CuGenDBv2

Gene ID	Clc03G00760
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	Embryo defective
Genome location	ClcChr03:687430..690993
RNA-Seq Expression	Clc03G00760
Synteny	Clc03G00760
Gene Ontology terms	NA
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008442875.1 PREDICTED: uncharacterized protein LOC103486641 [Cucumis melo]

1.4e-69

73.6

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Query:  MKARIVLRKVYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNSAKSAPKEKEPSTLEDLD
        MKA+IV RK+YDY+RYDLKEIAFPSSLPDPPHVKKR KLTWH+RFLVLKEASRLYAASWVRDIGP+LRP++YKVEESENKTNS KSAPKEKEPSTLEDL 
Subjt:  MKARIVLRKVYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNSAKSAPKEKEPSTLEDLD

Query:  SALPILPVVIVSLTLVQYLCAKSNKGCSSEKKRREFQTVAARGGMETLKPALQRVYMTRASAYRDALKNFIDGYQEGIQQVMEKKDVSDSQKGSDKI
                                              VAARGGMETLKPALQRVYMTRA+AYRDALK FIDGYQEGIQQVMEKKD SDSQKGSDKI
Subjt:  SALPILPVVIVSLTLVQYLCAKSNKGCSSEKKRREFQTVAARGGMETLKPALQRVYMTRASAYRDALKNFIDGYQEGIQQVMEKKDVSDSQKGSDKI

XP_022144745.1 uncharacterized protein LOC111014361 [Momordica charantia]

3.1e-72

76.65

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Query:  MKARIVLRKVYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNSAKSAPKEKEPSTLEDLD
        MK RIVLRK+YDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTN+AKSA KEKEPSTLEDL 
Subjt:  MKARIVLRKVYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNSAKSAPKEKEPSTLEDLD

Query:  SALPILPVVIVSLTLVQYLCAKSNKGCSSEKKRREFQTVAARGGMETLKPALQRVYMTRASAYRDALKNFIDGYQEGIQQVMEKKDVSDSQKGSDKI
                                              VAARGGMETLKPALQRVYMTRASAYRDALKNFIDGYQEG+QQVMEKK+ SDSQKGSDKI
Subjt:  SALPILPVVIVSLTLVQYLCAKSNKGCSSEKKRREFQTVAARGGMETLKPALQRVYMTRASAYRDALKNFIDGYQEGIQQVMEKKDVSDSQKGSDKI

XP_022934670.1 uncharacterized protein LOC111441792 [Cucurbita moschata]

1.4e-69

73.6

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Query:  MKARIVLRKVYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNSAKSAPKEKEPSTLEDLD
        MKARIVLRK+YDY+RYDLKEIAFPSSLPDPPH KKRRKLTW ERFLVLKEASRLYAASWVRDIGP+LRPNDYKVEESENK NSAKSAPKEKEPSTLEDL 
Subjt:  MKARIVLRKVYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNSAKSAPKEKEPSTLEDLD

Query:  SALPILPVVIVSLTLVQYLCAKSNKGCSSEKKRREFQTVAARGGMETLKPALQRVYMTRASAYRDALKNFIDGYQEGIQQVMEKKDVSDSQKGSDKI
                                              +AARGGMETLKPALQRVYMT+ASAYRDALKNFIDGYQEGIQQVMEKK +SDS+KGS+K+
Subjt:  SALPILPVVIVSLTLVQYLCAKSNKGCSSEKKRREFQTVAARGGMETLKPALQRVYMTRASAYRDALKNFIDGYQEGIQQVMEKKDVSDSQKGSDKI

XP_023522298.1 uncharacterized protein LOC111786187 [Cucurbita pepo subsp. pepo]

1.5e-71

75.13

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Query:  MKARIVLRKVYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNSAKSAPKEKEPSTLEDLD
        MKARIVLRK+YDY+RYDLKEIAFPSSLPDPPH KKRRKLTWHERFLVLKEASRLYAASWVRDIGP+LRPNDYKVEESENK NSAKSAPKEKEPSTLEDL 
Subjt:  MKARIVLRKVYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNSAKSAPKEKEPSTLEDLD

Query:  SALPILPVVIVSLTLVQYLCAKSNKGCSSEKKRREFQTVAARGGMETLKPALQRVYMTRASAYRDALKNFIDGYQEGIQQVMEKKDVSDSQKGSDKI
                                              VAARGGMETLKPALQRVYMT+ASAYRDALKNFIDGYQEGIQQVMEKK++SDSQKGS+K+
Subjt:  SALPILPVVIVSLTLVQYLCAKSNKGCSSEKKRREFQTVAARGGMETLKPALQRVYMTRASAYRDALKNFIDGYQEGIQQVMEKKDVSDSQKGSDKI

