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Clc03G06920 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc03G06920
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr03:7039284..7039586
RNA-Seq ExpressionClc03G06920
SyntenyClc03G06920
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054012.1 hypothetical protein E6C27_scaffold318G00660 [Cucumis melo var. makuwa]1.6e-1669.05Show/hide
Query:  NNNHHHLTPSAQPSPPLTPFSAIAPPPFGRISRPQIQITLHTIYEDETEAKIWRRHCYHRKQASSSSFSSALSCFRPLRSLKCS
        NNN+  LTPSAQPS PLT FSAI PP F   SRPQIQITL+TIYE+ETE K     C    QASSSS SSALS FRPL S+KCS
Subjt:  NNNHHHLTPSAQPSPPLTPFSAIAPPPFGRISRPQIQITLHTIYEDETEAKIWRRHCYHRKQASSSSFSSALSCFRPLRSLKCS

KAE8653296.1 hypothetical protein Csa_023338 [Cucumis sativus]1.9e-2574Show/hide
Query:  MSLRLIYPIAQEMANNNNNHHHLTPSAQPSPPLTPFSAIAPPPFGRISRPQIQITLHTIYEDETEAKIWRRHCYHRKQASSSSFSSALSCFRPLRSLKCS
        MSLRLIYPIAQEMANNN     LTPS+QPS PLT FSAIAPP F   SRP IQITL+TIYE+ETE KI    C    QA SSSFSSALSCFRPLRS+KCS
Subjt:  MSLRLIYPIAQEMANNNNNHHHLTPSAQPSPPLTPFSAIAPPPFGRISRPQIQITLHTIYEDETEAKIWRRHCYHRKQASSSSFSSALSCFRPLRSLKCS

KAG6583881.1 hypothetical protein SDJN03_19813, partial [Cucurbita argyrosperma subsp. sororia]2.0e-2262.39Show/hide
Query:  MSLRLIYPIAQEMANNNNNHHHLTP----SAQPSPPLTPFSAIAPPPFGRISRPQIQITLHTIYEDETEAKIW-----RRHCYHRKQASSSSFSSALSCF
        MS RL+YPI+QEM NNNN+   + P    S Q SPPLT FSAIAPP  G ISR QIQ+TL TIYEDE+E ++      RRHCY RK + S   S+ALSCF
Subjt:  MSLRLIYPIAQEMANNNNNHHHLTP----SAQPSPPLTPFSAIAPPPFGRISRPQIQITLHTIYEDETEAKIW-----RRHCYHRKQASSSSFSSALSCF

Query:  RPLRSLKCS
        RPLRSLKCS
Subjt:  RPLRSLKCS

TrEMBL top hitse value%identityAlignment
A0A0A0M102 Uncharacterized protein8.3e-1971.43Show/hide
Query:  NNNHHHLTPSAQPSPPLTPFSAIAPPPFGRISRPQIQITLHTIYEDETEAKIWRRHCYHRKQASSSSFSSALSCFRPLRSLKCS
        NNN   LTPS+QPS PLT FSAIAPP F   SRP IQITL+TIYE+ETE KI    C    QA SSSFSSALSCFRPLRS+KCS
Subjt:  NNNHHHLTPSAQPSPPLTPFSAIAPPPFGRISRPQIQITLHTIYEDETEAKIWRRHCYHRKQASSSSFSSALSCFRPLRSLKCS

A0A5D3DAX8 Uncharacterized protein7.8e-1769.05Show/hide
Query:  NNNHHHLTPSAQPSPPLTPFSAIAPPPFGRISRPQIQITLHTIYEDETEAKIWRRHCYHRKQASSSSFSSALSCFRPLRSLKCS
        NNN+  LTPSAQPS PLT FSAI PP F   SRPQIQITL+TIYE+ETE K     C    QASSSS SSALS FRPL S+KCS
Subjt:  NNNHHHLTPSAQPSPPLTPFSAIAPPPFGRISRPQIQITLHTIYEDETEAKIWRRHCYHRKQASSSSFSSALSCFRPLRSLKCS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTTAAGGCTCATATATCCCATCGCACAAGAAATGGCCAACAATAACAACAACCACCACCACCTAACGCCTTCCGCCCAACCATCGCCGCCGCTAACCCCATTTTC
AGCGATTGCGCCGCCGCCCTTCGGCCGTATTTCTAGACCCCAAATTCAAATTACTCTGCACACCATTTATGAAGACGAAACCGAAGCCAAAATCTGGCGTCGCCATTGTT
ACCATCGTAAACAAGCTTCTTCTTCCTCTTTCTCCTCGGCTCTCTCTTGTTTTCGTCCTCTTCGATCACTTAAATGTTCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTTTAAGGCTCATATATCCCATCGCACAAGAAATGGCCAACAATAACAACAACCACCACCACCTAACGCCTTCCGCCCAACCATCGCCGCCGCTAACCCCATTTTC
AGCGATTGCGCCGCCGCCCTTCGGCCGTATTTCTAGACCCCAAATTCAAATTACTCTGCACACCATTTATGAAGACGAAACCGAAGCCAAAATCTGGCGTCGCCATTGTT
ACCATCGTAAACAAGCTTCTTCTTCCTCTTTCTCCTCGGCTCTCTCTTGTTTTCGTCCTCTTCGATCACTTAAATGTTCTTGA
Protein sequenceShow/hide protein sequence
MSLRLIYPIAQEMANNNNNHHHLTPSAQPSPPLTPFSAIAPPPFGRISRPQIQITLHTIYEDETEAKIWRRHCYHRKQASSSSFSSALSCFRPLRSLKCS