; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc03G09060 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc03G09060
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptiontranscription factor bHLH52
Genome locationClcChr03:9732754..9733668
RNA-Seq ExpressionClc03G09060
SyntenyClc03G09060
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
GO:0046983 - protein dimerization activity (molecular function)
InterPro domainsIPR011598 - Myc-type, basic helix-loop-helix (bHLH) domain
IPR036638 - Helix-loop-helix DNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6583823.1 Transcription factor basic helix-loop-helix 52, partial [Cucurbita argyrosperma subsp. sororia]2.5e-11371.43Show/hide
Query:  MAALTFYSNFYSDPSSYYHQFNYFSPEFSPDLCYFPPPQLLPDPTAFDY----VHDSVLYPTTAAPFYDDAFPLPFSDAYSYFSAPAIDQLIPVSADFFS
        MAAL+FYSNF SDPSSY+HQF+ FSPE SP+L + PPPQLLPDP AFDY    V  SV +PT  APF++D  P  FSD Y Y   PA+D  +PVSA+FF 
Subjt:  MAALTFYSNFYSDPSSYYHQFNYFSPEFSPDLCYFPPPQLLPDPTAFDY----VHDSVLYPTTAAPFYDDAFPLPFSDAYSYFSAPAIDQLIPVSADFFS

Query:  CDELEFHCPKRQRVMLEQSFCFGDGGGGSNVGGGGGYFPPPPPPPPPPEFFLGPWDCRMDNGEMKNDGECLKTKASPTPTSNNLSAQTIAARERRRKITA
        CDE EF+CPKRQRV++EQSFC+  GGGG NVGG GGYF       P PEFF   WD R+ N E+ N G+CLK   +P P+SNNLSAQTIAARERRRKITA
Subjt:  CDELEFHCPKRQRVMLEQSFCFGDGGGGSNVGGGGGYFPPPPPPPPPPEFFLGPWDCRMDNGEMKNDGECLKTKASPTPTSNNLSAQTIAARERRRKITA

Query:  KTQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQVAILQLKQETEHEQEEEKTKDLQILESTIIQEKLYTEEKCLIPKGFVQNLANFPEIQSHPSIFNSI
        KTQELGELVPGGSKMNTAEML+SAFKYVKFLQAQVAILQ+KQETE EQE  +T+DLQILEST+IQEKLY EEKCL+PKGFVQNL N PEIQS+PSI NSI
Subjt:  KTQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQVAILQLKQETEHEQEEEKTKDLQILESTIIQEKLYTEEKCLIPKGFVQNLANFPEIQSHPSIFNSI

Query:  NQILHNSS
        NQILH +S
Subjt:  NQILHNSS

XP_004135746.1 transcription factor bHLH52 [Cucumis sativus]1.5e-11874.04Show/hide
Query:  MAALTFYSNFYS-DPSSYYHQFNYFSPEFSPDLCYFPPPQLLPDPTAFDYVHDSVLYPTTAAPFYDDAFPLPFSDAYSYFSAPAIDQLIPVSADFFSCDE
        MAALT+YSNFYS DPS YYH F+YFSPEFSPDL Y PPPQLL  P AFDYV DS+ YPT     +DDA P  FSD Y  FSAP++D+ +PVS+ FF  DE
Subjt:  MAALTFYSNFYS-DPSSYYHQFNYFSPEFSPDLCYFPPPQLLPDPTAFDYVHDSVLYPTTAAPFYDDAFPLPFSDAYSYFSAPAIDQLIPVSADFFSCDE

Query:  LEFHCPKRQRVMLEQSFCFGDGGGGSNVGGGG-----GYFPPPPPPPPP-PEFFLGPWDCRMDNGEMKNDGECLKTKASPTPTS-NNLSAQTIAARERRR
         EFHCPKRQR + E SFC G G G  NVGGGG     G+FP PPPPPPP  E F GPWD RMDN EM+ND  CLK++ SP P+S NNLSAQTIAARERRR
Subjt:  LEFHCPKRQRVMLEQSFCFGDGGGGSNVGGGG-----GYFPPPPPPPPP-PEFFLGPWDCRMDNGEMKNDGECLKTKASPTPTS-NNLSAQTIAARERRR

