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Clc03G00720 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc03G00720
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr03:618321..625286
RNA-Seq ExpressionClc03G00720
SyntenyClc03G00720
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN65814.1 hypothetical protein Csa_023311 [Cucumis sativus]6.7e-1873.24Show/hide
Query:  MGLRAGRLCLLLLFLVVIVWCLPISGKDDDKMENIATTMVEKRSLIVKINDYDDPTPNQGHNPFKSKPKKP
        MGLRAGRLCLLL+F+V+IV  LPISGK D +M+   T M  KR L VKINDYDDP+PN+GHNPFKSKPKKP
Subjt:  MGLRAGRLCLLLLFLVVIVWCLPISGKDDDKMENIATTMVEKRSLIVKINDYDDPTPNQGHNPFKSKPKKP
XP_022964739.1 uncharacterized protein LOC111464728 [Cucurbita moschata]1.4e-1865.82Show/hide
Query:  MGLRAGRLCLLLLFLVVIVWCLPISGKDDDKMENIATTMVEKRSLIVKINDYDDPTPNQGHNPFKSKPKKPHNDPTRKG
        MGLRAGRLC LLLF+V+IVWCLP+SGK D+ M+   + M+ K+SLI+ INDYDDPT NQ H+PFKSKPK P     RKG
Subjt:  MGLRAGRLCLLLLFLVVIVWCLPISGKDDDKMENIATTMVEKRSLIVKINDYDDPTPNQGHNPFKSKPKKPHNDPTRKG
XP_022970490.1 uncharacterized protein LOC111469456 [Cucurbita maxima]4.4e-1764.56Show/hide
Query:  MGLRAGRLCLLLLFLVVIVWCLPISGKDDDKMENIATTMVEKRSLIVKINDYDDPTPNQGHNPFKSKPKKPHNDPTRKG
        MGLRAGRL  LLLF+V+I WCLP+SGK D+ M+   + M+ KRSLI+ INDYDDPT NQ H+PFKSKPK P     RKG
Subjt:  MGLRAGRLCLLLLFLVVIVWCLPISGKDDDKMENIATTMVEKRSLIVKINDYDDPTPNQGHNPFKSKPKKPHNDPTRKG
TrEMBL top hitse value%identityAlignment
A0A0A0LXM5 Uncharacterized protein3.3e-1873.24Show/hide
Query:  MGLRAGRLCLLLLFLVVIVWCLPISGKDDDKMENIATTMVEKRSLIVKINDYDDPTPNQGHNPFKSKPKKP
        MGLRAGRLCLLL+F+V+IV  LPISGK D +M+   T M  KR L VKINDYDDP+PN+GHNPFKSKPKKP
Subjt:  MGLRAGRLCLLLLFLVVIVWCLPISGKDDDKMENIATTMVEKRSLIVKINDYDDPTPNQGHNPFKSKPKKP
A0A6J1HP46 uncharacterized protein LOC1114647286.6e-1965.82Show/hide
Query:  MGLRAGRLCLLLLFLVVIVWCLPISGKDDDKMENIATTMVEKRSLIVKINDYDDPTPNQGHNPFKSKPKKPHNDPTRKG
        MGLRAGRLC LLLF+V+IVWCLP+SGK D+ M+   + M+ K+SLI+ INDYDDPT NQ H+PFKSKPK P     RKG
Subjt:  MGLRAGRLCLLLLFLVVIVWCLPISGKDDDKMENIATTMVEKRSLIVKINDYDDPTPNQGHNPFKSKPKKPHNDPTRKG
A0A6J1I305 uncharacterized protein LOC1114694562.1e-1764.56Show/hide
Query:  MGLRAGRLCLLLLFLVVIVWCLPISGKDDDKMENIATTMVEKRSLIVKINDYDDPTPNQGHNPFKSKPKKPHNDPTRKG
        MGLRAGRL  LLLF+V+I WCLP+SGK D+ M+   + M+ KRSLI+ INDYDDPT NQ H+PFKSKPK P     RKG
Subjt:  MGLRAGRLCLLLLFLVVIVWCLPISGKDDDKMENIATTMVEKRSLIVKINDYDDPTPNQGHNPFKSKPKKPHNDPTRKG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATTAAGGGCAGGTCGTTTATGTTTGTTGTTGCTGTTCTTGGTGGTCATAGTATGGTGTTTGCCAATTTCAGGGAAAGATGATGACAAAATGGAGAACATA
GCAACAACCATGGTGGAAAAAAGGTCTTTGATTGTGAAGATCAATGATTATGATGATCCAACACCAAATCAAGGGCATAATCCATTCAAGTCTAAACCAAAAAAG
CCACACAATGATCCTACAAGAAAAGGCTAA
mRNA sequenceShow/hide mRNA sequence
GAGAAAGTGAGAAGAAGAGAGATGGGATTAAGGGCAGGTCGTTTATGTTTGTTGTTGCTGTTCTTGGTGGTCATAGTATGGTGTTTGCCAATTTCAGGGAAAGAT
GATGACAAAATGGAGAACATAGCAACAACCATGGTGGAAAAAAGGTCTTTGATTGTGAAGATCAATGATTATGATGATCCAACACCAAATCAAGGGCATAATCCA
TTCAAGTCTAAACCAAAAAAGCCACACAATGATCCTACAAGAAAAGGCTAAAAAATTCATACTTCTCTTTATTTAGTTTTAATATTCTTAAAAGTTTGTTGGATG
ATAGATTGAAGTTTGAATTTACACTATTTTTCAATTTGGTTCATCGTTAATATTTTGAAAGTTATAGATTTTTCTCTCAAA
Protein sequenceShow/hide protein sequence
MGLRAGRLCLLLLFLVVIVWCLPISGKDDDKMENIATTMVEKRSLIVKINDYDDPTPNQGHNPFKSKPKKPHNDPTRKG