CuGenDBv2

Gene ID	Clc03G01010
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	Maternal effect embryo arrest
Genome location	ClcChr03:908199..909014
RNA-Seq Expression	Clc03G01010
Synteny	Clc03G01010
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0031798.1 uncharacterized protein E6C27_scaffold848G00400 [Cucumis melo var. makuwa]

1.4e-50

93.58

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Query:  MENGRRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYLDKVTGEDDYIPELAEFQRLESDPHERLSYDGRNGKISEEFVETKYYDDL
        MEN RRPGRSDARLSMEEEREMEAKTREYFNGVA KRHTKPQRSEFSAHY+DKV  ED+YIPELAEFQRLESDPHERL+YDGRNGKISEEFVETKYYDDL
Subjt:  MENGRRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYLDKVTGEDDYIPELAEFQRLESDPHERLSYDGRNGKISEEFVETKYYDDL

Query:  NCVDKQHHT
        NCVDKQHHT
Subjt:  NCVDKQHHT

XP_004154227.2 uncharacterized protein LOC101210530 isoform X2 [Cucumis sativus]

1.1e-50

93.58

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Query:  MENGRRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYLDKVTGEDDYIPELAEFQRLESDPHERLSYDGRNGKISEEFVETKYYDDL
        MEN RRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHY+DK   ED+YIPELAEFQRLESDPHERL+YDGRNGKISEEFVETKYYDDL
Subjt:  MENGRRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYLDKVTGEDDYIPELAEFQRLESDPHERLSYDGRNGKISEEFVETKYYDDL

Query:  NCVDKQHHT
        NCVDKQHHT
Subjt:  NCVDKQHHT

XP_011658480.2 uncharacterized protein LOC101210530 isoform X4 [Cucumis sativus]

1.1e-50

93.58

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Query:  MENGRRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYLDKVTGEDDYIPELAEFQRLESDPHERLSYDGRNGKISEEFVETKYYDDL
        MEN RRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHY+DK   ED+YIPELAEFQRLESDPHERL+YDGRNGKISEEFVETKYYDDL
Subjt:  MENGRRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYLDKVTGEDDYIPELAEFQRLESDPHERLSYDGRNGKISEEFVETKYYDDL

Query:  NCVDKQHHT
        NCVDKQHHT
Subjt:  NCVDKQHHT

XP_038893549.1 uncharacterized protein LOC120082446 isoform X1 [Benincasa hispida]

8.2e-51

92.66

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Query:  MENGRRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYLDKVTGEDDYIPELAEFQRLESDPHERLSYDGRNGKISEEFVETKYYDDL
        MENGRRPGRSDARLSMEEEREMEAKTREYFN VAPKRHTKPQRSEFSAHY+DKV G++DYIPELAEFQRLESDPHERL+YD RNGKISEEFVETKYYDDL
Subjt:  MENGRRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYLDKVTGEDDYIPELAEFQRLESDPHERLSYDGRNGKISEEFVETKYYDDL

Query:  NCVDKQHHT
        NC DKQHHT
Subjt:  NCVDKQHHT

XP_038893550.1 uncharacterized protein LOC120082446 isoform X2 [Benincasa hispida]

8.2e-51

92.66

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Query:  MENGRRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYLDKVTGEDDYIPELAEFQRLESDPHERLSYDGRNGKISEEFVETKYYDDL
        MENGRRPGRSDARLSMEEEREMEAKTREYFN VAPKRHTKPQRSEFSAHY+DKV G++DYIPELAEFQRLESDPHERL+YD RNGKISEEFVETKYYDDL
Subjt:  MENGRRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYLDKVTGEDDYIPELAEFQRLESDPHERLSYDGRNGKISEEFVETKYYDDL

Query:  NCVDKQHHT
        NC DKQHHT
Subjt:  NCVDKQHHT

TrEMBL top hits

e value

%identity

Alignment

A0A0A0M0Q2 Uncharacterized protein

5.2e-51

93.58

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Query:  MENGRRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYLDKVTGEDDYIPELAEFQRLESDPHERLSYDGRNGKISEEFVETKYYDDL
        MEN RRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHY+DK   ED+YIPELAEFQRLESDPHERL+YDGRNGKISEEFVETKYYDDL
Subjt:  MENGRRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYLDKVTGEDDYIPELAEFQRLESDPHERLSYDGRNGKISEEFVETKYYDDL

Query:  NCVDKQHHT
        NCVDKQHHT
Subjt:  NCVDKQHHT

A0A1S3C5E6 uncharacterized protein LOC103497099 isoform X2

2.0e-50

92.66

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Query:  MENGRRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYLDKVTGEDDYIPELAEFQRLESDPHERLSYDGRNGKISEEFVETKYYDDL
        MEN RRPGRSDARLSMEEEREMEAKTREYFNGVA KRHTKPQRSEFSAHY+DKV  ED+YIPELA+FQRLESDPHERL+YDGRNGKISEEFVETKYYDDL
Subjt:  MENGRRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYLDKVTGEDDYIPELAEFQRLESDPHERLSYDGRNGKISEEFVETKYYDDL

Query:  NCVDKQHHT
        NCVDKQHHT
Subjt:  NCVDKQHHT

A0A1S3C6Q6 uncharacterized protein LOC103497099 isoform X4

2.0e-50

92.66

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Query:  MENGRRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYLDKVTGEDDYIPELAEFQRLESDPHERLSYDGRNGKISEEFVETKYYDDL
        MEN RRPGRSDARLSMEEEREMEAKTREYFNGVA KRHTKPQRSEFSAHY+DKV  ED+YIPELA+FQRLESDPHERL+YDGRNGKISEEFVETKYYDDL
Subjt:  MENGRRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYLDKVTGEDDYIPELAEFQRLESDPHERLSYDGRNGKISEEFVETKYYDDL