Query:  KITAKTQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQVAILQLKQETEHEQEEEKTKDLQILESTIIQEKLYTEEKCLIPKGFVQNLANFPEIQSHPSI
        KIT KTQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQVAILQLKQET  EQE ++T++L+ILEST+IQEKLY+EEKCL+PKGF+QNLA+FPEIQSHPSI
Subjt:  KITAKTQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQVAILQLKQETEHEQEEEKTKDLQILESTIIQEKLYTEEKCLIPKGFVQNLANFPEIQSHPSI

Query:  FNSINQILHNSS
        FNSIN+ILHNSS
Subjt:  FNSINQILHNSS

XP_008445817.1 PREDICTED: transcription factor bHLH52 [Cucumis melo]4.6e-11572.41Show/hide
Query:  MAALTFYSNFYS-DPSSYYHQFNYFSPEFSPDLCYFPPPQLLPDPTAFDYVHDSVLYPTTAAPFYDDAFPLPFSDAYSYFSAPAIDQLIPVSADFFSCDE
        MAALTF+SNFYS DPSSY+H   YFSPEFSPDL Y PPP LL DP AF YV DSV YP     F DDAFP  FSDAY YFSAP++D+ +PVS+ FF  DE
Subjt:  MAALTFYSNFYS-DPSSYYHQFNYFSPEFSPDLCYFPPPQLLPDPTAFDYVHDSVLYPTTAAPFYDDAFPLPFSDAYSYFSAPAIDQLIPVSADFFSCDE

Query:  LEFHCPKRQRVMLEQSFCFGDGGGGSNVGGGG-------GYFPPPPPPPPPPEFFLGPWDCRMDNGEMKNDGECLKTK---ASPTPTSNNLSAQTIAARE
         EFHCPKRQR + EQSFC G+G G  NVGGGG       G+F     PPP  EFF GPWD RMDN EM ND  CLK++   A P P+SNNLSAQTIAARE
Subjt:  LEFHCPKRQRVMLEQSFCFGDGGGGSNVGGGG-------GYFPPPPPPPPPPEFFLGPWDCRMDNGEMKNDGECLKTK---ASPTPTSNNLSAQTIAARE

Query:  RRRKITAKTQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQVAILQLKQETEHEQEEE----KTKDLQILESTIIQEKLYTEEKCLIPKGFVQNLANFPE
        RRRKIT KTQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQVAILQLKQETE EQE+E    +T++L+ILEST+IQEKLY EEKCL+PKGF+QNLA+FPE
Subjt:  RRRKITAKTQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQVAILQLKQETEHEQEEE----KTKDLQILESTIIQEKLYTEEKCLIPKGFVQNLANFPE

Query:  IQSHPSIFNSINQILHNSS
        IQSHPSIFNSIN+ILHN+S
Subjt:  IQSHPSIFNSINQILHNSS

XP_022927111.1 transcription factor bHLH52-like [Cucurbita moschata]1.5e-11371.15Show/hide
Query:  MAALTFYSNFYSDPSSYYHQFNYFSPEFSPDLCYFPPPQLLPDPTAFDYVH----DSVLYPTTAAPFYDDAFPLPFSDAYSYFSAPAIDQLIPVSADFFS
        MAAL+FYSNF SDPSSY+HQF+ FSPE SP+L + PPPQLLPDP AFDY+H     SV +PT  APF+DD  P  FSD Y YF  PA+D  +PVSA+FF 
Subjt:  MAALTFYSNFYSDPSSYYHQFNYFSPEFSPDLCYFPPPQLLPDPTAFDYVH----DSVLYPTTAAPFYDDAFPLPFSDAYSYFSAPAIDQLIPVSADFFS

