCSQ  SHPKL  S+  F  SFSTSHSLK SPFILRASDTESK+DT   DSDD + QPYEEYEVEL+QPYGL
Subjt:  APHYLYSSHPFPKFCLHNH--SSSSSFTLCSQ--SHPKLFPSNSLFHLSFSTSHSLKPSPFILRASDTESKSDTGLGDSDDAD-QPYEEYEVELQQPYGL

Query:  KFAKGRDGGTYIDAIAPGGFADKTGLFTVGDRVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSFGELTEKEIIRAERNSGVVSNKV
        KFAKGRDGGTYIDAIAPGGFADKTGLFTVGD+V+ATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSFGELTEKEIIRAERNSGVVSNKV
Subjt:  KFAKGRDGGTYIDAIAPGGFADKTGLFTVGDRVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSFGELTEKEIIRAERNSGVVSNKV

Query:  REIQLQNALRLKEQKARRENDLRQGLRLYKNAKYEEALEKFESVLGSKPTPDEASVASYNVACCYSQLNQLKAGLSALEDALEAGFEDFKRVRTDPDLSN
        REIQLQNALR+KEQKARRENDLRQGLRLYKNAKYEEALEKFESVLGSKPTPDEASVASYNVACCYSQLNQLKAGLSALEDALEAGFEDFKRVRTDPDLSN
Subjt:  REIQLQNALRLKEQKARRENDLRQGLRLYKNAKYEEALEKFESVLGSKPTPDEASVASYNVACCYSQLNQLKAGLSALEDALEAGFEDFKRVRTDPDLSN

Query:  LRTLEEFEPLVKRFDESFINENAINAIKSLFGFK
        +RTLEEFEPLVKRFDESFINENAINAIKSLFGFK
Subjt:  LRTLEEFEPLVKRFDESFINENAINAIKSLFGFK

XP_008449894.1 PREDICTED: uncharacterized protein LOC103491636 isoform X1 [Cucumis melo]1.8e-15791.27Show/hide
Query:  APHYLYSSHPFPKFCLHNHSSSSSFTLCSQ--SHPKLFPSNSLFHLSFSTSHSLKPSPFILRASDTESKSDTGLGDSDDAD-QPYEEYEVELQQPYGLKF
        APHYLYSS   PK C  NHSSSSSF LCSQ  SHPKL  S+  F  SFSTSHSLK SPFILRASDTESK+DT   DSDD + QPYEEYEVEL+QPYGLKF
Subjt:  APHYLYSSHPFPKFCLHNHSSSSSFTLCSQ--SHPKLFPSNSLFHLSFSTSHSLKPSPFILRASDTESKSDTGLGDSDDAD-QPYEEYEVELQQPYGLKF

Query:  AKGRDGGTYIDAIAPGGFADKTGLFTVGDRVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSFGELTEKEIIRAERNSGVVSNKVRE
        AKGRDGGTYIDAIAPGGFADKTGLFTVGDRV+ATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSFGELTEKEIIRAERNSGVVSNKVRE
Subjt:  AKGRDGGTYIDAIAPGGFADKTGLFTVGDRVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSFGELTEKEIIRAERNSGVVSNKVRE

Query:  IQLQNALRLKEQKARRENDLRQGLRLYKNAKYEEALEKFESVLGSKPTPDEASVASYNVACCYSQLNQLKAGLSALEDALEAGFEDFKRVRTDPDLSNLR
        IQLQNALR+KEQKARRENDLRQGLRLYKNAKYEEALEKFESVLGSKPTPDEASVASYNVACCYSQLNQLKAGLSALEDAL AGFEDFKRVRTDPDLSNLR
Subjt:  IQLQNALRLKEQKARRENDLRQGLRLYKNAKYEEALEKFESVLGSKPTPDEASVASYNVACCYSQLNQLKAGLSALEDALEAGFEDFKRVRTDPDLSNLR

Query:  TLEEFEPLVKRFDESFINENAINAIKSLFGFK
         LEEFEPLVKRFDESFINENAINAIKSLFGFK
Subjt:  TLEEFEPLVKRFDESFINENAINAIKSLFGFK

XP_022153815.1 protein MET1, chloroplastic [Momordica charantia]3.4e-14884.71Show/hide
Query:  LQAAAPHYLYSSHPFPKFCLHNHSSSSSFTLCSQSHPKLFPSNSLFHLSFSTSHSLKPSP-------FILRASDTESKSDTGLGDSD-DADQPYEEYEVE
        L   AP    SS P PKFC       SSFT      PKLFPSN+ FHL+FS+S S  P P       FI+RASD ESKSDTGLGD+D DADQPYEEY+VE
Subjt:  LQAAAPHYLYSSHPFPKFCLHNHSSSSSFTLCSQSHPKLFPSNSLFHLSFSTSHSLKPSP-------FILRASDTESKSDTGLGDSD-DADQPYEEYEVE

