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Clc03G07830 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc03G07830
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr03:8050237..8050677
RNA-Seq ExpressionClc03G07830
SyntenyClc03G07830
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EOY27907.1 Uncharacterized protein TCM_029626 [Theobroma cacao]6.4e-1451Show/hide
Query:  LSFLFFFFFLCL-------SCNALSPDR---KSNFPSSDRTLLSLQRRRDQQISNCGEKVSALQCSQTPKCRWCRSDVIDDTCFTRAEALRLPQQVFSCD
        LS LF   FL L       S ++ SPD    K    S  RTLL LQR    QI +CGE +S  QC Q PKCRWC S+ +D+ CF++AEA RLPQQVF CD
Subjt:  LSFLFFFFFLCL-------SCNALSPDR---KSNFPSSDRTLLSLQRRRDQQISNCGEKVSALQCSQTPKCRWCRSDVIDDTCFTRAEALRLPQQVFSCD

KAA0044701.1 hypothetical protein E6C27_scaffold46G004570 [Cucumis melo var. makuwa]4.1e-2990.54Show/hide
Query:  LSPDRKSNFPSSDRTLLSLQRRRDQQISNCGEKVSALQCSQTPKCRWCRSDVIDDTCFTRAEALRLPQQVFSCD
        LSPDRK N PSS RTL +LQRRRDQQISNCGEKVSA QCSQT KCRWCRSDVIDDTCFTRAEALRLPQQVFSCD
Subjt:  LSPDRKSNFPSSDRTLLSLQRRRDQQISNCGEKVSALQCSQTPKCRWCRSDVIDDTCFTRAEALRLPQQVFSCD

KAG6573331.1 hypothetical protein SDJN03_27218, partial [Cucurbita argyrosperma subsp. sororia]7.0e-3779.05Show/hide
Query:  MARSSHLPLPLSIFLLSFLFFFFFLCLSCNALSPDRKSNFPSSDRTLLSLQRRRDQQISNCGEKVSALQCSQTPKCRWCRSDVIDDTCFTRAEALRLPQQ
        M RS HL  PLSIFL+SFL FF F+C+S NALS  RK N PSSDR LLSLQRRRD++I NCGEKVSALQCS+TP CRWCRSD IDDTCF+RAEALRLPQQ
Subjt:  MARSSHLPLPLSIFLLSFLFFFFFLCLSCNALSPDRKSNFPSSDRTLLSLQRRRDQQISNCGEKVSALQCSQTPKCRWCRSDVIDDTCFTRAEALRLPQQ

Query:  VFSCD
        VFSCD
Subjt:  VFSCD

KDP21149.1 hypothetical protein JCGZ_21620 [Jatropha curcas]6.4e-1447.87Show/hide
Query:  LSFLFFFFFLCL----SCNALSPDRKSNFPSSDRTLLSLQRRRDQQISNCGEKVSALQCSQTPKCRWCRSDVIDDTCFTRAEALRLPQQVFSCD
        +SF  F  FL      S +  S  +  +  +S R+LL+ QR   QQI NC   V+  QCSQ PKCRWC+S+ +DD CF++ EA RLPQQVF CD
Subjt:  LSFLFFFFFLCL----SCNALSPDRKSNFPSSDRTLLSLQRRRDQQISNCGEKVSALQCSQTPKCRWCRSDVIDDTCFTRAEALRLPQQVFSCD

OMO65460.1 hypothetical protein COLO4_31211 [Corchorus olitorius]4.4e-1552.08Show/hide
Query:  SIFLLSFLFFFFFLCLS--CNALSPDRKSNFPSSDRTLLSLQRRRDQQISNCGEKVSALQCSQTPKCRWCRSDVIDDTCFTRAEALRLPQQVFSCD
        +I  LS LF   FL LS      + D +  + S  R+LL+LQR    QI NCGE +S  QC Q PKCRWCRS+ +DD CF ++EA RLPQQVF CD
Subjt:  SIFLLSFLFFFFFLCLS--CNALSPDRKSNFPSSDRTLLSLQRRRDQQISNCGEKVSALQCSQTPKCRWCRSDVIDDTCFTRAEALRLPQQVFSCD

TrEMBL top hitse value%identityAlignment
A0A061GFG8 Uncharacterized protein3.1e-1451Show/hide
Query:  LSFLFFFFFLCL-------SCNALSPDR---KSNFPSSDRTLLSLQRRRDQQISNCGEKVSALQCSQTPKCRWCRSDVIDDTCFTRAEALRLPQQVFSCD
        LS LF   FL L       S ++ SPD    K    S  RTLL LQR    QI +CGE +S  QC Q PKCRWC S+ +D+ CF++AEA RLPQQVF CD
Subjt:  LSFLFFFFFLCL-------SCNALSPDR---KSNFPSSDRTLLSLQRRRDQQISNCGEKVSALQCSQTPKCRWCRSDVIDDTCFTRAEALRLPQQVFSCD

