; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc03G01630 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc03G01630
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionRING-H2 finger protein ATL14-like
Genome locationClcChr03:1404776..1405581
RNA-Seq ExpressionClc03G01630
SyntenyClc03G01630
Gene Ontology termsNA
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067736.1 RING-H2 finger protein ATL52-like [Cucumis melo var. makuwa]8.3e-1841.06Show/hide
Query:  GLMLVAVICGLMISFMFIFHYYYHQRLRVVEE---DTESR-----------QVSGGVVGVGARQET--------AEEIPVAAMMGFREIKTEEIGD---C
        G + V+V+C ++I F+F   + YH RLR+ +    D E R           Q    +  +  RQ T         EE   A M    ++K  E G    C
Subjt:  GLMLVAVICGLMISFMFIFHYYYHQRLRVVEE---DTESR-----------QVSGGVVGVGARQET--------AEEIPVAAMMGFREIKTEEIGD---C

Query:  DGRRCAICIEGFGEEEICGVIENCGHLFHKDCINRWLRIENRCPLCRCFVH
            CAICIE F +EEICGV+E+CGH FH+DC+++WLRIE+RCPLCRC VH
Subjt:  DGRRCAICIEGFGEEEICGVIENCGHLFHKDCINRWLRIENRCPLCRCFVH

TYJ97407.1 RING-H2 finger protein ATL52-like [Cucumis melo var. makuwa]8.3e-1841.06Show/hide
Query:  GLMLVAVICGLMISFMFIFHYYYHQRLRVVEE---DTESR-----------QVSGGVVGVGARQET--------AEEIPVAAMMGFREIKTEEIGD---C
        G + V+V+C ++I F+F   + YH RLR+ +    D E R           Q    +  +  RQ T         EE   A M    ++K  E G    C
Subjt:  GLMLVAVICGLMISFMFIFHYYYHQRLRVVEE---DTESR-----------QVSGGVVGVGARQET--------AEEIPVAAMMGFREIKTEEIGD---C

Query:  DGRRCAICIEGFGEEEICGVIENCGHLFHKDCINRWLRIENRCPLCRCFVH
            CAICIE F +EEICGV+E+CGH FH+DC+++WLRIE+RCPLCRC VH
Subjt:  DGRRCAICIEGFGEEEICGVIENCGHLFHKDCINRWLRIENRCPLCRCFVH

XP_022158249.1 E3 ubiquitin-protein ligase RING1-like [Momordica charantia]1.7e-1839.76Show/hide
Query:  PNPPPPIHPIRFHLTTRLTIAS--------GLMLVAVICGLMISFMFIFHYYYHQRLRV----VEEDTESR----QVSGGVVGVGARQETA---EEIPVA
        P  PPP   +++ L   + I          G   V  IC  +I   FI  Y YH+R+ +    V +D ESR    +V   V+   ARQ+ +   + +  A
Subjt:  PNPPPPIHPIRFHLTTRLTIAS--------GLMLVAVICGLMISFMFIFHYYYHQRLRV----VEEDTESR----QVSGGVVGVGARQETA---EEIPVA

Query:  AMMGFREIKTEEIGDCDGRRCAICIEGFGEEEICGVIENCGHLFHKDCINRWLRIENRCPLCRCFV
        +      I+ EEI D D R CAIC EGF E+++C VIE CGH FHKDC+++WL +E  CPLCRCFV
Subjt:  AMMGFREIKTEEIGDCDGRRCAICIEGFGEEEICGVIENCGHLFHKDCINRWLRIENRCPLCRCFV

XP_022158253.1 RING-H2 finger protein ATL14-like [Momordica charantia]2.8e-3457.62Show/hide
Query:  PNPPP----PIHPIRFHLTTRLTIASGLMLVAVICGLMISFMFIFHYYYHQRLRVVEEDTESRQVSGGVVGVGARQETAEEIPVAAMMGFREIKTEEIGD
        P+PPP     IH   FHLT RL +ASG M VAV+C   IS MF+FHYY   + RV   DTESR          ++ +TAE+IP +A + +R    EEI D
Subjt:  PNPPP----PIHPIRFHLTTRLTIASGLMLVAVICGLMISFMFIFHYYYHQRLRVVEEDTESRQVSGGVVGVGARQETAEEIPVAAMMGFREIKTEEIGD

