; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc03G06830 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc03G06830
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionRemorin_C domain-containing protein
Genome locationClcChr03:6909868..6911454
RNA-Seq ExpressionClc03G06830
SyntenyClc03G06830
Gene Ontology termsGO:0050896 - response to stimulus (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008444703.1 PREDICTED: uncharacterized protein LOC103487959 [Cucumis melo]1.0e-10983.88Show/hide
Query:  MEWCVGFNDREVCISFVVFKPMVLVVDDFIEALKQFSISTNNLGCIQSSVLKSIHGNMKLAIYLQNKWKILAQIIWCGLWAKRSIQNTELLSEALLQN-L
        MEWCVGFND+E+ +SFVVFKPMVLVVDDF+EALKQFS STNNLGCIQ+ VLKSIHGNM               IIWCG+WAKRSIQ+ +LLSE LLQ  +
Subjt:  MEWCVGFNDREVCISFVVFKPMVLVVDDFIEALKQFSISTNNLGCIQSSVLKSIHGNMKLAIYLQNKWKILAQIIWCGLWAKRSIQNTELLSEALLQN-L

Query:  TKTSNMATLIDLSFFEAYGGESMDGSNVAKFTNKSIISMISIAAKCGDINDLSYACLAIFKSRFRKIEGISSGICLKSQNRPTVVSLYVWNSPFYCYSWI
        +KTSNMATL+DLSFFEAYGGESMDGS VAKFT++SIISMISIAAKCGDINDLSYACLAIFKSRFRKIEGI+SGICLKSQNRPTVVSLYVWNSPFYCYSWI
Subjt:  TKTSNMATLIDLSFFEAYGGESMDGSNVAKFTNKSIISMISIAAKCGDINDLSYACLAIFKSRFRKIEGISSGICLKSQNRPTVVSLYVWNSPFYCYSWI

Query:  LNSDHLNSMLPYLDRFSLCIKYDIYQVVNVSDANVTNFKDLD
        LNSDHLNSMLPYLDRFSLCIKYDIYQVVNVSDANV+ FKDLD
Subjt:  LNSDHLNSMLPYLDRFSLCIKYDIYQVVNVSDANVTNFKDLD

XP_011648519.1 uncharacterized protein LOC105434510 isoform X2 [Cucumis sativus]2.6e-10882.23Show/hide
Query:  MEWCVGFNDREVCISFVVFKPMVLVVDDFIEALKQFSISTNNLGCIQSSVLKSIHGNMKLAIYLQNKWKILAQIIWCGLWAKRSIQNTELLSEALLQN-L
        MEWCVGFND+E+ +SFVVFKPMVLVVDDF+EALKQFS STNNLGCIQ+ VLKSIHGNM               IIWCG+W K+ IQN +LLSE LLQ  +
Subjt:  MEWCVGFNDREVCISFVVFKPMVLVVDDFIEALKQFSISTNNLGCIQSSVLKSIHGNMKLAIYLQNKWKILAQIIWCGLWAKRSIQNTELLSEALLQN-L

Query:  TKTSNMATLIDLSFFEAYGGESMDGSNVAKFTNKSIISMISIAAKCGDINDLSYACLAIFKSRFRKIEGISSGICLKSQNRPTVVSLYVWNSPFYCYSWI
        +KTSNMATL+DLSFFEAYGGESMDGS VAKFT+KSIISMISIAAKCGDINDLSYACLAIFKSRFRKIEG++SGICLKSQNRPTVVSL+VWNSPFYCYSWI
Subjt:  TKTSNMATLIDLSFFEAYGGESMDGSNVAKFTNKSIISMISIAAKCGDINDLSYACLAIFKSRFRKIEGISSGICLKSQNRPTVVSLYVWNSPFYCYSWI