Query:  LQQPYGLKFAKGRDGGTYIDAIAPGGFADKTGLFTVGDRVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSFGELTEKEIIRAERNS
        L+QPYGLKFAKGRDGGTYIDAIAPGG ADKTGLFTVGD+VIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSFGELTEKEIIRAERNS
Subjt:  LQQPYGLKFAKGRDGGTYIDAIAPGGFADKTGLFTVGDRVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSFGELTEKEIIRAERNS

Query:  GVVSNKVREIQLQNALRLKEQKARRENDLRQGLRLYKNAKYEEALEKFESVLGSKPTPDEASVASYNVACCYSQLNQLKAGLSALEDALEAGFEDFKRVR
        GVVSNKVREIQLQNA R+KEQKARRENDLR+GL+LYKNAKYEEALEKFESVLGSKP PDEASVASYNVACCYSQLNQLKAGLSALEDALEAGFEDFKRVR
Subjt:  GVVSNKVREIQLQNALRLKEQKARRENDLRQGLRLYKNAKYEEALEKFESVLGSKPTPDEASVASYNVACCYSQLNQLKAGLSALEDALEAGFEDFKRVR

Query:  TDPDLSNLRTLEEFEPLVKRFDESFINENAINAIKSLFGF
        TDPDLS LRT EEFEPLVKRFDESFINENAINAIKSLFGF
Subjt:  TDPDLSNLRTLEEFEPLVKRFDESFINENAINAIKSLFGF

XP_022996247.1 protein MET1, chloroplastic [Cucurbita maxima]8.6e-14484.4Show/hide
Query:  SSHPFPKFCLHNHSSSSSFTLCSQSHPKLFPSNSLFHLSFSTS----HSLKPSPFILRASDTESKSDTGLGDSDDADQPYEEYEVELQQPYGLKFAKGRD
        SS P PKFC       SSF LC  SHPKLF SNS FHLSF+TS    HSLKPS F++RASD +S           ADQPYEEYEVEL+QPYGLKF KGRD
Subjt:  SSHPFPKFCLHNHSSSSSFTLCSQSHPKLFPSNSLFHLSFSTS----HSLKPSPFILRASDTESKSDTGLGDSDDADQPYEEYEVELQQPYGLKFAKGRD

Query:  GGTYIDAIAPGGFADKTGLFTVGDRVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSFGELTEKEIIRAERNSGVVSNKVREIQLQN
        GGTYIDAIAPGG ADKTGLFTVGD+VIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKM+KRYGKTD +GELTEKE+IRAERNSGVVSNKVREIQ+QN
Subjt:  GGTYIDAIAPGGFADKTGLFTVGDRVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSFGELTEKEIIRAERNSGVVSNKVREIQLQN

Query:  ALRLKEQKARRENDLRQGLRLYKNAKYEEALEKFESVLGSKPTPDEASVASYNVACCYSQLNQLKAGLSALEDALEAGFEDFKRVRTDPDLSNLRTLEEF
        A+RLKEQKARRE+DLRQGLRLYKNAKYEEALEKFESVLGSKPTPDEASVASYNVACCYSQLN+LKAGLSALEDAL AGFEDFKR+RTDPDLSNLRTLEEF
Subjt:  ALRLKEQKARRENDLRQGLRLYKNAKYEEALEKFESVLGSKPTPDEASVASYNVACCYSQLNQLKAGLSALEDALEAGFEDFKRVRTDPDLSNLRTLEEF

Query:  EPLVKRFDESFINENAINAIKSLFGFK
        E L+KRFDESFINENAINAIKSLFGFK
Subjt:  EPLVKRFDESFINENAINAIKSLFGFK

XP_038902944.1 protein MET1, chloroplastic [Benincasa hispida]3.7e-16393.41Show/hide
Query:  APHYLY---SSHPFPKFCLHNHSSSSSFTLCSQSHPKLFPSNSLFHLSFSTSHSLKPSPFILRASDTESKSDTGLGDSDDAD--QPYEEYEVELQQPYGL
        A HYLY   SSHP PK    N +SSSSFTL SQSHPKLFP    FH+SFSTS SLKPSPFILRASDTESKSDTGLGDSDDAD  QPYEEYEVELQQPYGL
Subjt:  APHYLY---SSHPFPKFCLHNHSSSSSFTLCSQSHPKLFPSNSLFHLSFSTSHSLKPSPFILRASDTESKSDTGLGDSDDAD--QPYEEYEVELQQPYGL

Query:  KFAKGRDGGTYIDAIAPGGFADKTGLFTVGDRVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSFGELTEKEIIRAERNSGVVSNKV
        KFAKGRDGGTYIDAIAPGGFADKTGLFTVGD+VIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQK+YGKTDSFGELTEKEIIRAERNSGVVSNKV
Subjt:  KFAKGRDGGTYIDAIAPGGFADKTGLFTVGDRVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSFGELTEKEIIRAERNSGVVSNKV