Query:  CDGRRCAICIEGFGEEEICGVIENCGHLFHKDCINRWLRIENRCPLCRCFV
        C G RCAICIEGF EEE CGVIENCGH FHKDCI+RWL+IE+RCPLCRC +
Subjt:  CDGRRCAICIEGFGEEEICGVIENCGHLFHKDCINRWLRIENRCPLCRCFV

XP_031742489.1 RING-H2 finger protein ATL1-like [Cucumis sativus]2.9e-6378.53Show/hide
Query:  MSSPSPLPLPESTRRPN-PPPPIHPIRFHLTTRLTIASGLMLVAVICGLMISFMFIFHYYYHQRLRVVEEDTESRQVSGGVVGVGARQETAEEIPVAAMM
        MSSPSP P+PEST RP  PP PIH  +FHLTTRLTIASGLMLVAVIC LMI FMFIFHY YHQRL VV  D ES QVSG      A +ET+EEIP +  M
Subjt:  MSSPSPLPLPESTRRPN-PPPPIHPIRFHLTTRLTIASGLMLVAVICGLMISFMFIFHYYYHQRLRVVEEDTESRQVSGGVVGVGARQETAEEIPVAAMM

Query:  GFREIKTEEIGDCDGRRCAICIEGFGEEEICGVIENCGHLFHKDCINRWLRIENRCPLCRCFV
        GFREIKT EIGDCDGR+CAICIEGFGEEEICGVIENCGH FH+DCINRWLRIE RCPLCRCFV
Subjt:  GFREIKTEEIGDCDGRRCAICIEGFGEEEICGVIENCGHLFHKDCINRWLRIENRCPLCRCFV

TrEMBL top hitse value%identityAlignment
A0A5A7VMH1 RING-H2 finger protein ATL52-like4.0e-1841.06Show/hide
Query:  GLMLVAVICGLMISFMFIFHYYYHQRLRVVEE---DTESR-----------QVSGGVVGVGARQET--------AEEIPVAAMMGFREIKTEEIGD---C
        G + V+V+C ++I F+F   + YH RLR+ +    D E R           Q    +  +  RQ T         EE   A M    ++K  E G    C
Subjt:  GLMLVAVICGLMISFMFIFHYYYHQRLRVVEE---DTESR-----------QVSGGVVGVGARQET--------AEEIPVAAMMGFREIKTEEIGD---C

Query:  DGRRCAICIEGFGEEEICGVIENCGHLFHKDCINRWLRIENRCPLCRCFVH
            CAICIE F +EEICGV+E+CGH FH+DC+++WLRIE+RCPLCRC VH
Subjt:  DGRRCAICIEGFGEEEICGVIENCGHLFHKDCINRWLRIENRCPLCRCFVH

A0A5D3BE50 RING-type E3 ubiquitin transferase4.0e-1841.06Show/hide
Query:  GLMLVAVICGLMISFMFIFHYYYHQRLRVVEE---DTESR-----------QVSGGVVGVGARQET--------AEEIPVAAMMGFREIKTEEIGD---C
        G + V+V+C ++I F+F   + YH RLR+ +    D E R           Q    +  +  RQ T         EE   A M    ++K  E G    C
Subjt:  GLMLVAVICGLMISFMFIFHYYYHQRLRVVEE---DTESR-----------QVSGGVVGVGARQET--------AEEIPVAAMMGFREIKTEEIGD---C

Query:  DGRRCAICIEGFGEEEICGVIENCGHLFHKDCINRWLRIENRCPLCRCFVH
            CAICIE F +EEICGV+E+CGH FH+DC+++WLRIE+RCPLCRC VH
Subjt:  DGRRCAICIEGFGEEEICGVIENCGHLFHKDCINRWLRIENRCPLCRCFVH