Query:  LNSDHLNSMLPYLDRFSLCIKYDIYQVVNVSDANVTNFKDLD
        LNSDHLNSMLPYLD FSLCIKYDIYQVVN+SDANV NFKDLD
Subjt:  LNSDHLNSMLPYLDRFSLCIKYDIYQVVNVSDANVTNFKDLD

XP_023001460.1 uncharacterized protein LOC111495588 isoform X1 [Cucurbita maxima]1.1e-10077.18Show/hide
Query:  EWCVGFNDREVCISFVVFKPMVLVVDDFIEALKQFSISTNNLGCIQSSVLKSIHGNMKLAIYLQNKWKILAQIIWCGLWAKRSIQNTELLSEALLQNLTK
        EWCVGFNDREV I FVVFKP+V VVD F+EALKQFS ST NLGCIQSSVLKSIHGNM               IIWCG+WAKRSI+NTELLSEA+L+NLTK
Subjt:  EWCVGFNDREVCISFVVFKPMVLVVDDFIEALKQFSISTNNLGCIQSSVLKSIHGNMKLAIYLQNKWKILAQIIWCGLWAKRSIQNTELLSEALLQNLTK

Query:  TSNMATLIDLSFFEAYGGESMDGSNVAKFTNKSIISMISIAAKC-GDINDLSYACLAIFKSRFRKIEGISSGICLKSQNRPTVVSLYVWNSPFYCYSWIL
         S MAT+ID+SFFEAYGG+SMDGS VA+F+   +ISMIS+AAK  GD+NDLSYACLAIFKSRF+KIEG+ SGICLKSQNR TV+SLYVWNSPFYCYSWIL
Subjt:  TSNMATLIDLSFFEAYGGESMDGSNVAKFTNKSIISMISIAAKC-GDINDLSYACLAIFKSRFRKIEGISSGICLKSQNRPTVVSLYVWNSPFYCYSWIL

Query:  NSDHLNSMLPYLDRFSLCIKYDIYQVVNVSDANVTNFKDLD
        NSDHLNSM+PYLDRFSLCIKYD++QVVNV DANV +F DLD
Subjt:  NSDHLNSMLPYLDRFSLCIKYDIYQVVNVSDANVTNFKDLD

XP_031738897.1 uncharacterized protein LOC105434510 isoform X1 [Cucumis sativus]6.5e-10472.96Show/hide
Query:  MEWCVGFNDREVCISFVVFKPMVLVVDDFIEALKQFSISTNNLGCIQSSVLKSIHGNMKLAIYLQNKWKILAQIIWCGLWAKRSIQNTELLSEALLQ---
        MEWCVGFND+E+ +SFVVFKPMVLVVDDF+EALKQFS STNNLGCIQ+ VLKSIHGNM               IIWCG+W K+ IQN +LLSE L+    
Subjt:  MEWCVGFNDREVCISFVVFKPMVLVVDDFIEALKQFSISTNNLGCIQSSVLKSIHGNMKLAIYLQNKWKILAQIIWCGLWAKRSIQNTELLSEALLQ---

Query:  --------------------------NLTKTSNMATLIDLSFFEAYGGESMDGSNVAKFTNKSIISMISIAAKCGDINDLSYACLAIFKSRFRKIEGISS
                                   ++KTSNMATL+DLSFFEAYGGESMDGS VAKFT+KSIISMISIAAKCGDINDLSYACLAIFKSRFRKIEG++S
Subjt:  --------------------------NLTKTSNMATLIDLSFFEAYGGESMDGSNVAKFTNKSIISMISIAAKCGDINDLSYACLAIFKSRFRKIEGISS

Query:  GICLKSQNRPTVVSLYVWNSPFYCYSWILNSDHLNSMLPYLDRFSLCIKYDIYQVVNVSDANVTNFKDLD
        GICLKSQNRPTVVSL+VWNSPFYCYSWILNSDHLNSMLPYLD FSLCIKYDIYQVVN+SDANV NFKDLD
Subjt:  GICLKSQNRPTVVSLYVWNSPFYCYSWILNSDHLNSMLPYLDRFSLCIKYDIYQVVNVSDANVTNFKDLD