Query:  NCVDKQHHT
        NCVDKQHHT
Subjt:  NCVDKQHHT

A0A5A7SMD8 Uncharacterized protein

6.7e-51

93.58

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Query:  MENGRRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYLDKVTGEDDYIPELAEFQRLESDPHERLSYDGRNGKISEEFVETKYYDDL
        MEN RRPGRSDARLSMEEEREMEAKTREYFNGVA KRHTKPQRSEFSAHY+DKV  ED+YIPELAEFQRLESDPHERL+YDGRNGKISEEFVETKYYDDL
Subjt:  MENGRRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYLDKVTGEDDYIPELAEFQRLESDPHERLSYDGRNGKISEEFVETKYYDDL

Query:  NCVDKQHHT
        NCVDKQHHT
Subjt:  NCVDKQHHT

A0A5D3BE87 Uncharacterized protein

2.0e-50

92.66

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Query:  MENGRRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYLDKVTGEDDYIPELAEFQRLESDPHERLSYDGRNGKISEEFVETKYYDDL
        MEN RRPGRSDARLSMEEEREMEAKTREYFNGVA KRHTKPQRSEFSAHY+DKV  ED+YIPELA+FQRLESDPHERL+YDGRNGKISEEFVETKYYDDL
Subjt:  MENGRRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYLDKVTGEDDYIPELAEFQRLESDPHERLSYDGRNGKISEEFVETKYYDDL

Query:  NCVDKQHHT
        NCVDKQHHT
Subjt:  NCVDKQHHT

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G37300.1 maternal effect embryo arrest 59

3.2e-13

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Query:  RPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSE------FSAHYLDKVTGEDDYIPELAEFQRLESDPHERLSYDGRNGKISEEFVETKYYDD
        +P RSD     E++ +   + R  F+ +APKR TKP RSE      FSA   DK+T      PE  +FQ L+S  H ++  +G +  + +EF+ET+YY +
Subjt:  RPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSE------FSAHYLDKVTGEDDYIPELAEFQRLESDPHERLSYDGRNGKISEEFVETKYYDD

Query:  LNCVDKQHHT
        L  +DKQHHT
Subjt:  LNCVDKQHHT

Sequences

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CDS sequence

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ATGGAGAACGGAAGAAGGCCTGGAAGGAGTGACGCTCGTCTATCCATGGAGGAAGAAAGAGAAATGGAGGCCAAAACTCGAGAGTACTTCAATGGCGTCGCACCG
AAGCGCCACACTAAGCCTCAGCGCAGCGAGTTCTCTGCTCATTACCTTGACAAGGTAACTGGCGAGGACGATTACATTCCTGAACTCGCCGAGTTTCAGCGCCTT
GAATCTGATCCTCACGAGAGACTTAGTTATGATGGCCGTAACGGCAAGATCTCTGAGGAATTTGTGGAGACGAAGTATTACGACGATCTCAATTGTGTAGACAAA
CAGCACCACACGGTAACTCTCTACTCCATCGATCAATCGATCAGGCTGATCTGTTCGCTAACGAAGAAGTTGAATTTTGATCTCAGACAGGAACAGGATTCATCA
AAATGGAGAATGGAGATTGCAAAAGCTTCAGACTCGCAGCAGATTCTACAACTGCCGATTGCTGCCATGGCTCTTGTAGGGGTAATCCGGCGACGAACGACTGGA
TTCCGGCCAGTAATAATCTGGTAA

mRNA sequence

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ACTACTACAACAATAAATAAATCTACTGAACCACAAAGACGATCGAAAAAGCAAATTCAGAGAATCAACAGCAATGGAGAACGGAAGAAGGCCTGGAAGGAGTGA
CGCTCGTCTATCCATGGAGGAAGAAAGAGAAATGGAGGCCAAAACTCGAGAGTACTTCAATGGCGTCGCACCGAAGCGCCACACTAAGCCTCAGCGCAGCGAGTT
CTCTGCTCATTACCTTGACAAGGTAACTGGCGAGGACGATTACATTCCTGAACTCGCCGAGTTTCAGCGCCTTGAATCTGATCCTCACGAGAGACTTAGTTATGA
TGGCCGTAACGGCAAGATCTCTGAGGAATTTGTGGAGACGAAGTATTACGACGATCTCAATTGTGTAGACAAACAGCACCACACGGTAACTCTCTACTCCATCGA
TCAATCGATCAGGCTGATCTGTTCGCTAACGAAGAAGTTGAATTTTGATCTCAGACAGGAACAGGATTCATCAAAATGGAGAATGGAGATTGCAAAAGCTTCAGA
CTCGCAGCAGATTCTACAACTGCCGATTGCTGCCATGGCTCTTGTAGGGGTAATCCGGCGACGAACGACTGGATTCCGGCCAGTAATAATCTGGTAA

Protein sequence

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MENGRRPGRSDARLSMEEEREMEAKTREYFNGVAPKRHTKPQRSEFSAHYLDKVTGEDDYIPELAEFQRLESDPHERLSYDGRNGKISEEFVETKYYDDLNCVDK
QHHTVTLYSIDQSIRLICSLTKKLNFDLRQEQDSSKWRMEIAKASDSQQILQLPIAAMALVGVIRRRTTGFRPVIIW

Clc03G01010 (gene) of Watermelon (cordophanus) v2 genome