Query:  CDELEFHCPKRQRVMLEQSFCFGDGGGGSNVGGGGGYFPPPPPPPPPPEFFLGPWDCRMDNGEMKNDGECLKTKAS----PTPTSNNLSAQTIAARERRR
        CDE EF+CPKRQRV++EQSFC+  GGGG NVGG GGYF       P PEFF   WD R+ N E+ N G+CLK   +    P P+SNNLSAQTIAARERRR
Subjt:  CDELEFHCPKRQRVMLEQSFCFGDGGGGSNVGGGGGYFPPPPPPPPPPEFFLGPWDCRMDNGEMKNDGECLKTKAS----PTPTSNNLSAQTIAARERRR

Query:  KITAKTQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQVAILQLKQETEHEQEEEKTKDLQILESTIIQEKLYTEEKCLIPKGFVQNLANFPEIQSHPSI
        KITAKTQELGELVPGGSKMNTAEML+SAFKYVKFLQAQVAILQ+KQETE EQE  +T+DLQILEST+IQEKLY EEKCL+PKGFVQNL N PEIQS+PSI
Subjt:  KITAKTQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQVAILQLKQETEHEQEEEKTKDLQILESTIIQEKLYTEEKCLIPKGFVQNLANFPEIQSHPSI

Query:  FNSINQILHNSS
         NSINQILH +S
Subjt:  FNSINQILHNSS

XP_038894685.1 transcription factor bHLH52 [Benincasa hispida]2.8e-13683.12Show/hide
Query:  MAALTFYSNFYSDPSSYYHQFNYFSPEFSPDLCYFPPPQLLPDPTAFDYVHDSVLYPTTAAPFYDDAFPLPFSDAYSYFSAPAIDQLIPVSADFFSCDEL
        MAALTFYSNFYSDPSSYYHQF+YFSPEFSPDLCYFPPPQLL DP AFDYV DSV YPTTAAPF+DDAFP  FSDAY YFS PA+D+ +PVS +FF CDE 
Subjt:  MAALTFYSNFYSDPSSYYHQFNYFSPEFSPDLCYFPPPQLLPDPTAFDYVHDSVLYPTTAAPFYDDAFPLPFSDAYSYFSAPAIDQLIPVSADFFSCDEL

Query:  EFHCPKRQRVMLEQSFCFGD--GGGGSNVGGGGGYFPPPPPPPPPPEFFLGPWDCRMDNGEMKNDGECLKTKASPTP-TSNNLSAQTIAARERRRKITAK
        EFHCPKRQR +LEQSF  GD  GGGG NVGGGGGYFPPPP      E F   WD RMDN EM NDG CLKTK +P P +SNNLSAQTIAARERRRKITAK
Subjt:  EFHCPKRQRVMLEQSFCFGD--GGGGSNVGGGGGYFPPPPPPPPPPEFFLGPWDCRMDNGEMKNDGECLKTKASPTP-TSNNLSAQTIAARERRRKITAK

Query:  TQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQVAILQLKQETEHEQE-EEKTKDLQILESTIIQEKLYTEEKCLIPKGFVQNLANFPEIQSHPSIFNSI
        TQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQVAILQLKQETE EQE EE+T+DL+ILEST+IQEKLY+EEKCL+PKGFVQNLANFPEIQSHPSIFNSI
Subjt:  TQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQVAILQLKQETEHEQE-EEKTKDLQILESTIIQEKLYTEEKCLIPKGFVQNLANFPEIQSHPSIFNSI