XP_038895125.1 uncharacterized protein LOC120083436 [Benincasa hispida]3.4e-11386.42Show/hide
Query:  MEWCVGFNDREVCISFVVFKPMVLVVDDFIEALKQFSISTNNLGCIQSSVLKSIHGNMKLAIYLQNKWKILAQIIWCGLWAKRSIQNTELLSEALLQNLT
        MEWCVGFND+E  ISFVVFKPMVLV+DDF+EALKQFS STNNLGCIQSSVLKSIHGNM               IIWCG+WAKRSIQNT+LLSE LLQ L 
Subjt:  MEWCVGFNDREVCISFVVFKPMVLVVDDFIEALKQFSISTNNLGCIQSSVLKSIHGNMKLAIYLQNKWKILAQIIWCGLWAKRSIQNTELLSEALLQNLT

Query:  KTSNMATLIDLSFFEAYGGESMDGSNVAKFTNKSIISMISIAAKCGDINDLSYACLAIFKSRFRKIEGISSGICLKSQNRPTVVSLYVWNSPFYCYSWIL
        KTSNMATLIDLSFFEAYGGESMDGSNV KFT+KSIISMISIAAKCGDINDLSYACLAIFKSRFRKIEG+SSGICLKSQN  TVVSLYVWNSPFYCYSWIL
Subjt:  KTSNMATLIDLSFFEAYGGESMDGSNVAKFTNKSIISMISIAAKCGDINDLSYACLAIFKSRFRKIEGISSGICLKSQNRPTVVSLYVWNSPFYCYSWIL

Query:  NSDHLNSMLPYLDRFSLCIKYDIYQVVNVSDANVTNFKDLDVK
        NSDHLNSMLPYLDRFSLCIKYDIYQVVNVSD NV NFKDLDVK
Subjt:  NSDHLNSMLPYLDRFSLCIKYDIYQVVNVSDANVTNFKDLDVK

TrEMBL top hitse value%identityAlignment
A0A0A0LXV2 Uncharacterized protein1.2e-10882.23Show/hide
Query:  MEWCVGFNDREVCISFVVFKPMVLVVDDFIEALKQFSISTNNLGCIQSSVLKSIHGNMKLAIYLQNKWKILAQIIWCGLWAKRSIQNTELLSEALLQN-L
        MEWCVGFND+E+ +SFVVFKPMVLVVDDF+EALKQFS STNNLGCIQ+ VLKSIHGNM               IIWCG+W K+ IQN +LLSE LLQ  +
Subjt:  MEWCVGFNDREVCISFVVFKPMVLVVDDFIEALKQFSISTNNLGCIQSSVLKSIHGNMKLAIYLQNKWKILAQIIWCGLWAKRSIQNTELLSEALLQN-L

Query:  TKTSNMATLIDLSFFEAYGGESMDGSNVAKFTNKSIISMISIAAKCGDINDLSYACLAIFKSRFRKIEGISSGICLKSQNRPTVVSLYVWNSPFYCYSWI
        +KTSNMATL+DLSFFEAYGGESMDGS VAKFT+KSIISMISIAAKCGDINDLSYACLAIFKSRFRKIEG++SGICLKSQNRPTVVSL+VWNSPFYCYSWI
Subjt:  TKTSNMATLIDLSFFEAYGGESMDGSNVAKFTNKSIISMISIAAKCGDINDLSYACLAIFKSRFRKIEGISSGICLKSQNRPTVVSLYVWNSPFYCYSWI

Query:  LNSDHLNSMLPYLDRFSLCIKYDIYQVVNVSDANVTNFKDLD
        LNSDHLNSMLPYLD FSLCIKYDIYQVVN+SDANV NFKDLD
Subjt:  LNSDHLNSMLPYLDRFSLCIKYDIYQVVNVSDANVTNFKDLD