A0A6J1DVK4 RING-H2 finger protein ATL14-like1.4e-3457.62Show/hide
Query:  PNPPP----PIHPIRFHLTTRLTIASGLMLVAVICGLMISFMFIFHYYYHQRLRVVEEDTESRQVSGGVVGVGARQETAEEIPVAAMMGFREIKTEEIGD
        P+PPP     IH   FHLT RL +ASG M VAV+C   IS MF+FHYY   + RV   DTESR          ++ +TAE+IP +A + +R    EEI D
Subjt:  PNPPP----PIHPIRFHLTTRLTIASGLMLVAVICGLMISFMFIFHYYYHQRLRVVEEDTESRQVSGGVVGVGARQETAEEIPVAAMMGFREIKTEEIGD

Query:  CDGRRCAICIEGFGEEEICGVIENCGHLFHKDCINRWLRIENRCPLCRCFV
        C G RCAICIEGF EEE CGVIENCGH FHKDCI+RWL+IE+RCPLCRC +
Subjt:  CDGRRCAICIEGFGEEEICGVIENCGHLFHKDCINRWLRIENRCPLCRCFV

A0A6J1DYV0 E3 ubiquitin-protein ligase RING1-like8.1e-1939.76Show/hide
Query:  PNPPPPIHPIRFHLTTRLTIAS--------GLMLVAVICGLMISFMFIFHYYYHQRLRV----VEEDTESR----QVSGGVVGVGARQETA---EEIPVA
        P  PPP   +++ L   + I          G   V  IC  +I   FI  Y YH+R+ +    V +D ESR    +V   V+   ARQ+ +   + +  A
Subjt:  PNPPPPIHPIRFHLTTRLTIAS--------GLMLVAVICGLMISFMFIFHYYYHQRLRV----VEEDTESR----QVSGGVVGVGARQETA---EEIPVA

Query:  AMMGFREIKTEEIGDCDGRRCAICIEGFGEEEICGVIENCGHLFHKDCINRWLRIENRCPLCRCFV
        +      I+ EEI D D R CAIC EGF E+++C VIE CGH FHKDC+++WL +E  CPLCRCFV
Subjt:  AMMGFREIKTEEIGDCDGRRCAICIEGFGEEEICGVIENCGHLFHKDCINRWLRIENRCPLCRCFV

A0A6J1HJU0 RING-type E3 ubiquitin transferase1.2e-1740.28Show/hide
Query:  GLMLVAVICGLMISFMFIFHYY------YHQRLRVVEED-----------TESRQVSGGVVGVGARQETAEE--IPVAAMMGFREIKTEEIGDCDGRRCA
        GL++++ I  ++   +F+F  Y      Y  R   VE+             E  Q    +     R  TAEE    +   + +R+IKT E  D D   CA
Subjt:  GLMLVAVICGLMISFMFIFHYY------YHQRLRVVEED-----------TESRQVSGGVVGVGARQETAEE--IPVAAMMGFREIKTEEIGDCDGRRCA

Query:  ICIEGFGEEEICGVIENCGHLFHKDCINRWLRIENRCPLCRCFV
        ICIEGF EEEICGV++ CGH FHK CI++WLRI +RCPLCRC +
Subjt:  ICIEGFGEEEICGVIENCGHLFHKDCINRWLRIENRCPLCRCFV

SwissProt top hitse value%identityAlignment
P93823 RING-H2 finger protein ATL17.3e-0929.88Show/hide
Query:  PNPPPPIHPIRFHLTTRLTIASG----LMLVAVICGLMISFMFIFHYYY--------HQ-----RLRVVEEDTESRQVSGGVVGVGARQETAEEIPVAAM
        P PPPP       +  R T +SG    ++ +AVI  L  +F+ + +Y +        HQ     R R   +       S   V  G  +     IPV   
Subjt:  PNPPPPIHPIRFHLTTRLTIASG----LMLVAVICGLMISFMFIFHYYY--------HQ-----RLRVVEEDTESRQVSGGVVGVGARQETAEEIPVAAM