Query:  NQILHNSS
        NQILHNSS
Subjt:  NQILHNSS

TrEMBL top hitse value%identityAlignment
A0A0A0LY56 BHLH domain-containing protein7.4e-11974.04Show/hide
Query:  MAALTFYSNFYS-DPSSYYHQFNYFSPEFSPDLCYFPPPQLLPDPTAFDYVHDSVLYPTTAAPFYDDAFPLPFSDAYSYFSAPAIDQLIPVSADFFSCDE
        MAALT+YSNFYS DPS YYH F+YFSPEFSPDL Y PPPQLL  P AFDYV DS+ YPT     +DDA P  FSD Y  FSAP++D+ +PVS+ FF  DE
Subjt:  MAALTFYSNFYS-DPSSYYHQFNYFSPEFSPDLCYFPPPQLLPDPTAFDYVHDSVLYPTTAAPFYDDAFPLPFSDAYSYFSAPAIDQLIPVSADFFSCDE

Query:  LEFHCPKRQRVMLEQSFCFGDGGGGSNVGGGG-----GYFPPPPPPPPP-PEFFLGPWDCRMDNGEMKNDGECLKTKASPTPTS-NNLSAQTIAARERRR
         EFHCPKRQR + E SFC G G G  NVGGGG     G+FP PPPPPPP  E F GPWD RMDN EM+ND  CLK++ SP P+S NNLSAQTIAARERRR
Subjt:  LEFHCPKRQRVMLEQSFCFGDGGGGSNVGGGG-----GYFPPPPPPPPP-PEFFLGPWDCRMDNGEMKNDGECLKTKASPTPTS-NNLSAQTIAARERRR

Query:  KITAKTQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQVAILQLKQETEHEQEEEKTKDLQILESTIIQEKLYTEEKCLIPKGFVQNLANFPEIQSHPSI
        KIT KTQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQVAILQLKQET  EQE ++T++L+ILEST+IQEKLY+EEKCL+PKGF+QNLA+FPEIQSHPSI
Subjt:  KITAKTQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQVAILQLKQETEHEQEEEKTKDLQILESTIIQEKLYTEEKCLIPKGFVQNLANFPEIQSHPSI

Query:  FNSINQILHNSS
        FNSIN+ILHNSS
Subjt:  FNSINQILHNSS

A0A1S3BEE9 transcription factor bHLH522.2e-11572.41Show/hide
Query:  MAALTFYSNFYS-DPSSYYHQFNYFSPEFSPDLCYFPPPQLLPDPTAFDYVHDSVLYPTTAAPFYDDAFPLPFSDAYSYFSAPAIDQLIPVSADFFSCDE
        MAALTF+SNFYS DPSSY+H   YFSPEFSPDL Y PPP LL DP AF YV DSV YP     F DDAFP  FSDAY YFSAP++D+ +PVS+ FF  DE
Subjt:  MAALTFYSNFYS-DPSSYYHQFNYFSPEFSPDLCYFPPPQLLPDPTAFDYVHDSVLYPTTAAPFYDDAFPLPFSDAYSYFSAPAIDQLIPVSADFFSCDE

Query:  LEFHCPKRQRVMLEQSFCFGDGGGGSNVGGGG-------GYFPPPPPPPPPPEFFLGPWDCRMDNGEMKNDGECLKTK---ASPTPTSNNLSAQTIAARE
         EFHCPKRQR + EQSFC G+G G  NVGGGG       G+F     PPP  EFF GPWD RMDN EM ND  CLK++   A P P+SNNLSAQTIAARE
Subjt:  LEFHCPKRQRVMLEQSFCFGDGGGGSNVGGGG-------GYFPPPPPPPPPPEFFLGPWDCRMDNGEMKNDGECLKTK---ASPTPTSNNLSAQTIAARE

Query:  RRRKITAKTQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQVAILQLKQETEHEQEEE----KTKDLQILESTIIQEKLYTEEKCLIPKGFVQNLANFPE
        RRRKIT KTQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQVAILQLKQETE EQE+E    +T++L+ILEST+IQEKLY EEKCL+PKGF+QNLA+FPE
Subjt:  RRRKITAKTQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQVAILQLKQETEHEQEEE----KTKDLQILESTIIQEKLYTEEKCLIPKGFVQNLANFPE