Query:  REIQLQNALRLKEQKARRENDLRQGLRLYKNAKYEEALEKFESVLGSKPTPDEASVASYNVACCYSQLNQLKAGLSALEDALEAGFEDFKRVRTDPDLSN
        REIQLQNALRLKEQKARRENDLRQGLRLYKNAKYEEALEKFESVLGSKPTPDEASVASYNVACCYSQLNQLKAGLSALEDALEAGFEDFKRVRTDPDLSN
Subjt:  REIQLQNALRLKEQKARRENDLRQGLRLYKNAKYEEALEKFESVLGSKPTPDEASVASYNVACCYSQLNQLKAGLSALEDALEAGFEDFKRVRTDPDLSN

Query:  LRTLEEFEPLVKRFDESFINENAINAIKSLFGFK
        LRTLEEFEPLVKRFDESFINENAINAIKSLFGFK
Subjt:  LRTLEEFEPLVKRFDESFINENAINAIKSLFGFK

TrEMBL top hitse value%identityAlignment
A0A0A0KWR6 Uncharacterized protein9.6e-15790.72Show/hide
Query:  APHYLYSSHPFPKFCLHNH--SSSSSFTLCSQ--SHPKLFPSNSLFHLSFSTSHSLKPSPFILRASDTESKSDTGLGDSDDAD-QPYEEYEVELQQPYGL
        AP YLYSSH  PK C  NH  SSSSSF LCSQ  SHPKL  S+  F  SFSTSHSLK SPFILRASDTESK+DT   DSDD + QPYEEYEVEL+QPYGL
Subjt:  APHYLYSSHPFPKFCLHNH--SSSSSFTLCSQ--SHPKLFPSNSLFHLSFSTSHSLKPSPFILRASDTESKSDTGLGDSDDAD-QPYEEYEVELQQPYGL

Query:  KFAKGRDGGTYIDAIAPGGFADKTGLFTVGDRVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSFGELTEKEIIRAERNSGVVSNKV
        KFAKGRDGGTYIDAIAPGGFADKTGLFTVGD+V+ATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSFGELTEKEIIRAERNSGVVSNKV
Subjt:  KFAKGRDGGTYIDAIAPGGFADKTGLFTVGDRVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSFGELTEKEIIRAERNSGVVSNKV

Query:  REIQLQNALRLKEQKARRENDLRQGLRLYKNAKYEEALEKFESVLGSKPTPDEASVASYNVACCYSQLNQLKAGLSALEDALEAGFEDFKRVRTDPDLSN
        REIQLQNALR+KEQKARRENDLRQGLRLYKNAKYEEALEKFESVLGSKPTPDEASVASYNVACCYSQLNQLKAGLSALEDALEAGFEDFKRVRTDPDLSN
Subjt:  REIQLQNALRLKEQKARRENDLRQGLRLYKNAKYEEALEKFESVLGSKPTPDEASVASYNVACCYSQLNQLKAGLSALEDALEAGFEDFKRVRTDPDLSN

Query:  LRTLEEFEPLVKRFDESFINENAINAIKSLFGFK
        +RTLEEFEPLVKRFDESFINENAINAIKSLFGFK
Subjt:  LRTLEEFEPLVKRFDESFINENAINAIKSLFGFK

A0A1S3BMG9 uncharacterized protein LOC103491636 isoform X18.7e-15891.27Show/hide
Query:  APHYLYSSHPFPKFCLHNHSSSSSFTLCSQ--SHPKLFPSNSLFHLSFSTSHSLKPSPFILRASDTESKSDTGLGDSDDAD-QPYEEYEVELQQPYGLKF
        APHYLYSS   PK C  NHSSSSSF LCSQ  SHPKL  S+  F  SFSTSHSLK SPFILRASDTESK+DT   DSDD + QPYEEYEVEL+QPYGLKF
Subjt:  APHYLYSSHPFPKFCLHNHSSSSSFTLCSQ--SHPKLFPSNSLFHLSFSTSHSLKPSPFILRASDTESKSDTGLGDSDDAD-QPYEEYEVELQQPYGLKF

Query:  AKGRDGGTYIDAIAPGGFADKTGLFTVGDRVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSFGELTEKEIIRAERNSGVVSNKVRE
        AKGRDGGTYIDAIAPGGFADKTGLFTVGDRV+ATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSFGELTEKEIIRAERNSGVVSNKVRE
Subjt:  AKGRDGGTYIDAIAPGGFADKTGLFTVGDRVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSFGELTEKEIIRAERNSGVVSNKVRE