Query:  MGFREIKTEEIGDCDGRRCAICIEGFGEEEICGVIENCGHLFHKDCINRWLRIENRCPLCRCFV
             +  EE    + + C++C+  F E+E   +I NC H+FH DCI+ WL+    CPLCR  V
Subjt:  MGFREIKTEEIGDCDGRRCAICIEGFGEEEICGVIENCGHLFHKDCINRWLRIENRCPLCRCFV

Q8LGA5 E3 ubiquitin-protein ligase ATL311.2e-0830.38Show/hide
Query:  LPLPESTRRPNPPPPIHPIRFHLTTRLTIASGLMLVAVICGLMISFMFIFHYYYHQRLRVVEEDT-----ESRQVSGGVVGVGARQETAEEIPVAAMMGF
        L L  S  +P  P   H   +  +  L+ A  +++V VI  L   FM  F  Y       V+          R+V+   V  G   ET E  P      +
Subjt:  LPLPESTRRPNPPPPIHPIRFHLTTRLTIASGLMLVAVICGLMISFMFIFHYYYHQRLRVVEEDT-----ESRQVSGGVVGVGARQETAEEIPVAAMMGF

Query:  REIKTEEIGDCDGRRCAICIEGFGEEEICGVIENCGHLFHKDCINRWLRIENRCPLCR
         E+KT++IG      CAIC+  F ++E   ++  C H+FH  CI  WL+    CP+CR
Subjt:  REIKTEEIGDCDGRRCAICIEGFGEEEICGVIENCGHLFHKDCINRWLRIENRCPLCR

Q9LRB7 E3 ubiquitin-protein ligase EL52.1e-0828.57Show/hide
Query:  LPESTRRPNPPPPIHPIRFHLTTRLTIASGLMLVAVICGLMISFMFIFHYYYHQRLRVVEEDTES-------RQVSG----GVVGVGARQETAEEIPV--
        + ES+   +P P   P      T   IA+   ++ V   L ++F+ +  Y   +R  V    T         R+ SG    G  G G   E    +PV  
Subjt:  LPESTRRPNPPPPIHPIRFHLTTRLTIASGLMLVAVICGLMISFMFIFHYYYHQRLRVVEEDTES-------RQVSG----GVVGVGARQETAEEIPV--

Query:  -AAMMGFREIKTEEIGDCDGRRCAICIEGFGEEEICGVIENCGHLFHKDCINRWLRIENRCPLCRCFV
         +        K EE  D DG  CA+C+    + E    +  CGH FH +C++ WL   + CPLCR  V
Subjt:  -AAMMGFREIKTEEIGDCDGRRCAICIEGFGEEEICGVIENCGHLFHKDCINRWLRIENRCPLCRCFV

Q9LSW9 RING-H2 finger protein ATL167.3e-0928.41Show/hide
Query:  PLPESTRRPNPPPPIHPIRFHLTTRLTIASGLMLVAVICGLMISFMFIFHYYY-------HQRLRVVEEDTESRQVSGG-----VVGVGARQETAEEIPV
        PL + +  P PPPPI    FH  +    +  ++ VAVI  L  +F+ + +Y +         R+ ++   + SR+         V     R    +E  +
Subjt:  PLPESTRRPNPPPPIHPIRFHLTTRLTIASGLMLVAVICGLMISFMFIFHYYY-------HQRLRVVEEDTESRQVSGG-----VVGVGARQETAEEIPV

Query:  AAMMGFREIKT------------EEIGDCDGRRCAICIEGFGEEEICGVIENCGHLFHKDCINRWLRIENRCPLCR
         A+  F+  K             EE  +   + C++C+  F +EE   +I NC HLFH DCI+ WL+    CPLCR
Subjt:  AAMMGFREIKT------------EEIGDCDGRRCAICIEGFGEEEICGVIENCGHLFHKDCINRWLRIENRCPLCR