Query:  IQSHPSIFNSINQILHNSS
        IQSHPSIFNSIN+ILHN+S
Subjt:  IQSHPSIFNSINQILHNSS

A0A5A7U090 Transcription factor bHLH522.2e-11572.41Show/hide
Query:  MAALTFYSNFYS-DPSSYYHQFNYFSPEFSPDLCYFPPPQLLPDPTAFDYVHDSVLYPTTAAPFYDDAFPLPFSDAYSYFSAPAIDQLIPVSADFFSCDE
        MAALTF+SNFYS DPSSY+H   YFSPEFSPDL Y PPP LL DP AF YV DSV YP     F DDAFP  FSDAY YFSAP++D+ +PVS+ FF  DE
Subjt:  MAALTFYSNFYS-DPSSYYHQFNYFSPEFSPDLCYFPPPQLLPDPTAFDYVHDSVLYPTTAAPFYDDAFPLPFSDAYSYFSAPAIDQLIPVSADFFSCDE

Query:  LEFHCPKRQRVMLEQSFCFGDGGGGSNVGGGG-------GYFPPPPPPPPPPEFFLGPWDCRMDNGEMKNDGECLKTK---ASPTPTSNNLSAQTIAARE
         EFHCPKRQR + EQSFC G+G G  NVGGGG       G+F     PPP  EFF GPWD RMDN EM ND  CLK++   A P P+SNNLSAQTIAARE
Subjt:  LEFHCPKRQRVMLEQSFCFGDGGGGSNVGGGG-------GYFPPPPPPPPPPEFFLGPWDCRMDNGEMKNDGECLKTK---ASPTPTSNNLSAQTIAARE

Query:  RRRKITAKTQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQVAILQLKQETEHEQEEE----KTKDLQILESTIIQEKLYTEEKCLIPKGFVQNLANFPE
        RRRKIT KTQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQVAILQLKQETE EQE+E    +T++L+ILEST+IQEKLY EEKCL+PKGF+QNLA+FPE
Subjt:  RRRKITAKTQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQVAILQLKQETEHEQEEE----KTKDLQILESTIIQEKLYTEEKCLIPKGFVQNLANFPE

Query:  IQSHPSIFNSINQILHNSS
        IQSHPSIFNSIN+ILHN+S
Subjt:  IQSHPSIFNSINQILHNSS

A0A6J1EGS4 transcription factor bHLH52-like7.2e-11471.15Show/hide
Query:  MAALTFYSNFYSDPSSYYHQFNYFSPEFSPDLCYFPPPQLLPDPTAFDYVH----DSVLYPTTAAPFYDDAFPLPFSDAYSYFSAPAIDQLIPVSADFFS
        MAAL+FYSNF SDPSSY+HQF+ FSPE SP+L + PPPQLLPDP AFDY+H     SV +PT  APF+DD  P  FSD Y YF  PA+D  +PVSA+FF 
Subjt:  MAALTFYSNFYSDPSSYYHQFNYFSPEFSPDLCYFPPPQLLPDPTAFDYVH----DSVLYPTTAAPFYDDAFPLPFSDAYSYFSAPAIDQLIPVSADFFS

Query:  CDELEFHCPKRQRVMLEQSFCFGDGGGGSNVGGGGGYFPPPPPPPPPPEFFLGPWDCRMDNGEMKNDGECLKTKAS----PTPTSNNLSAQTIAARERRR
        CDE EF+CPKRQRV++EQSFC+  GGGG NVGG GGYF       P PEFF   WD R+ N E+ N G+CLK   +    P P+SNNLSAQTIAARERRR
Subjt:  CDELEFHCPKRQRVMLEQSFCFGDGGGGSNVGGGGGYFPPPPPPPPPPEFFLGPWDCRMDNGEMKNDGECLKTKAS----PTPTSNNLSAQTIAARERRR