A0A1S3BAH1 uncharacterized protein LOC1034879595.0e-11083.88Show/hide
Query:  MEWCVGFNDREVCISFVVFKPMVLVVDDFIEALKQFSISTNNLGCIQSSVLKSIHGNMKLAIYLQNKWKILAQIIWCGLWAKRSIQNTELLSEALLQN-L
        MEWCVGFND+E+ +SFVVFKPMVLVVDDF+EALKQFS STNNLGCIQ+ VLKSIHGNM               IIWCG+WAKRSIQ+ +LLSE LLQ  +
Subjt:  MEWCVGFNDREVCISFVVFKPMVLVVDDFIEALKQFSISTNNLGCIQSSVLKSIHGNMKLAIYLQNKWKILAQIIWCGLWAKRSIQNTELLSEALLQN-L

Query:  TKTSNMATLIDLSFFEAYGGESMDGSNVAKFTNKSIISMISIAAKCGDINDLSYACLAIFKSRFRKIEGISSGICLKSQNRPTVVSLYVWNSPFYCYSWI
        +KTSNMATL+DLSFFEAYGGESMDGS VAKFT++SIISMISIAAKCGDINDLSYACLAIFKSRFRKIEGI+SGICLKSQNRPTVVSLYVWNSPFYCYSWI
Subjt:  TKTSNMATLIDLSFFEAYGGESMDGSNVAKFTNKSIISMISIAAKCGDINDLSYACLAIFKSRFRKIEGISSGICLKSQNRPTVVSLYVWNSPFYCYSWI

Query:  LNSDHLNSMLPYLDRFSLCIKYDIYQVVNVSDANVTNFKDLD
        LNSDHLNSMLPYLDRFSLCIKYDIYQVVNVSDANV+ FKDLD
Subjt:  LNSDHLNSMLPYLDRFSLCIKYDIYQVVNVSDANVTNFKDLD

A0A6J1CGA3 uncharacterized protein LOC1110109553.5e-8771.31Show/hide
Query:  MEWCVGFNDREVCISFVVFKPMVLVVDDFIEALKQFSISTNNLGCIQSSVLKSIHGNMKLAIYLQNKWKILAQIIWCGLWAKRSIQNTELLSEALLQNLT
        ME  V FNDRE+ ISF+VFKPMV+VVDDFIEALK+FS  T NLGCIQSSVLKSIHGNM               IIWCG WAKRSIQNTE L+E LLQNLT
Subjt:  MEWCVGFNDREVCISFVVFKPMVLVVDDFIEALKQFSISTNNLGCIQSSVLKSIHGNMKLAIYLQNKWKILAQIIWCGLWAKRSIQNTELLSEALLQNLT

Query:  KTSNMATLIDLSFFEAYGGESMDGSNVAKFTNKSIISMISIAAKCGDINDLSYACLAIFKSRFRKIEGISSGICLKSQNRPTVVSLYVWNSPFYCYSWIL
          S+MA+L DLSFF+AY G+SMDGS+VAKF++ S ISMIS AAK GDI+DLSYACLAIFKSRFRK+EG+ SGICLK ++RP+VVSLYVWNS F CYSWIL
Subjt:  KTSNMATLIDLSFFEAYGGESMDGSNVAKFTNKSIISMISIAAKCGDINDLSYACLAIFKSRFRKIEGISSGICLKSQNRPTVVSLYVWNSPFYCYSWIL

Query:  NSDHLNSMLPYLDRF-SLCIKYDIYQVVNVSDANVTN
        NSDH+ SMLPYLDRF  LC+KYD++QVV+V+ ++ TN
Subjt:  NSDHLNSMLPYLDRF-SLCIKYDIYQVVNVSDANVTN