Q9LX93 E3 ubiquitin-protein ligase RING12.5e-0927.33Show/hide
Query:  PNPPPPIHPIRFHLTTRLTIASGLMLVAVICGLMISFMFIFHYYYHQRLRVV------------EEDTESRQVSG-----GVVGVGARQETAEEIPVAAM
        P PPPP   +   L T + +   ++L      L + F    H    +R+               E++TE R  S       +  VG  +     I V   
Subjt:  PNPPPPIHPIRFHLTTRLTIASGLMLVAVICGLMISFMFIFHYYYHQRLRVV------------EEDTESRQVSG-----GVVGVGARQETAEEIPVAAM

Query:  MGFREIKTEEIGDCDGRRCAICIEGFGEEEICGVIENCGHLFHKDCINRWLRIENRCPLCR
        +GF++ +    G  DG  C++C+  F E+E   ++  C H FH +CI+ WL     CPLCR
Subjt:  MGFREIKTEEIGDCDGRRCAICIEGFGEEEICGVIENCGHLFHKDCINRWLRIENRCPLCR

Arabidopsis top hitse value%identityAlignment
AT1G04360.1 RING/U-box superfamily protein5.2e-1029.88Show/hide
Query:  PNPPPPIHPIRFHLTTRLTIASG----LMLVAVICGLMISFMFIFHYYY--------HQ-----RLRVVEEDTESRQVSGGVVGVGARQETAEEIPVAAM
        P PPPP       +  R T +SG    ++ +AVI  L  +F+ + +Y +        HQ     R R   +       S   V  G  +     IPV   
Subjt:  PNPPPPIHPIRFHLTTRLTIASG----LMLVAVICGLMISFMFIFHYYY--------HQ-----RLRVVEEDTESRQVSGGVVGVGARQETAEEIPVAAM

Query:  MGFREIKTEEIGDCDGRRCAICIEGFGEEEICGVIENCGHLFHKDCINRWLRIENRCPLCRCFV
             +  EE    + + C++C+  F E+E   +I NC H+FH DCI+ WL+    CPLCR  V
Subjt:  MGFREIKTEEIGDCDGRRCAICIEGFGEEEICGVIENCGHLFHKDCINRWLRIENRCPLCRCFV

AT2G37150.1 RING/U-box superfamily protein2.3e-1041.27Show/hide
Query:  AMMGFREIKTEEIGDCDGRRCAICIEGFGEEEICGVIENCGHLFHKDCINRWLRIENRCPLCR
        A M +   +TEE      R+CAIC+E + E+E  G ++ CGH +H  CI +WL ++N CP+C+
Subjt:  AMMGFREIKTEEIGDCDGRRCAICIEGFGEEEICGVIENCGHLFHKDCINRWLRIENRCPLCR

AT2G37150.2 RING/U-box superfamily protein2.3e-1041.27Show/hide
Query:  AMMGFREIKTEEIGDCDGRRCAICIEGFGEEEICGVIENCGHLFHKDCINRWLRIENRCPLCR
        A M +   +TEE      R+CAIC+E + E+E  G ++ CGH +H  CI +WL ++N CP+C+
Subjt:  AMMGFREIKTEEIGDCDGRRCAICIEGFGEEEICGVIENCGHLFHKDCINRWLRIENRCPLCR

AT2G37150.3 RING/U-box superfamily protein2.3e-1041.27Show/hide
Query:  AMMGFREIKTEEIGDCDGRRCAICIEGFGEEEICGVIENCGHLFHKDCINRWLRIENRCPLCR
        A M +   +TEE      R+CAIC+E + E+E  G ++ CGH +H  CI +WL ++N CP+C+
Subjt:  AMMGFREIKTEEIGDCDGRRCAICIEGFGEEEICGVIENCGHLFHKDCINRWLRIENRCPLCR

AT5G10380.1 RING/U-box superfamily protein1.8e-1027.33Show/hide
Query:  PNPPPPIHPIRFHLTTRLTIASGLMLVAVICGLMISFMFIFHYYYHQRLRVV------------EEDTESRQVSG-----GVVGVGARQETAEEIPVAAM
        P PPPP   +   L T + +   ++L      L + F    H    +R+               E++TE R  S       +  VG  +     I V   
Subjt:  PNPPPPIHPIRFHLTTRLTIASGLMLVAVICGLMISFMFIFHYYYHQRLRVV------------EEDTESRQVSG-----GVVGVGARQETAEEIPVAAM