Query:  IQLQNALRLKEQKARRENDLRQGLRLYKNAKYEEALEKFESVLGSKPTPDEASVASYNVACCYSQLNQLKAGLSALEDALEAGFEDFKRVRTDPDLSNLR
        IQLQNALR+KEQKARRENDLRQGLRLYKNAKYEEALEKFESVLGSKPTPDEASVASYNVACCYSQLNQLKAGLSALEDAL AGFEDFKRVRTDPDLSNLR
Subjt:  IQLQNALRLKEQKARRENDLRQGLRLYKNAKYEEALEKFESVLGSKPTPDEASVASYNVACCYSQLNQLKAGLSALEDALEAGFEDFKRVRTDPDLSNLR

Query:  TLEEFEPLVKRFDESFINENAINAIKSLFGFK
         LEEFEPLVKRFDESFINENAINAIKSLFGFK
Subjt:  TLEEFEPLVKRFDESFINENAINAIKSLFGFK

A0A5D3DEH5 Putative tyrosine phosphatase8.7e-15891.27Show/hide
Query:  APHYLYSSHPFPKFCLHNHSSSSSFTLCSQ--SHPKLFPSNSLFHLSFSTSHSLKPSPFILRASDTESKSDTGLGDSDDAD-QPYEEYEVELQQPYGLKF
        APHYLYSS   PK C  NHSSSSSF LCSQ  SHPKL  S+  F  SFSTSHSLK SPFILRASDTESK+DT   DSDD + QPYEEYEVEL+QPYGLKF
Subjt:  APHYLYSSHPFPKFCLHNHSSSSSFTLCSQ--SHPKLFPSNSLFHLSFSTSHSLKPSPFILRASDTESKSDTGLGDSDDAD-QPYEEYEVELQQPYGLKF

Query:  AKGRDGGTYIDAIAPGGFADKTGLFTVGDRVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSFGELTEKEIIRAERNSGVVSNKVRE
        AKGRDGGTYIDAIAPGGFADKTGLFTVGDRV+ATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSFGELTEKEIIRAERNSGVVSNKVRE
Subjt:  AKGRDGGTYIDAIAPGGFADKTGLFTVGDRVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSFGELTEKEIIRAERNSGVVSNKVRE

Query:  IQLQNALRLKEQKARRENDLRQGLRLYKNAKYEEALEKFESVLGSKPTPDEASVASYNVACCYSQLNQLKAGLSALEDALEAGFEDFKRVRTDPDLSNLR
        IQLQNALR+KEQKARRENDLRQGLRLYKNAKYEEALEKFESVLGSKPTPDEASVASYNVACCYSQLNQLKAGLSALEDAL AGFEDFKRVRTDPDLSNLR
Subjt:  IQLQNALRLKEQKARRENDLRQGLRLYKNAKYEEALEKFESVLGSKPTPDEASVASYNVACCYSQLNQLKAGLSALEDALEAGFEDFKRVRTDPDLSNLR

Query:  TLEEFEPLVKRFDESFINENAINAIKSLFGFK
         LEEFEPLVKRFDESFINENAINAIKSLFGFK
Subjt:  TLEEFEPLVKRFDESFINENAINAIKSLFGFK

A0A6J1DHX0 protein MET1, chloroplastic1.6e-14884.71Show/hide
Query:  LQAAAPHYLYSSHPFPKFCLHNHSSSSSFTLCSQSHPKLFPSNSLFHLSFSTSHSLKPSP-------FILRASDTESKSDTGLGDSD-DADQPYEEYEVE
        L   AP    SS P PKFC       SSFT      PKLFPSN+ FHL+FS+S S  P P       FI+RASD ESKSDTGLGD+D DADQPYEEY+VE
Subjt:  LQAAAPHYLYSSHPFPKFCLHNHSSSSSFTLCSQSHPKLFPSNSLFHLSFSTSHSLKPSP-------FILRASDTESKSDTGLGDSD-DADQPYEEYEVE

Query:  LQQPYGLKFAKGRDGGTYIDAIAPGGFADKTGLFTVGDRVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSFGELTEKEIIRAERNS
        L+QPYGLKFAKGRDGGTYIDAIAPGG ADKTGLFTVGD+VIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSFGELTEKEIIRAERNS
Subjt:  LQQPYGLKFAKGRDGGTYIDAIAPGGFADKTGLFTVGDRVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSFGELTEKEIIRAERNS

Query:  GVVSNKVREIQLQNALRLKEQKARRENDLRQGLRLYKNAKYEEALEKFESVLGSKPTPDEASVASYNVACCYSQLNQLKAGLSALEDALEAGFEDFKRVR
        GVVSNKVREIQLQNA R+KEQKARRENDLR+GL+LYKNAKYEEALEKFESVLGSKP PDEASVASYNVACCYSQLNQLKAGLSALEDALEAGFEDFKRVR
Subjt:  GVVSNKVREIQLQNALRLKEQKARRENDLRQGLRLYKNAKYEEALEKFESVLGSKPTPDEASVASYNVACCYSQLNQLKAGLSALEDALEAGFEDFKRVR