A0A6J1EGH4 uncharacterized protein LOC111434118 isoform X11.2e-10077.08Show/hide
Query:  EWCVGFNDREVCISFVVFKPMVLVVDDFIEALKQFSISTNNLGCIQSSVLKSIHGNMKLAIYLQNKWKILAQIIWCGLWAKRSIQNTELLSEALLQNLTK
        EWCVGFNDREV I FVVFKP+V VVD F+EALKQFS ST NLGCIQSSVLKSIHGNM               IIWCG+WAKRSI+NTELLSEA+L+NLTK
Subjt:  EWCVGFNDREVCISFVVFKPMVLVVDDFIEALKQFSISTNNLGCIQSSVLKSIHGNMKLAIYLQNKWKILAQIIWCGLWAKRSIQNTELLSEALLQNLTK

Query:  TSNMATLIDLSFFEAYGGESMDGSNVAKFTNKSIISMISIAAKC-GDINDLSYACLAIFKSRFRKIEGISSGICLKSQNRPTVVSLYVWNSPFYCYSWIL
         S+MAT+ID+SFFEAYGG+SMDGS VAKF+   +ISMIS+AAK  GD+NDLSYACLAIFKSRF+KIEG+ SG+CLKSQNR TV+SLYVWNSPFYCYSWIL
Subjt:  TSNMATLIDLSFFEAYGGESMDGSNVAKFTNKSIISMISIAAKC-GDINDLSYACLAIFKSRFRKIEGISSGICLKSQNRPTVVSLYVWNSPFYCYSWIL

Query:  NSDHLNSMLPYLDRFSLCIKYDIYQVVNVSDANVTNFKDL
        NSDHLNSM+PYLDRFSLCIKYD++QVVNV DANV +F DL
Subjt:  NSDHLNSMLPYLDRFSLCIKYDIYQVVNVSDANVTNFKDL

A0A6J1KL93 uncharacterized protein LOC111495588 isoform X15.6e-10177.18Show/hide
Query:  EWCVGFNDREVCISFVVFKPMVLVVDDFIEALKQFSISTNNLGCIQSSVLKSIHGNMKLAIYLQNKWKILAQIIWCGLWAKRSIQNTELLSEALLQNLTK
        EWCVGFNDREV I FVVFKP+V VVD F+EALKQFS ST NLGCIQSSVLKSIHGNM               IIWCG+WAKRSI+NTELLSEA+L+NLTK
Subjt:  EWCVGFNDREVCISFVVFKPMVLVVDDFIEALKQFSISTNNLGCIQSSVLKSIHGNMKLAIYLQNKWKILAQIIWCGLWAKRSIQNTELLSEALLQNLTK

Query:  TSNMATLIDLSFFEAYGGESMDGSNVAKFTNKSIISMISIAAKC-GDINDLSYACLAIFKSRFRKIEGISSGICLKSQNRPTVVSLYVWNSPFYCYSWIL
         S MAT+ID+SFFEAYGG+SMDGS VA+F+   +ISMIS+AAK  GD+NDLSYACLAIFKSRF+KIEG+ SGICLKSQNR TV+SLYVWNSPFYCYSWIL
Subjt:  TSNMATLIDLSFFEAYGGESMDGSNVAKFTNKSIISMISIAAKC-GDINDLSYACLAIFKSRFRKIEGISSGICLKSQNRPTVVSLYVWNSPFYCYSWIL