XP_038905860.1 uncharacterized protein LOC120091803 [Benincasa hispida]

2.4e-72

77.16

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Query:  MKARIVLRKVYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNSAKSAPKEKEPSTLEDLD
        MK RIVLRKVYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKV+ESENKTNS KSAPKEK PSTLEDL 
Subjt:  MKARIVLRKVYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNSAKSAPKEKEPSTLEDLD

Query:  SALPILPVVIVSLTLVQYLCAKSNKGCSSEKKRREFQTVAARGGMETLKPALQRVYMTRASAYRDALKNFIDGYQEGIQQVMEKKDVSDSQKGSDKI
                                              VAARGGMETLKPALQRVYMTRASAYRDALKNFIDGYQEGIQ V+EKKDVSDSQKGSDKI
Subjt:  SALPILPVVIVSLTLVQYLCAKSNKGCSSEKKRREFQTVAARGGMETLKPALQRVYMTRASAYRDALKNFIDGYQEGIQQVMEKKDVSDSQKGSDKI

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LEN2 Uncharacterized protein

3.9e-68

72.59

Show/hide

Query:  MKARIVLRKVYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNSAKSAPKEKEPSTLEDLD
        MKA+IVLRK+YDY+RYDLKEIAFPSSLPDPPH+KKR KL+W+ERFLVLKEASRLYAASWVRDIGP+LRP DYKV+ESENK NS K APKEKEPSTLEDL 
Subjt:  MKARIVLRKVYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNSAKSAPKEKEPSTLEDLD

Query:  SALPILPVVIVSLTLVQYLCAKSNKGCSSEKKRREFQTVAARGGMETLKPALQRVYMTRASAYRDALKNFIDGYQEGIQQVMEKKDVSDSQKGSDKI
                                              VAARGGMETLKPALQRVYMTRASAYRDALKNFIDGYQEGIQQVMEKK+ SDSQKGSDKI
Subjt:  SALPILPVVIVSLTLVQYLCAKSNKGCSSEKKRREFQTVAARGGMETLKPALQRVYMTRASAYRDALKNFIDGYQEGIQQVMEKKDVSDSQKGSDKI

A0A1S3B6Q8 uncharacterized protein LOC103486641

7.0e-70

73.6

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Query:  MKARIVLRKVYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNSAKSAPKEKEPSTLEDLD
        MKA+IV RK+YDY+RYDLKEIAFPSSLPDPPHVKKR KLTWH+RFLVLKEASRLYAASWVRDIGP+LRP++YKVEESENKTNS KSAPKEKEPSTLEDL 
Subjt:  MKARIVLRKVYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNSAKSAPKEKEPSTLEDLD

Query:  SALPILPVVIVSLTLVQYLCAKSNKGCSSEKKRREFQTVAARGGMETLKPALQRVYMTRASAYRDALKNFIDGYQEGIQQVMEKKDVSDSQKGSDKI
                                              VAARGGMETLKPALQRVYMTRA+AYRDALK FIDGYQEGIQQVMEKKD SDSQKGSDKI
Subjt:  SALPILPVVIVSLTLVQYLCAKSNKGCSSEKKRREFQTVAARGGMETLKPALQRVYMTRASAYRDALKNFIDGYQEGIQQVMEKKDVSDSQKGSDKI

A0A6J1CSI2 uncharacterized protein LOC111014361

1.5e-72

76.65

Show/hide

Query:  MKARIVLRKVYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNSAKSAPKEKEPSTLEDLD
        MK RIVLRK+YDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTN+AKSA KEKEPSTLEDL 
Subjt:  MKARIVLRKVYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNSAKSAPKEKEPSTLEDLD

Query:  SALPILPVVIVSLTLVQYLCAKSNKGCSSEKKRREFQTVAARGGMETLKPALQRVYMTRASAYRDALKNFIDGYQEGIQQVMEKKDVSDSQKGSDKI
                                              VAARGGMETLKPALQRVYMTRASAYRDALKNFIDGYQEG+QQVMEKK+ SDSQKGSDKI
Subjt:  SALPILPVVIVSLTLVQYLCAKSNKGCSSEKKRREFQTVAARGGMETLKPALQRVYMTRASAYRDALKNFIDGYQEGIQQVMEKKDVSDSQKGSDKI

A0A6J1F8D8 uncharacterized protein LOC111441792

7.0e-70

73.6

Show/hide

Query:  MKARIVLRKVYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNSAKSAPKEKEPSTLEDLD
        MKARIVLRK+YDY+RYDLKEIAFPSSLPDPPH KKRRKLTW ERFLVLKEASRLYAASWVRDIGP+LRPNDYKVEESENK NSAKSAPKEKEPSTLEDL 
Subjt:  MKARIVLRKVYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNSAKSAPKEKEPSTLEDLD

Query:  SALPILPVVIVSLTLVQYLCAKSNKGCSSEKKRREFQTVAARGGMETLKPALQRVYMTRASAYRDALKNFIDGYQEGIQQVMEKKDVSDSQKGSDKI
                                              +AARGGMETLKPALQRVYMT+ASAYRDALKNFIDGYQEGIQQVMEKK +SDS+KGS+K+
Subjt:  SALPILPVVIVSLTLVQYLCAKSNKGCSSEKKRREFQTVAARGGMETLKPALQRVYMTRASAYRDALKNFIDGYQEGIQQVMEKKDVSDSQKGSDKI

A0A6J1J6G3 uncharacterized protein LOC111481775

1.2e-69

73.6

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Query:  MKARIVLRKVYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNSAKSAPKEKEPSTLEDLD
        MKARIVLRK+YDY+RYDLKEIAFPSSLPDPPH KKRRKLTW ERFLVLKEASRLYAASWVRDIGP+LRPNDYKVEESENK NSA+SAPKEKEPSTLEDL 
Subjt:  MKARIVLRKVYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNSAKSAPKEKEPSTLEDLD

Query:  SALPILPVVIVSLTLVQYLCAKSNKGCSSEKKRREFQTVAARGGMETLKPALQRVYMTRASAYRDALKNFIDGYQEGIQQVMEKKDVSDSQKGSDKI
                                              VAARGGMETLKPALQRVYMT+AS YRDALKNFIDGYQEGIQQVMEKK++SDSQKGS+K+
Subjt:  SALPILPVVIVSLTLVQYLCAKSNKGCSSEKKRREFQTVAARGGMETLKPALQRVYMTRASAYRDALKNFIDGYQEGIQQVMEKKDVSDSQKGSDKI

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G06240.1 embryo defective 2735

2.1e-50

57.89

Show/hide

Query:  MKARIVLRKVYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNSAKSAPKEKEPSTLEDLD
        MK ++V RKV DYI YDLKEI  PSSLPDPPHV KRRKLTWHERFLVLKEASRLYAASWVRDIGP+LRPNDYK +        AK A  E EPS LEDL 
Subjt:  MKARIVLRKVYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNSAKSAPKEKEPSTLEDLD

Query:  SALPILPVVIVSLTLVQYLCAKSNKGCSSEKKRREFQTVAARGGMETLKPALQRVYMTRASAYRDALKNFIDGYQEGIQQVMEKKDVSDS
                                              VAARGGMETL+PAL R+YMTRAS Y+DAL +FI GY EG+QQVM+ K  S++
Subjt:  SALPILPVVIVSLTLVQYLCAKSNKGCSSEKKRREFQTVAARGGMETLKPALQRVYMTRASAYRDALKNFIDGYQEGIQQVMEKKDVSDS

Sequences

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CDS sequence

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ATGAAGGCGAGGATCGTTTTGAGGAAGGTTTATGATTATATTCGGTATGATTTGAAGGAAATTGCATTTCCTTCGTCCTTGCCAGATCCTCCGCATGTAAAGAAGCGTCG
GAAGCTTACATGGCATGAACGATTCTTGGTGTTGAAGGAGGCTTCTAGGTTATATGCTGCAAGCTGGGTGAGGGACATTGGTCCCGACCTACGACCAAATGACTATAAGG
TAGAAGAAAGCGAAAACAAAACAAATTCAGCAAAAAGTGCACCTAAAGAGAAAGAACCTTCAACACTTGAGGACCTGGATTCTGCTCTTCCTATTCTGCCTGTGGTAATA
GTATCCCTTACTCTTGTGCAATACCTCTGTGCCAAATCAAACAAGGGGTGTAGCTCAGAAAAGAAAAGACGCGAATTCCAAACTGTGGCTGCAAGAGGAGGAATGGAGAC
ATTAAAACCAGCTTTGCAACGGGTGTATATGACTAGAGCTTCTGCATATAGAGACGCTCTAAAAAATTTTATAGATGGGTATCAAGAAGGTATTCAGCAAGTGATGGAGA
AAAAGGACGTTTCTGATTCCCAAAAGGGAAGCGATAAAATCTAA

mRNA sequence

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Protein sequence

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MKARIVLRKVYDYIRYDLKEIAFPSSLPDPPHVKKRRKLTWHERFLVLKEASRLYAASWVRDIGPDLRPNDYKVEESENKTNSAKSAPKEKEPSTLEDLDSALPILPVVI
VSLTLVQYLCAKSNKGCSSEKKRREFQTVAARGGMETLKPALQRVYMTRASAYRDALKNFIDGYQEGIQQVMEKKDVSDSQKGSDKI

Clc03G00760 (gene) of Watermelon (cordophanus) v2 genome