Query:  KITAKTQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQVAILQLKQETEHEQEEEKTKDLQILESTIIQEKLYTEEKCLIPKGFVQNLANFPEIQSHPSI
        KITAKTQELGELVPGGSKMNTAEML+SAFKYVKFLQAQVAILQ+KQETE EQE  +T+DLQILEST+IQEKLY EEKCL+PKGFVQNL N PEIQS+PSI
Subjt:  KITAKTQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQVAILQLKQETEHEQEEEKTKDLQILESTIIQEKLYTEEKCLIPKGFVQNLANFPEIQSHPSI

Query:  FNSINQILHNSS
         NSINQILH +S
Subjt:  FNSINQILHNSS

A0A6J1KJ69 transcription factor bHLH521.2e-11370.89Show/hide
Query:  MAALTFYSNFYSDPSSYYHQFNYFSPEFSPDLCYFPPPQLLPDPTAFDY----VHDSVLYPTTAAPFYDDAFPLPFSDAYSYFSAPAIDQLIPVSADFFS
        MAAL+FYSNF SDPSSY+HQF+ FSPE SP+L + PPPQLLPDPT FDY    V  SV +PT  APF+DD  P  FSD Y YF  PA+D+ +PVSA+FF 
Subjt:  MAALTFYSNFYSDPSSYYHQFNYFSPEFSPDLCYFPPPQLLPDPTAFDY----VHDSVLYPTTAAPFYDDAFPLPFSDAYSYFSAPAIDQLIPVSADFFS

Query:  CDELEFHCPKRQRVMLEQSFCFGDGGGGSNVGGGGGYFPPPPPPPPPPEFFLGPWDCRMDNGEMKNDGECLK--------TKASPTPTSNNLSAQTIAAR
        CDE EF+CPKRQRV++EQSFC+  GGGG NVGG GGYF       P PEFF   WD R+ N EM N G+CLK           SP+P+SNNLSAQTIAAR
Subjt:  CDELEFHCPKRQRVMLEQSFCFGDGGGGSNVGGGGGYFPPPPPPPPPPEFFLGPWDCRMDNGEMKNDGECLK--------TKASPTPTSNNLSAQTIAAR

Query:  ERRRKITAKTQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQVAILQLKQETEHEQEEEKTKDLQILESTIIQEKLYTEEKCLIPKGFVQNLANFPEIQS
        ERRRKITAKTQELGELVPGGSKMNTAEML+SAFKYVKFLQAQVAILQ+KQETE EQE+ +T+DLQILEST+IQEKLY EEKCL+PKGFVQNLAN  EIQS
Subjt:  ERRRKITAKTQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQVAILQLKQETEHEQEEEKTKDLQILESTIIQEKLYTEEKCLIPKGFVQNLANFPEIQS

Query:  HPSIFNSINQILHNSS
        +PSI NSINQILH +S
Subjt:  HPSIFNSINQILHNSS

SwissProt top hitse value%identityAlignment
O81313 Transcription factor IND1.1e-0747.76Show/hide
Query:  PTPTSNNL----SAQTIAARERRRKITAKTQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQVAILQ
        P P   N+      QT+ AR RR +I+ K + L  +VPGG+KM+TA ML+ A +Y KFL+ QV ILQ
Subjt:  PTPTSNNL----SAQTIAARERRRKITAKTQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQVAILQ

Q84RD0 Transcription factor bHLH531.2e-2034.56Show/hide
Query:  DPSSYYHQFNYFSPEFSPDLCYFPP-PQLLPDPTAFDYVHDSVLYPTTAAPFYDDAFPL-----PFSDAYSYFSAPAIDQLIPVSADFFSCDELEFH--C
        D  SY+  FNY  P    D C+ P    ++P+  +F +     L      P + +  P      PF D   + S   I    P +  F    +L+F    
Subjt:  DPSSYYHQFNYFSPEFSPDLCYFPP-PQLLPDPTAFDYVHDSVLYPTTAAPFYDDAFPL-----PFSDAYSYFSAPAIDQLIPVSADFFSCDELEFH--C

