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Clc03G04880 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc03G04880
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionglycine-rich protein 5-like
Genome locationClcChr03:4726888..4727656
RNA-Seq ExpressionClc03G04880
SyntenyClc03G04880
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008446362.1 PREDICTED: glycine-rich cell wall structural protein [Cucumis melo]4.8e-3190.08Show/hide
Query:  MGSLAFKILWLVVLCALIWTSETRKLVISNGGEIESEKTVAFQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGVGD
        MGSLAFK LWLVVLCALI  SE R+LVI+NGGEIESEKT+ FQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGG G 
Subjt:  MGSLAFKILWLVVLCALIWTSETRKLVISNGGEIESEKTVAFQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGVGD

Query:  GGALGGGAGGGAGGGFGGGLP
        GG LGGGAGGG GGGFGGGLP
Subjt:  GGALGGGAGGGAGGGFGGGLP

XP_011648421.1 glycine-rich cell wall structural protein [Cucumis sativus]1.1e-3291.74Show/hide
Query:  MGSLAFKILWLVVLCALIWTSETRKLVISNGGEIESEKTVAFQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGVGD
        MGS AFK LWLVVLCALIW SE RKLVI+NGGEIESEKT+ FQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGG G 
Subjt:  MGSLAFKILWLVVLCALIWTSETRKLVISNGGEIESEKTVAFQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGVGD

Query:  GGALGGGAGGGAGGGFGGGLP
        GG LGGGAGGGAGGGFGGGLP
Subjt:  GGALGGGAGGGAGGGFGGGLP

XP_022140151.1 glycine-rich protein 5-like [Momordica charantia]1.8e-2279.67Show/hide
Query:  SLAFKILWLVVLCALIWTSETRKLVISNGGEI----ESEKTVAFQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGV
        +LA K+LWLV+L ALI  SE RK ++ NGG+I    E+EKT+ FQFFPG+GGGLGGGGGFGGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGG 
Subjt:  SLAFKILWLVVLCALIWTSETRKLVISNGGEI----ESEKTVAFQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGV

Query:  GDGGALGGGAGGGAGGGFGGGLP
        G GG LGGGAGGG+GGGFGGGLP
Subjt:  GDGGALGGGAGGGAGGGFGGGLP

XP_022994117.1 glycine-rich protein 5 [Cucurbita maxima]1.4e-1979.84Show/hide
Query:  MGS-LAFKILWLVVLCALIWTSETRKLVISNGGEIESEKTVAFQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGVG
        MGS LA K LWL+VL ALI  SE R+LV   GG   SEKT  FQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGG GFGSGIGGLG GGGGGFGG G
Subjt:  MGS-LAFKILWLVVLCALIWTSETRKLVISNGGEIESEKTVAFQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGVG

Query:  DGGA--LGGGAGGGAGGGFGGGLP
          G+  LGGGAGGGAGGGFGGGLP
Subjt:  DGGA--LGGGAGGGAGGGFGGGLP

XP_038895952.1 glycine-rich cell wall structural protein-like [Benincasa hispida]7.4e-3290.24Show/hide
Query:  MGSLAFKILWLVVLCALIWTSETRKLVISNGGEIESEKTVAFQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGVGD
        MGSLAFK LWLVVLCALIW SE RKLVI+NGGEIESEKT+AFQFFPG+GGGLGGGGG+GGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGG G 
Subjt:  MGSLAFKILWLVVLCALIWTSETRKLVISNGGEIESEKTVAFQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGVGD

Query:  GGA--LGGGAGGGAGGGFGGGLP
        GG   LGGGAGGGAGGGFGGGLP
Subjt:  GGA--LGGGAGGGAGGGFGGGLP

TrEMBL top hitse value%identityAlignment
A0A0A0LS00 Uncharacterized protein5.5e-3391.74Show/hide
Query:  MGSLAFKILWLVVLCALIWTSETRKLVISNGGEIESEKTVAFQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGVGD
        MGS AFK LWLVVLCALIW SE RKLVI+NGGEIESEKT+ FQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGG G 
Subjt:  MGSLAFKILWLVVLCALIWTSETRKLVISNGGEIESEKTVAFQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGVGD

Query:  GGALGGGAGGGAGGGFGGGLP
        GG LGGGAGGGAGGGFGGGLP
Subjt:  GGALGGGAGGGAGGGFGGGLP

A0A1S3BEW4 glycine-rich cell wall structural protein2.3e-3190.08Show/hide
Query:  MGSLAFKILWLVVLCALIWTSETRKLVISNGGEIESEKTVAFQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGVGD
        MGSLAFK LWLVVLCALI  SE R+LVI+NGGEIESEKT+ FQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGG G 
Subjt:  MGSLAFKILWLVVLCALIWTSETRKLVISNGGEIESEKTVAFQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGVGD

Query:  GGALGGGAGGGAGGGFGGGLP
        GG LGGGAGGG GGGFGGGLP
Subjt:  GGALGGGAGGGAGGGFGGGLP

A0A5D3BMG3 Glycine-rich cell wall structural protein2.3e-3190.08Show/hide
Query:  MGSLAFKILWLVVLCALIWTSETRKLVISNGGEIESEKTVAFQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGVGD
        MGSLAFK LWLVVLCALI  SE R+LVI+NGGEIESEKT+ FQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGG G 
Subjt:  MGSLAFKILWLVVLCALIWTSETRKLVISNGGEIESEKTVAFQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGVGD

Query:  GGALGGGAGGGAGGGFGGGLP
        GG LGGGAGGG GGGFGGGLP
Subjt:  GGALGGGAGGGAGGGFGGGLP

A0A6J1CF04 glycine-rich protein 5-like8.8e-2379.67Show/hide
Query:  SLAFKILWLVVLCALIWTSETRKLVISNGGEI----ESEKTVAFQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGV
        +LA K+LWLV+L ALI  SE RK ++ NGG+I    E+EKT+ FQFFPG+GGGLGGGGGFGGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGG 
Subjt:  SLAFKILWLVVLCALIWTSETRKLVISNGGEI----ESEKTVAFQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGV

Query:  GDGGALGGGAGGGAGGGFGGGLP
        G GG LGGGAGGG+GGGFGGGLP
Subjt:  GDGGALGGGAGGGAGGGFGGGLP

E5GC63 Uncharacterized protein2.3e-3190.08Show/hide
Query:  MGSLAFKILWLVVLCALIWTSETRKLVISNGGEIESEKTVAFQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGVGD
        MGSLAFK LWLVVLCALI  SE R+LVI+NGGEIESEKT+ FQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGG G 
Subjt:  MGSLAFKILWLVVLCALIWTSETRKLVISNGGEIESEKTVAFQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGVGD

Query:  GGALGGGAGGGAGGGFGGGLP
        GG LGGGAGGG GGGFGGGLP
Subjt:  GGALGGGAGGGAGGGFGGGLP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTCTTTGGCTTTCAAAATTCTCTGGCTGGTGGTTCTGTGTGCACTAATTTGGACTTCAGAGACCAGAAAACTTGTAATTAGCAATGGGGGAGAGATTGAGAGTGA
AAAGACAGTGGCCTTCCAGTTCTTTCCTGGATACGGCGGCGGACTCGGCGGTGGCGGAGGGTTTGGTGGTGGTGGCGGTGGCGGGTTAGGTGGTGGTTCGGGCTTTGGCA
GTGGAGGTGGAGGGGGTTTTGGGTCTGGCATTGGGGGACTAGGCAGTGGTGGCGGCGGAGGGTTTGGCGGTGTTGGTGACGGTGGCGCTTTAGGTGGCGGAGCTGGCGGA
GGAGCTGGTGGTGGATTTGGAGGTGGACTTCCTTGA
mRNA sequenceShow/hide mRNA sequence
GGGAAGTCTCAACTAAAAGGCAGATTGGAATCTGTATAAACTGCCCAGCCACGGATAATTGATGATATCTTGACAAAAAATTTATGTCATCTAAGCCTTTTTTTACCCCT
TTTTTCACTTCGTAAACTTCTATAAATTCCTACACTCAAAACTCCCAATTCCCATCAAACAAACTATCACTCTTTTTCTTAAAAGAATTATGGGTTCTTTGGCTTTCAAA
ATTCTCTGGCTGGTGGTTCTGTGTGCACTAATTTGGACTTCAGAGACCAGAAAACTTGTAATTAGCAATGGGGGAGAGATTGAGAGTGAAAAGACAGTGGCCTTCCAGTT
CTTTCCTGGATACGGCGGCGGACTCGGCGGTGGCGGAGGGTTTGGTGGTGGTGGCGGTGGCGGGTTAGGTGGTGGTTCGGGCTTTGGCAGTGGAGGTGGAGGGGGTTTTG
GGTCTGGCATTGGGGGACTAGGCAGTGGTGGCGGCGGAGGGTTTGGCGGTGTTGGTGACGGTGGCGCTTTAGGTGGCGGAGCTGGCGGAGGAGCTGGTGGTGGATTTGGA
GGTGGACTTCCTTGAGTTCAAAATTGTGTTTGGTTTCATGAGATATTACTATTTGAGGGCTTCACTGAGTGTCATTGTATGTTGAAGTGTTTGTTTGTTTGTTGTGTGAT
TTCATGTTATAAAGTTTAAAGAATTTGGTTTTTATTATAAACTATGTCAGAGAGAGCAAGATCTCTTTTAAATGTGTGAATGGACATATATGTTCAGTAATTTGGAGGT
Protein sequenceShow/hide protein sequence
MGSLAFKILWLVVLCALIWTSETRKLVISNGGEIESEKTVAFQFFPGYGGGLGGGGGFGGGGGGGLGGGSGFGSGGGGGFGSGIGGLGSGGGGGFGGVGDGGALGGGAGG
GAGGGFGGGLP