Query:  TDPDLSNLRTLEEFEPLVKRFDESFINENAINAIKSLFGF
        TDPDLS LRT EEFEPLVKRFDESFINENAINAIKSLFGF
Subjt:  TDPDLSNLRTLEEFEPLVKRFDESFINENAINAIKSLFGF

A0A6J1K1D9 protein MET1, chloroplastic4.2e-14484.4Show/hide
Query:  SSHPFPKFCLHNHSSSSSFTLCSQSHPKLFPSNSLFHLSFSTS----HSLKPSPFILRASDTESKSDTGLGDSDDADQPYEEYEVELQQPYGLKFAKGRD
        SS P PKFC       SSF LC  SHPKLF SNS FHLSF+TS    HSLKPS F++RASD +S           ADQPYEEYEVEL+QPYGLKF KGRD
Subjt:  SSHPFPKFCLHNHSSSSSFTLCSQSHPKLFPSNSLFHLSFSTS----HSLKPSPFILRASDTESKSDTGLGDSDDADQPYEEYEVELQQPYGLKFAKGRD

Query:  GGTYIDAIAPGGFADKTGLFTVGDRVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSFGELTEKEIIRAERNSGVVSNKVREIQLQN
        GGTYIDAIAPGG ADKTGLFTVGD+VIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKM+KRYGKTD +GELTEKE+IRAERNSGVVSNKVREIQ+QN
Subjt:  GGTYIDAIAPGGFADKTGLFTVGDRVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSFGELTEKEIIRAERNSGVVSNKVREIQLQN

Query:  ALRLKEQKARRENDLRQGLRLYKNAKYEEALEKFESVLGSKPTPDEASVASYNVACCYSQLNQLKAGLSALEDALEAGFEDFKRVRTDPDLSNLRTLEEF
        A+RLKEQKARRE+DLRQGLRLYKNAKYEEALEKFESVLGSKPTPDEASVASYNVACCYSQLN+LKAGLSALEDAL AGFEDFKR+RTDPDLSNLRTLEEF
Subjt:  ALRLKEQKARRENDLRQGLRLYKNAKYEEALEKFESVLGSKPTPDEASVASYNVACCYSQLNQLKAGLSALEDALEAGFEDFKRVRTDPDLSNLRTLEEF

Query:  EPLVKRFDESFINENAINAIKSLFGFK
        E L+KRFDESFINENAINAIKSLFGFK
Subjt:  EPLVKRFDESFINENAINAIKSLFGFK

SwissProt top hitse value%identityAlignment
C0LU16 Mediator of RNA polymerase II transcription subunit 213.2e-4079.82Show/hide
Query:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPSHEP-TEDSANIAEQPKLMSAALVKAAKQFDALVAALPLSDGGEEEQLKRIAELQVEN
        MDIISQLQEQVNTIAA+ FN FGTLQRDAPPV+LSPNYPEPP+    T+D+    EQPK +SA LVKAAKQFDALVAALPLS+GGE  QLKRIAELQVEN
Subjt:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPSHEP-TEDSANIAEQPKLMSAALVKAAKQFDALVAALPLSDGGEEEQLKRIAELQVEN

Query:  DAVGQELQKQLQAA
        D VGQELQKQL+AA
Subjt:  DAVGQELQKQLQAA

Q6BER6 Mediator of RNA polymerase II transcription subunit 218.2e-0430.28Show/hide
Query:  DIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPSHEPTEDSANIAEQPKLMSAALVKAAKQFDALVAALPLSDGGEEEQLKRIAELQVENDA
        D ++QLQ+ +N +A L  N  G LQ  APP        E       ED  N A    + +A + KAAK  + L+ + P+  G +E +   + E  ++ND 
Subjt:  DIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPSHEPTEDSANIAEQPKLMSAALVKAAKQFDALVAALPLSDGGEEEQLKRIAELQVENDA

Query:  VGQELQKQL
          +E   +L
Subjt:  VGQELQKQL

Q94BS2 Protein MET1, chloroplastic6.3e-11366.16Show/hide
Query:  LYSSHPFPKFCLHNHSSSSSFTLCSQSHPKLFPSNSLFHLSFSTS----HSLKPSPFILRASDTESKSDTGLGDSDDADQPYEEYEVELQQPYGLKFAKG
        LYSS   P+       +  + +L +QS      + SLF  S S S    H  K     L+AS+TES +    G   + ++ YE YE+E++QPYGLKF KG
Subjt:  LYSSHPFPKFCLHNHSSSSSFTLCSQSHPKLFPSNSLFHLSFSTS----HSLKPSPFILRASDTESKSDTGLGDSDDADQPYEEYEVELQQPYGLKFAKG

Query:  RDGGTYIDAIAPGGFADKTGLFTVGDRVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSFGELTEKEIIRAERNSGVVSNKVREIQL
        RDGGTYIDAI PGG ADKTG FTVGDRVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLM+M+KR GK +  GELTEKEIIRAERN+G +S+++REIQ+
Subjt:  RDGGTYIDAIAPGGFADKTGLFTVGDRVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSFGELTEKEIIRAERNSGVVSNKVREIQL