A0A067JNS3 Uncharacterized protein3.1e-1447.87Show/hide
Query:  LSFLFFFFFLCL----SCNALSPDRKSNFPSSDRTLLSLQRRRDQQISNCGEKVSALQCSQTPKCRWCRSDVIDDTCFTRAEALRLPQQVFSCD
        +SF  F  FL      S +  S  +  +  +S R+LL+ QR   QQI NC   V+  QCSQ PKCRWC+S+ +DD CF++ EA RLPQQVF CD
Subjt:  LSFLFFFFFLCL----SCNALSPDRKSNFPSSDRTLLSLQRRRDQQISNCGEKVSALQCSQTPKCRWCRSDVIDDTCFTRAEALRLPQQVFSCD

A0A0A0LX55 Uncharacterized protein4.6e-4288.35Show/hide
Query:  RSSHLPLPLSIFLLSFLFFFFFLCLSCNALSPDRKSNFPSSDRTLLSLQRRRDQQISNCGEKVSALQCSQTPKCRWCRSDVIDDTCFTRAEALRLPQQVF
        RSSHL  PLSIFL+SFLFFFF   +SCNALSPDRK N PSS RTL SLQRRRDQQISNCGEKVSALQCSQTPKCRWCRSD+IDDTCFTRAEALRLPQQVF
Subjt:  RSSHLPLPLSIFLLSFLFFFFFLCLSCNALSPDRKSNFPSSDRTLLSLQRRRDQQISNCGEKVSALQCSQTPKCRWCRSDVIDDTCFTRAEALRLPQQVF

Query:  SCD
        SCD
Subjt:  SCD

A0A1R3H5C1 Uncharacterized protein2.1e-1552.08Show/hide
Query:  SIFLLSFLFFFFFLCLS--CNALSPDRKSNFPSSDRTLLSLQRRRDQQISNCGEKVSALQCSQTPKCRWCRSDVIDDTCFTRAEALRLPQQVFSCD
        +I  LS LF   FL LS      + D +  + S  R+LL+LQR    QI NCGE +S  QC Q PKCRWCRS+ +DD CF ++EA RLPQQVF CD
Subjt:  SIFLLSFLFFFFFLCLS--CNALSPDRKSNFPSSDRTLLSLQRRRDQQISNCGEKVSALQCSQTPKCRWCRSDVIDDTCFTRAEALRLPQQVFSCD

A0A5A7TT10 Uncharacterized protein2.0e-2990.54Show/hide
Query:  LSPDRKSNFPSSDRTLLSLQRRRDQQISNCGEKVSALQCSQTPKCRWCRSDVIDDTCFTRAEALRLPQQVFSCD
        LSPDRK N PSS RTL +LQRRRDQQISNCGEKVSA QCSQT KCRWCRSDVIDDTCFTRAEALRLPQQVFSCD
Subjt:  LSPDRKSNFPSSDRTLLSLQRRRDQQISNCGEKVSALQCSQTPKCRWCRSDVIDDTCFTRAEALRLPQQVFSCD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAGCCAAACTGAAAACTTGGTAGAGAAAATAGAAAACGCTCTAAAGAACCCAACCAGCTTTGAGTTTTGTAATTGTAGTTGTGGGATCTCAATTCCCACAGCTTC
TCCCTCAATTTCCATGGCAAGAAGCTCCCATCTTCCATTGCCGCTCTCCATTTTCCTCCTCTCCTTCCTTTTCTTCTTCTTCTTCCTCTGCTTGTCATGTAATGCCTTAT
CCCCAGATCGCAAATCCAACTTTCCCAGTTCGGATCGTACTTTATTGAGCTTACAGAGGAGGAGAGATCAACAAATCTCTAATTGCGGCGAAAAGGTTTCGGCTTTACAG
TGTTCCCAGACCCCCAAATGCCGGTGGTGCCGGAGCGATGTCATCGACGATACCTGCTTCACCAGAGCTGAGGCTTTGAGATTGCCCCAACAGGTCTTTTCCTGTGATTG
A
mRNA sequenceShow/hide mRNA sequence
ATGGATAGCCAAACTGAAAACTTGGTAGAGAAAATAGAAAACGCTCTAAAGAACCCAACCAGCTTTGAGTTTTGTAATTGTAGTTGTGGGATCTCAATTCCCACAGCTTC
TCCCTCAATTTCCATGGCAAGAAGCTCCCATCTTCCATTGCCGCTCTCCATTTTCCTCCTCTCCTTCCTTTTCTTCTTCTTCTTCCTCTGCTTGTCATGTAATGCCTTAT
CCCCAGATCGCAAATCCAACTTTCCCAGTTCGGATCGTACTTTATTGAGCTTACAGAGGAGGAGAGATCAACAAATCTCTAATTGCGGCGAAAAGGTTTCGGCTTTACAG
TGTTCCCAGACCCCCAAATGCCGGTGGTGCCGGAGCGATGTCATCGACGATACCTGCTTCACCAGAGCTGAGGCTTTGAGATTGCCCCAACAGGTCTTTTCCTGTGATTG
A
Protein sequenceShow/hide protein sequence
MDSQTENLVEKIENALKNPTSFEFCNCSCGISIPTASPSISMARSSHLPLPLSIFLLSFLFFFFFLCLSCNALSPDRKSNFPSSDRTLLSLQRRRDQQISNCGEKVSALQ
CSQTPKCRWCRSDVIDDTCFTRAEALRLPQQVFSCD