CuGenDBv2

Gene ID	Clc03G04255
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	Chloroplast envelope membrane protein
Genome location	ClcChr03:4199237..4201342
RNA-Seq Expression	Clc03G04255
Synteny	Clc03G04255
Gene Ontology terms	GO:1902600 - proton transmembrane transport (biological process) GO:0009706 - chloroplast inner membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0015078 - proton transmembrane transporter activity (molecular function)
InterPro domains	IPR004282 - Chloroplast envelope membrane protein, CemA

Homology

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GenBank top hits

e value

%identity

Alignment

YP_009172289.1 chloroplast envelope membrane protein [Colobanthus quitensis]

1.2e-08

57.14

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Query:  QISCHMLALAILEDLWLNVRILDNKELVIFKSWVQEFQYKLNDTIKALFILLLIDLCIGFHWP
        Q S +++ L IL   +    I+ NKEL++  SWVQEF Y L+DTIKA FILLL DLCIGFH P
Subjt:  QISCHMLALAILEDLWLNVRILDNKELVIFKSWVQEFQYKLNDTIKALFILLLIDLCIGFHWP

YP_009445772.1 chloroplast envelope membrane protein [Colobanthus apetalus]

1.2e-08

57.14

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Query:  QISCHMLALAILEDLWLNVRILDNKELVIFKSWVQEFQYKLNDTIKALFILLLIDLCIGFHWP
        Q S +++ L IL   +    I+ NKEL++  SWVQEF Y L+DTIKA FILLL DLCIGFH P
Subjt:  QISCHMLALAILEDLWLNVRILDNKELVIFKSWVQEFQYKLNDTIKALFILLLIDLCIGFHWP

YP_010024993.1 chloroplast envelope membrane protein [Colobanthus lycopodioides]

1.2e-08

57.14

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Query:  QISCHMLALAILEDLWLNVRILDNKELVIFKSWVQEFQYKLNDTIKALFILLLIDLCIGFHWP
        Q S +++ L IL   +    I+ NKEL++  SWVQEF Y L+DTIKA FILLL DLCIGFH P
Subjt:  QISCHMLALAILEDLWLNVRILDNKELVIFKSWVQEFQYKLNDTIKALFILLLIDLCIGFHWP

YP_010025159.1 chloroplast envelope membrane protein [Colobanthus subulatus]

1.2e-08

57.14

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Query:  QISCHMLALAILEDLWLNVRILDNKELVIFKSWVQEFQYKLNDTIKALFILLLIDLCIGFHWP
        Q S +++ L IL   +    I+ NKEL++  SWVQEF Y L+DTIKA FILLL DLCIGFH P
Subjt:  QISCHMLALAILEDLWLNVRILDNKELVIFKSWVQEFQYKLNDTIKALFILLLIDLCIGFHWP

YP_010046871.1 chloroplast envelope membrane protein [Coptis japonica]

1.6e-08

60.66

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Query:  SCHMLALAILEDLWLNVRILDNKELVIFKSWVQEFQYKLNDTIKALFILLLIDLCIGFHWP
        S ++++ AIL        IL NKELVI  SWV+EF Y L+DTIKA FILLL DLCIGFH P
Subjt:  SCHMLALAILEDLWLNVRILDNKELVIFKSWVQEFQYKLNDTIKALFILLLIDLCIGFHWP

TrEMBL top hits

e value

%identity

Alignment

A0A0N9H8Z8 envelope membrane protein, chloroplastic

6.0e-09

57.14

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Query:  QISCHMLALAILEDLWLNVRILDNKELVIFKSWVQEFQYKLNDTIKALFILLLIDLCIGFHWP
        Q S +++ L IL   +    I+ NKEL++  SWVQEF Y L+DTIKA FILLL DLCIGFH P
Subjt:  QISCHMLALAILEDLWLNVRILDNKELVIFKSWVQEFQYKLNDTIKALFILLLIDLCIGFHWP

A0A2H4QHL5 envelope membrane protein, chloroplastic

6.0e-09

57.14

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Query:  QISCHMLALAILEDLWLNVRILDNKELVIFKSWVQEFQYKLNDTIKALFILLLIDLCIGFHWP
        Q S +++ L IL   +    I+ NKEL++  SWVQEF Y L+DTIKA FILLL DLCIGFH P
Subjt:  QISCHMLALAILEDLWLNVRILDNKELVIFKSWVQEFQYKLNDTIKALFILLLIDLCIGFHWP

A0A7M1I894 envelope membrane protein, chloroplastic

6.0e-09

57.14

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Query:  QISCHMLALAILEDLWLNVRILDNKELVIFKSWVQEFQYKLNDTIKALFILLLIDLCIGFHWP
        Q S +++ L IL   +    I+ NKEL++  SWVQEF Y L+DTIKA FILLL DLCIGFH P
Subjt:  QISCHMLALAILEDLWLNVRILDNKELVIFKSWVQEFQYKLNDTIKALFILLLIDLCIGFHWP