Query:  QNALRLKEQKARRENDLRQGLRLYKNAKYEEALEKFESVLGSKPTPDEASVASYNVACCYSQLNQLKAGLSALEDALEAGFEDFKRVRTDPDLSNLRTLE
        QN L+ KEQKA+RE DLR+GL+  KN KYEEALE+FESVLGSKPTP+EASVASYNVACCYS+LNQ++AGLSALE+AL++G+EDFKR+R+DPDL  LR  +
Subjt:  QNALRLKEQKARRENDLRQGLRLYKNAKYEEALEKFESVLGSKPTPDEASVASYNVACCYSQLNQLKAGLSALEDALEAGFEDFKRVRTDPDLSNLRTLE

Query:  EFEPLVKRFDESFINENAINAIKSLFGF
        +F+PL+K+FDESFINE+AINAIKSLFGF
Subjt:  EFEPLVKRFDESFINENAINAIKSLFGF

Arabidopsis top hitse value%identityAlignment
AT1G55480.1 protein containing PDZ domain, a K-box domain, and a TPR region4.4e-11466.16Show/hide
Query:  LYSSHPFPKFCLHNHSSSSSFTLCSQSHPKLFPSNSLFHLSFSTS----HSLKPSPFILRASDTESKSDTGLGDSDDADQPYEEYEVELQQPYGLKFAKG
        LYSS   P+       +  + +L +QS      + SLF  S S S    H  K     L+AS+TES +    G   + ++ YE YE+E++QPYGLKF KG
Subjt:  LYSSHPFPKFCLHNHSSSSSFTLCSQSHPKLFPSNSLFHLSFSTS----HSLKPSPFILRASDTESKSDTGLGDSDDADQPYEEYEVELQQPYGLKFAKG

Query:  RDGGTYIDAIAPGGFADKTGLFTVGDRVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSFGELTEKEIIRAERNSGVVSNKVREIQL
        RDGGTYIDAI PGG ADKTG FTVGDRVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLM+M+KR GK +  GELTEKEIIRAERN+G +S+++REIQ+
Subjt:  RDGGTYIDAIAPGGFADKTGLFTVGDRVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSFGELTEKEIIRAERNSGVVSNKVREIQL

Query:  QNALRLKEQKARRENDLRQGLRLYKNAKYEEALEKFESVLGSKPTPDEASVASYNVACCYSQLNQLKAGLSALEDALEAGFEDFKRVRTDPDLSNLRTLE
        QN L+ KEQKA+RE DLR+GL+  KN KYEEALE+FESVLGSKPTP+EASVASYNVACCYS+LNQ++AGLSALE+AL++G+EDFKR+R+DPDL  LR  +
Subjt:  QNALRLKEQKARRENDLRQGLRLYKNAKYEEALEKFESVLGSKPTPDEASVASYNVACCYSQLNQLKAGLSALEDALEAGFEDFKRVRTDPDLSNLRTLE

Query:  EFEPLVKRFDESFINENAINAIKSLFGF
        +F+PL+K+FDESFINE+AINAIKSLFGF
Subjt:  EFEPLVKRFDESFINENAINAIKSLFGF

AT3G01510.1 like SEX4 11.3e-0427.38Show/hide
Query:  EYEVELQQPYGLKFAKGRDGGTYIDAIAPGGFADKTGLFTVGDRVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRY
        EY V L++P G++FA   DG  ++ AI  G  A+K  +  VGD +   S   G  +    ++G T   + ++ G   + +++ +
Subjt:  EYEVELQQPYGLKFAKGRDGGTYIDAIAPGGFADKTGLFTVGDRVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRY

AT4G04780.1 mediator 212.3e-4179.82Show/hide
Query:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPSHEP-TEDSANIAEQPKLMSAALVKAAKQFDALVAALPLSDGGEEEQLKRIAELQVEN
        MDIISQLQEQVNTIAA+ FN FGTLQRDAPPV+LSPNYPEPP+    T+D+    EQPK +SA LVKAAKQFDALVAALPLS+GGE  QLKRIAELQVEN
Subjt:  MDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPSHEP-TEDSANIAEQPKLMSAALVKAAKQFDALVAALPLSDGGEEEQLKRIAELQVEN

Query:  DAVGQELQKQLQAA
        D VGQELQKQL+AA
Subjt:  DAVGQELQKQLQAA

AT5G17170.1 rubredoxin family protein1.6e-0741.43Show/hide
Query:  EVELQQPYGLKFAKGRDGGTYIDAIAPGGFADKTGLFTVGDRVIATSAVFGTEIWPAAEYGRTMYTIRQR
        EVE+ +P GL   + + GG  I  +  GG A K GL + GD+V+ TS+ FG E+WPA + G T   I+ +
Subjt:  EVELQQPYGLKFAKGRDGGTYIDAIAPGGFADKTGLFTVGDRVIATSAVFGTEIWPAAEYGRTMYTIRQR