Query:  NSDHLNSMLPYLDRFSLCIKYDIYQVVNVSDANVTNFKDLD
        NSDHLNSM+PYLDRFSLCIKYD++QVVNV DANV +F DLD
Subjt:  NSDHLNSMLPYLDRFSLCIKYDIYQVVNVSDANVTNFKDLD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGTGGTGTGTGGGTTTTAATGATAGAGAAGTTTGTATAAGTTTTGTTGTATTCAAGCCAATGGTATTGGTTGTAGATGATTTTATTGAAGCCTTGAAACAATTCTC
CATCTCCACCAATAATCTTGGTTGTATTCAGAGCTCTGTTCTGAAGAGCATCCATGGAAATATGAAATTGGCTATCTACCTGCAAAACAAATGGAAAATTTTGGCACAGA
TCATATGGTGTGGACTTTGGGCAAAGAGATCAATTCAAAACACAGAATTATTATCTGAAGCACTTCTTCAAAACTTGACAAAAACATCAAACATGGCAACCTTAATCGAT
CTTAGCTTCTTCGAAGCTTATGGTGGAGAGTCCATGGATGGTTCTAATGTTGCAAAATTTACAAATAAAAGCATCATATCAATGATCTCAATAGCTGCAAAATGTGGTGA
TATAAACGATCTGTCCTACGCTTGCTTGGCAATTTTCAAGTCTCGATTTCGAAAGATTGAAGGCATAAGTTCCGGAATTTGCTTGAAATCTCAAAATAGGCCAACTGTTG
TTTCACTCTATGTTTGGAATTCTCCCTTTTATTGTTACTCATGGATCTTGAATTCGGATCATTTGAACTCAATGTTACCTTATCTTGATCGTTTTTCCCTTTGTATTAAA
TATGATATATATCAAGTGGTGAATGTAAGCGATGCAAATGTGACTAACTTTAAGGATTTGGATGTGAAATAA
mRNA sequenceShow/hide mRNA sequence
AGAGAGAGAGAGAGAGAGAGAGATGGAGTGGTGTGTGGGTTTTAATGATAGAGAAGTTTGTATAAGTTTTGTTGTATTCAAGCCAATGGTATTGGTTGTAGATGATTTTA
TTGAAGCCTTGAAACAATTCTCCATCTCCACCAATAATCTTGGTTGTATTCAGAGCTCTGTTCTGAAGAGCATCCATGGAAATATGAAATTGGCTATCTACCTGCAAAAC
AAATGGAAAATTTTGGCACAGATCATATGGTGTGGACTTTGGGCAAAGAGATCAATTCAAAACACAGAATTATTATCTGAAGCACTTCTTCAAAACTTGACAAAAACATC
AAACATGGCAACCTTAATCGATCTTAGCTTCTTCGAAGCTTATGGTGGAGAGTCCATGGATGGTTCTAATGTTGCAAAATTTACAAATAAAAGCATCATATCAATGATCT
CAATAGCTGCAAAATGTGGTGATATAAACGATCTGTCCTACGCTTGCTTGGCAATTTTCAAGTCTCGATTTCGAAAGATTGAAGGCATAAGTTCCGGAATTTGCTTGAAA
TCTCAAAATAGGCCAACTGTTGTTTCACTCTATGTTTGGAATTCTCCCTTTTATTGTTACTCATGGATCTTGAATTCGGATCATTTGAACTCAATGTTACCTTATCTTGA
TCGTTTTTCCCTTTGTATTAAATATGATATATATCAAGTGGTGAATGTAAGCGATGCAAATGTGACTAACTTTAAGGATTTGGATGTGAAATAAAGAAAAGAAAGGGAGG
GGGAAAAGTGCAAATCTTGTGATGTGAAATAAAGAAAAGAAAGATACTAGAATAGATTATTATTATTATTATTATTAT
Protein sequenceShow/hide protein sequence
MEWCVGFNDREVCISFVVFKPMVLVVDDFIEALKQFSISTNNLGCIQSSVLKSIHGNMKLAIYLQNKWKILAQIIWCGLWAKRSIQNTELLSEALLQNLTKTSNMATLID
LSFFEAYGGESMDGSNVAKFTNKSIISMISIAAKCGDINDLSYACLAIFKSRFRKIEGISSGICLKSQNRPTVVSLYVWNSPFYCYSWILNSDHLNSMLPYLDRFSLCIK
YDIYQVVNVSDANVTNFKDLDVK