A0A7M1I8P9 envelope membrane protein, chloroplastic

6.0e-09

57.14

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Query:  QISCHMLALAILEDLWLNVRILDNKELVIFKSWVQEFQYKLNDTIKALFILLLIDLCIGFHWP
        Q S +++ L IL   +    I+ NKEL++  SWVQEF Y L+DTIKA FILLL DLCIGFH P
Subjt:  QISCHMLALAILEDLWLNVRILDNKELVIFKSWVQEFQYKLNDTIKALFILLLIDLCIGFHWP

A0A7M1I8Z0 envelope membrane protein, chloroplastic

6.0e-09

57.14

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Query:  QISCHMLALAILEDLWLNVRILDNKELVIFKSWVQEFQYKLNDTIKALFILLLIDLCIGFHWP
        Q S +++ L IL   +    I+ NKEL++  SWVQEF Y L+DTIKA FILLL DLCIGFH P
Subjt:  QISCHMLALAILEDLWLNVRILDNKELVIFKSWVQEFQYKLNDTIKALFILLLIDLCIGFHWP

SwissProt top hits

e value

%identity

Alignment

A8SEB5 Chloroplast envelope membrane protein

2.4e-10

55.38

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Query:  DNQISCHMLALAILEDLWLNVRILDNKELVIFKSWVQEFQYKLNDTIKALFILLLIDLCIGFHWP
        D QI  H     I   +     I+ N+ELVI  SWVQEF Y L+DTIKA  ILLL DLCIGFH P
Subjt:  DNQISCHMLALAILEDLWLNVRILDNKELVIFKSWVQEFQYKLNDTIKALFILLLIDLCIGFHWP

Q06GY5 Chloroplast envelope membrane protein

1.4e-10

58.06

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Query:  ISCHMLALAILEDLWLNVRILDNKELVIFKSWVQEFQYKLNDTIKALFILLLIDLCIGFHWP
        I  H  A  I   ++    IL N+ELVI  SWVQEF Y L+DTIKA  ILLL DLCIGFH P
Subjt:  ISCHMLALAILEDLWLNVRILDNKELVIFKSWVQEFQYKLNDTIKALFILLLIDLCIGFHWP

Q09FU9 Chloroplast envelope membrane protein

1.8e-10

53.97

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Query:  QISCHMLALAILEDLWLNVRILDNKELVIFKSWVQEFQYKLNDTIKALFILLLIDLCIGFHWP
        Q S ++++ AIL        IL N+ELV+  SW++EF Y L+DTIKA  ILLL DLCIGFH P
Subjt:  QISCHMLALAILEDLWLNVRILDNKELVIFKSWVQEFQYKLNDTIKALFILLLIDLCIGFHWP

Q0G9K7 Chloroplast envelope membrane protein

1.8e-10

59.02

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Query:  SCHMLALAILEDLWLNVRILDNKELVIFKSWVQEFQYKLNDTIKALFILLLIDLCIGFHWP
        S +++  AIL        IL N+ELVI  SWVQEF Y L+DTIKA  ILLL DLCIGFH P
Subjt:  SCHMLALAILEDLWLNVRILDNKELVIFKSWVQEFQYKLNDTIKALFILLLIDLCIGFHWP

Q2QD77 Chloroplast envelope membrane protein

3.1e-10

74.42

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Query:  ILDNKELVIFKSWVQEFQYKLNDTIKALFILLLIDLCIGFHWP
        IL N+ELVI  SWVQEF Y L+DTIKA  ILLL DLCIGFH P
Subjt:  ILDNKELVIFKSWVQEFQYKLNDTIKALFILLLIDLCIGFHWP

Arabidopsis top hits

e value

%identity

Alignment

ATCG00530.1 CemA-like proton extrusion protein-related

5.9e-09

69.23

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Query:  KELVIFKSWVQEFQYKLNDTIKALFILLLIDLCIGFHWP
        ++L I  SWVQEF Y L+DTIKA  ILLL DLCIGFH P
Subjt:  KELVIFKSWVQEFQYKLNDTIKALFILLLIDLCIGFHWP

Sequences

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CDS sequence

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ATGAAAAAGAAAGAGATTTGCGCAGACAACCAAATTTCTTGTCATATGCTGGCTCTTGCAATTCTAGAAGACCTCTGGTTGAATGTTCGAATTCTTGATAACAAA
GAACTTGTTATCTTTAAGTCTTGGGTTCAAGAGTTCCAATATAAATTAAACGACACGATAAAAGCTTTGTTTATTCTTTTATTAATTGATTTATGTATAGGATTC
CATTGGCCCATAGTTGAGAACTAA

mRNA sequence

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Protein sequence

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MKKKEICADNQISCHMLALAILEDLWLNVRILDNKELVIFKSWVQEFQYKLNDTIKALFILLLIDLCIGFHWPIVEN

Clc03G04255 (gene) of Watermelon (cordophanus) v2 genome