AT5G17170.2 rubredoxin family protein1.6e-0741.43Show/hide
Query:  EVELQQPYGLKFAKGRDGGTYIDAIAPGGFADKTGLFTVGDRVIATSAVFGTEIWPAAEYGRTMYTIRQR
        EVE+ +P GL   + + GG  I  +  GG A K GL + GD+V+ TS+ FG E+WPA + G T   I+ +
Subjt:  EVELQQPYGLKFAKGRDGGTYIDAIAPGGFADKTGLFTVGDRVIATSAVFGTEIWPAAEYGRTMYTIRQR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGAGAAACCTGATAGTAGTAACTTTATCCCCATGGGTGAAGAGTCCAGTCTTGTCGGCAGAATCACCAGGTTGGTCAGCATGAACGGAATCTCGGAGTCCAATGT
CGGACGCTCTGGCAATGAAAGGAGGACAAAAGAAACCCTAGCTCATCTGGTTCCTCTCCCTCTCACGTCCAGCCGGCTAGGCCCTCCCTTGTCTCCGGCAGCAGCGCGAC
GATCACGAACCCGCGATGACAGTCCTTGGAGGTTAACGGCGGATCTTACTCCTAATCATGATTGGGTATTGTTCGCTGAATCATCTTCCGGACATTTCTTCTTAGGGATA
AGGTTGAAGATGGACATAATTTCCCAACTGCAGGAACAAGTTAACACAATTGCTGCATTAGCTTTCAACACATTTGGGACATTACAAAGAGACGCTCCTCCAGTTCGTTT
ATCCCCTAATTACCCCGAACCACCGTCTCACGAACCTACGGAGGACTCTGCAAATATCGCAGAGCAGCCCAAGCTTATGAGTGCCGCTTTGGTGAAAGCTGCTAAGCAGT
TTGATGCATTGGTTGCAGCATTGCCTCTATCTGATGGAGGTGAAGAAGAGCAGTTGAAAAGGATTGCAGAACTACAGGTTGAGAACGATGCTGTAGGTCAAGAACTTCAA
AAGCAACTACAAGCAGCAGCTCCCCATTATCTGTATTCTTCCCACCCATTTCCCAAATTTTGCCTTCATAACCATTCCTCTTCCTCTTCCTTCACTCTATGCTCCCAATC
CCATCCCAAACTCTTTCCCTCCAACTCTCTCTTTCATCTCTCTTTTTCAACCTCTCATTCCCTTAAACCCTCACCTTTCATCCTCAGAGCATCCGATACAGAATCCAAAA
GCGACACTGGACTTGGTGATTCAGATGATGCTGACCAACCTTATGAAGAGTATGAAGTCGAGCTACAGCAACCTTATGGTTTGAAATTCGCTAAGGGCCGAGATGGTGGA
ACTTATATCGACGCCATTGCACCTGGAGGTTTTGCCGACAAGACTGGATTATTCACTGTTGGAGATAGAGTTATTGCTACAAGTGCAGTATTTGGGACAGAGATATGGCC
TGCTGCTGAATACGGAAGGACAATGTACACAATTCGGCAAAGAATTGGTCCATTACTCATGAAAATGCAGAAGAGATATGGGAAAACAGATAGTTTTGGTGAGTTAACGG
AAAAGGAGATAATCAGAGCAGAAAGAAACTCGGGGGTAGTCAGTAATAAAGTGAGAGAAATTCAATTGCAAAATGCCTTGAGGTTGAAGGAGCAGAAAGCACGCAGAGAA
AATGACCTACGCCAAGGACTGCGTCTCTATAAGAATGCTAAATATGAGGAAGCATTAGAGAAATTCGAATCAGTGTTGGGATCAAAACCAACTCCGGACGAAGCCTCGGT
CGCCAGTTACAATGTTGCATGCTGTTATTCCCAACTAAATCAGTTGAAAGCTGGGCTATCAGCACTTGAAGACGCCTTGGAAGCAGGATTTGAAGACTTTAAGAGAGTTC
GGACAGATCCCGATCTATCAAACCTAAGGACCTTGGAGGAATTTGAGCCTCTCGTGAAAAGGTTTGATGAATCATTTATCAATGAGAATGCAATCAATGCCATCAAGTCG
CTATTTGGCTTCAAAAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGAGAAACCTGATAGTAGTAACTTTATCCCCATGGGTGAAGAGTCCAGTCTTGTCGGCAGAATCACCAGGTTGGTCAGCATGAACGGAATCTCGGAGTCCAATGT
CGGACGCTCTGGCAATGAAAGGAGGACAAAAGAAACCCTAGCTCATCTGGTTCCTCTCCCTCTCACGTCCAGCCGGCTAGGCCCTCCCTTGTCTCCGGCAGCAGCGCGAC