Query:  MGFREIKTEEIGDCDGRRCAICIEGFGEEEICGVIENCGHLFHKDCINRWLRIENRCPLCR
        +GF++ +    G  DG  C++C+  F E+E   ++  C H FH +CI+ WL     CPLCR
Subjt:  MGFREIKTEEIGDCDGRRCAICIEGFGEEEICGVIENCGHLFHKDCINRWLRIENRCPLCR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCCCCATCTCCTCTGCCGTTGCCGGAATCCACAAGACGGCCAAATCCGCCGCCGCCGATCCATCCCATTAGGTTTCACCTTACGACCAGATTAACAATC
GCAAGCGGCTTAATGTTGGTGGCAGTGATTTGTGGTCTAATGATTTCGTTTATGTTCATTTTTCATTACTATTACCATCAACGCCTCAGAGTAGTGGAGGAGGAC
ACCGAATCAAGGCAAGTATCGGGAGGTGTGGTGGGGGTTGGAGCGCGGCAGGAGACGGCGGAGGAAATTCCGGTGGCCGCGATGATGGGTTTCAGAGAAATAAAA
ACAGAGGAAATTGGGGATTGTGATGGGAGGAGGTGTGCGATATGTATTGAAGGATTTGGGGAGGAAGAGATTTGTGGAGTAATTGAGAATTGCGGACATCTTTTT
CATAAGGATTGTATTAATCGGTGGCTTAGAATTGAGAACCGTTGCCCACTTTGCCGCTGCTTTGTTCATAGGTTTTTGTGA
mRNA sequenceShow/hide mRNA sequence
CTTTTCTAAACTTTTTCCAAACTTCAAAAGTATTCAAATTCCCTGTTTTACGTAAAAAGAACCTAAAAAATCAATCAAACCTTCTTCTTCAAATTCAGCCATGTC
TTCCCCATCTCCTCTGCCGTTGCCGGAATCCACAAGACGGCCAAATCCGCCGCCGCCGATCCATCCCATTAGGTTTCACCTTACGACCAGATTAACAATCGCAAG
CGGCTTAATGTTGGTGGCAGTGATTTGTGGTCTAATGATTTCGTTTATGTTCATTTTTCATTACTATTACCATCAACGCCTCAGAGTAGTGGAGGAGGACACCGA
ATCAAGGCAAGTATCGGGAGGTGTGGTGGGGGTTGGAGCGCGGCAGGAGACGGCGGAGGAAATTCCGGTGGCCGCGATGATGGGTTTCAGAGAAATAAAAACAGA
GGAAATTGGGGATTGTGATGGGAGGAGGTGTGCGATATGTATTGAAGGATTTGGGGAGGAAGAGATTTGTGGAGTAATTGAGAATTGCGGACATCTTTTTCATAA
GGATTGTATTAATCGGTGGCTTAGAATTGAGAACCGTTGCCCACTTTGCCGCTGCTTTGTTCATAGGTTTTTGTGACAATCGGCCTAACACCCAATATCTTTTCT
TTCTCATTCAAACTCCTTCCAGCCTTAGATTCATTCAAATTCAACTCCTTATGTATATAAGTGTGATCTACACTATAGATTTGAAACATCTAACAATAAACATAT
ATTTATATATTTGTATAGTCGGTCACACCCTTTGCTCTATAAATTTTATAAACTCATAACTTGTATTTCTC
Protein sequenceShow/hide protein sequence
MSSPSPLPLPESTRRPNPPPPIHPIRFHLTTRLTIASGLMLVAVICGLMISFMFIFHYYYHQRLRVVEEDTESRQVSGGVVGVGARQETAEEIPVAAMMGFREIK
TEEIGDCDGRRCAICIEGFGEEEICGVIENCGHLFHKDCINRWLRIENRCPLCRCFVHRFL