GATCACGAACCCGCGATGACAGTCCTTGGAGGTTAACGGCGGATCTTACTCCTAATCATGATTGGGTATTGTTCGCTGAATCATCTTCCGGACATTTCTTCTTAGGGATA
AGGTTGAAGATGGACATAATTTCCCAACTGCAGGAACAAGTTAACACAATTGCTGCATTAGCTTTCAACACATTTGGGACATTACAAAGAGACGCTCCTCCAGTTCGTTT
ATCCCCTAATTACCCCGAACCACCGTCTCACGAACCTACGGAGGACTCTGCAAATATCGCAGAGCAGCCCAAGCTTATGAGTGCCGCTTTGGTGAAAGCTGCTAAGCAGT
TTGATGCATTGGTTGCAGCATTGCCTCTATCTGATGGAGGTGAAGAAGAGCAGTTGAAAAGGATTGCAGAACTACAGGTTGAGAACGATGCTGTAGGTCAAGAACTTCAA
AAGCAACTACAAGCAGCAGCTCCCCATTATCTGTATTCTTCCCACCCATTTCCCAAATTTTGCCTTCATAACCATTCCTCTTCCTCTTCCTTCACTCTATGCTCCCAATC
CCATCCCAAACTCTTTCCCTCCAACTCTCTCTTTCATCTCTCTTTTTCAACCTCTCATTCCCTTAAACCCTCACCTTTCATCCTCAGAGCATCCGATACAGAATCCAAAA
GCGACACTGGACTTGGTGATTCAGATGATGCTGACCAACCTTATGAAGAGTATGAAGTCGAGCTACAGCAACCTTATGGTTTGAAATTCGCTAAGGGCCGAGATGGTGGA
ACTTATATCGACGCCATTGCACCTGGAGGTTTTGCCGACAAGACTGGATTATTCACTGTTGGAGATAGAGTTATTGCTACAAGTGCAGTATTTGGGACAGAGATATGGCC
TGCTGCTGAATACGGAAGGACAATGTACACAATTCGGCAAAGAATTGGTCCATTACTCATGAAAATGCAGAAGAGATATGGGAAAACAGATAGTTTTGGTGAGTTAACGG
AAAAGGAGATAATCAGAGCAGAAAGAAACTCGGGGGTAGTCAGTAATAAAGTGAGAGAAATTCAATTGCAAAATGCCTTGAGGTTGAAGGAGCAGAAAGCACGCAGAGAA
AATGACCTACGCCAAGGACTGCGTCTCTATAAGAATGCTAAATATGAGGAAGCATTAGAGAAATTCGAATCAGTGTTGGGATCAAAACCAACTCCGGACGAAGCCTCGGT
CGCCAGTTACAATGTTGCATGCTGTTATTCCCAACTAAATCAGTTGAAAGCTGGGCTATCAGCACTTGAAGACGCCTTGGAAGCAGGATTTGAAGACTTTAAGAGAGTTC
GGACAGATCCCGATCTATCAAACCTAAGGACCTTGGAGGAATTTGAGCCTCTCGTGAAAAGGTTTGATGAATCATTTATCAATGAGAATGCAATCAATGCCATCAAGTCG
CTATTTGGCTTCAAAAATTGAAAACCAGACTCTTCTACAGTCATCTTTTATTTAATAATTCACATTCTTGTTGTCACATCTTGTATAAAAGTATTCAGACCTAGCTTTTA
GATGAGTAACAAAAGAATTTCAATGGAATTTGT
Protein sequenceShow/hide protein sequence
MKEKPDSSNFIPMGEESSLVGRITRLVSMNGISESNVGRSGNERRTKETLAHLVPLPLTSSRLGPPLSPAAARRSRTRDDSPWRLTADLTPNHDWVLFAESSSGHFFLGI
RLKMDIISQLQEQVNTIAALAFNTFGTLQRDAPPVRLSPNYPEPPSHEPTEDSANIAEQPKLMSAALVKAAKQFDALVAALPLSDGGEEEQLKRIAELQVENDAVGQELQ
KQLQAAAPHYLYSSHPFPKFCLHNHSSSSSFTLCSQSHPKLFPSNSLFHLSFSTSHSLKPSPFILRASDTESKSDTGLGDSDDADQPYEEYEVELQQPYGLKFAKGRDGG
TYIDAIAPGGFADKTGLFTVGDRVIATSAVFGTEIWPAAEYGRTMYTIRQRIGPLLMKMQKRYGKTDSFGELTEKEIIRAERNSGVVSNKVREIQLQNALRLKEQKARRE
NDLRQGLRLYKNAKYEEALEKFESVLGSKPTPDEASVASYNVACCYSQLNQLKAGLSALEDALEAGFEDFKRVRTDPDLSNLRTLEEFEPLVKRFDESFINENAINAIKS
LFGFKN