Query:  PKRQRVMLEQSFCFGDGGGGSNVGGGGGYFPPPPPPPPPPEFFLGPWDCRMDNGEMKNDGECLKTKASPTPTSN--NLSAQTIAARERRRKITAKTQELG
        PKRQR++     C       S       +F P       PE       C      + +     K        S    LS+Q+IAAR RRR+I  KT ELG
Subjt:  PKRQRVMLEQSFCFGDGGGGSNVGGGGGYFPPPPPPPPPPEFFLGPWDCRMDNGEMKNDGECLKTKASPTPTSN--NLSAQTIAARERRRKITAKTQELG

Query:  ELVPGGSKMNTAEMLNSAFKYVKFLQAQVAILQLKQETEHEQEEEKTKDLQILESTIIQEKLYTEEKCLIPKGFVQNLANFPEIQSHPSIFNSINQIL
        +L+PGG+K+NTAEM  +A KYVKFLQ+QV ILQL Q T+      + +   +LES  IQEKL TEE CL+P   VQ+L     I   P+I   IN++L
Subjt:  ELVPGGSKMNTAEMLNSAFKYVKFLQAQVAILQLKQETEHEQEEEKTKDLQILESTIIQEKLYTEEKCLIPKGFVQNLANFPEIQSHPSIFNSINQIL

Q8S3D2 Transcription factor bHLH878.7e-0856.6Show/hide
Query:  QTIAARERRRKITAKTQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQVAILQ
        QT+AAR+RR +I+ K + L  LVPGG+KM+TA ML+ A  Y+KFL+AQV  L+
Subjt:  QTIAARERRRKITAKTQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQVAILQ

Q9C707 Transcription factor RHD63.3e-0744.62Show/hide
Query:  KASPTPTSNNLSAQTIAARERRRKITAKTQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQVAIL
        K  P PT++    Q++AA+ RR +I+ + + L ELVP G+K++   ML  A  YVKFLQ QV +L
Subjt:  KASPTPTSNNLSAQTIAARERRRKITAKTQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQVAIL

Q9SA82 Transcription factor bHLH529.6e-2339.37Show/hide
Query:  PVSADFFSCDELE-FHCPKRQRVMLEQSFCFGDGGGGSNVGGGGGYFPPPPPPPPPPEFFLGPWDCRMDN------GEMKNDGECLKTKASPTPTSNNLS
        P +  F    EL+ FH PK Q+ +++ SF F                  P  P P   + L  +     N       +  +  +   T+   T     LS
Subjt:  PVSADFFSCDELE-FHCPKRQRVMLEQSFCFGDGGGGSNVGGGGGYFPPPPPPPPPPEFFLGPWDCRMDN------GEMKNDGECLKTKASPTPTSNNLS

Query:  AQTIAARERRRKITAKTQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQVAILQLKQETEHEQEEEKT-KDLQ-ILESTIIQEKLYTEEKCLIPKGFVQN
        AQ+IAAR+RRR+IT KTQELG+L+PG  K NTAEM N+A KYVKFLQAQ+ ILQLKQ      +  K  +++Q +L S  IQEKL TEE C++P+  VQ 
Subjt:  AQTIAARERRRKITAKTQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQVAILQLKQETEHEQEEEKT-KDLQ-ILESTIIQEKLYTEEKCLIPKGFVQN

Query:  LANFPEIQSHPSIFNSINQIL
        L     I ++P I   IN++L
Subjt:  LANFPEIQSHPSIFNSINQIL

Arabidopsis top hitse value%identityAlignment
AT1G30670.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein6.8e-2439.37Show/hide
Query:  PVSADFFSCDELE-FHCPKRQRVMLEQSFCFGDGGGGSNVGGGGGYFPPPPPPPPPPEFFLGPWDCRMDN------GEMKNDGECLKTKASPTPTSNNLS
        P +  F    EL+ FH PK Q+ +++ SF F                  P  P P   + L  +     N       +  +  +   T+   T     LS
Subjt:  PVSADFFSCDELE-FHCPKRQRVMLEQSFCFGDGGGGSNVGGGGGYFPPPPPPPPPPEFFLGPWDCRMDN------GEMKNDGECLKTKASPTPTSNNLS

Query:  AQTIAARERRRKITAKTQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQVAILQLKQETEHEQEEEKT-KDLQ-ILESTIIQEKLYTEEKCLIPKGFVQN
        AQ+IAAR+RRR+IT KTQELG+L+PG  K NTAEM N+A KYVKFLQAQ+ ILQLKQ      +  K  +++Q +L S  IQEKL TEE C++P+  VQ 
Subjt:  AQTIAARERRRKITAKTQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQVAILQLKQETEHEQEEEKT-KDLQ-ILESTIIQEKLYTEEKCLIPKGFVQN

Query:  LANFPEIQSHPSIFNSINQIL
        L     I ++P I   IN++L
Subjt:  LANFPEIQSHPSIFNSINQIL

AT1G66470.1 ROOT HAIR DEFECTIVE62.3e-0844.62Show/hide
Query:  KASPTPTSNNLSAQTIAARERRRKITAKTQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQVAIL
        K  P PT++    Q++AA+ RR +I+ + + L ELVP G+K++   ML  A  YVKFLQ QV +L
Subjt:  KASPTPTSNNLSAQTIAARERRRKITAKTQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQVAIL

AT2G34820.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein8.3e-2234.56Show/hide
Query:  DPSSYYHQFNYFSPEFSPDLCYFPP-PQLLPDPTAFDYVHDSVLYPTTAAPFYDDAFPL-----PFSDAYSYFSAPAIDQLIPVSADFFSCDELEFH--C
        D  SY+  FNY  P    D C+ P    ++P+  +F +     L      P + +  P      PF D   + S   I    P +  F    +L+F    
Subjt:  DPSSYYHQFNYFSPEFSPDLCYFPP-PQLLPDPTAFDYVHDSVLYPTTAAPFYDDAFPL-----PFSDAYSYFSAPAIDQLIPVSADFFSCDELEFH--C

Query:  PKRQRVMLEQSFCFGDGGGGSNVGGGGGYFPPPPPPPPPPEFFLGPWDCRMDNGEMKNDGECLKTKASPTPTSN--NLSAQTIAARERRRKITAKTQELG
        PKRQR++     C       S       +F P       PE       C      + +     K        S    LS+Q+IAAR RRR+I  KT ELG
Subjt:  PKRQRVMLEQSFCFGDGGGGSNVGGGGGYFPPPPPPPPPPEFFLGPWDCRMDNGEMKNDGECLKTKASPTPTSN--NLSAQTIAARERRRKITAKTQELG

Query:  ELVPGGSKMNTAEMLNSAFKYVKFLQAQVAILQLKQETEHEQEEEKTKDLQILESTIIQEKLYTEEKCLIPKGFVQNLANFPEIQSHPSIFNSINQIL
        +L+PGG+K+NTAEM  +A KYVKFLQ+QV ILQL Q T+      + +   +LES  IQEKL TEE CL+P   VQ+L     I   P+I   IN++L
Subjt:  ELVPGGSKMNTAEMLNSAFKYVKFLQAQVAILQLKQETEHEQEEEKTKDLQILESTIIQEKLYTEEKCLIPKGFVQNLANFPEIQSHPSIFNSINQIL

AT3G21330.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein6.2e-0956.6Show/hide
Query:  QTIAARERRRKITAKTQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQVAILQ
        QT+AAR+RR +I+ K + L  LVPGG+KM+TA ML+ A  Y+KFL+AQV  L+
Subjt:  QTIAARERRRKITAKTQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQVAILQ

AT4G00120.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein8.1e-0947.76Show/hide
Query:  PTPTSNNL----SAQTIAARERRRKITAKTQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQVAILQ
        P P   N+      QT+ AR RR +I+ K + L  +VPGG+KM+TA ML+ A +Y KFL+ QV ILQ
Subjt:  PTPTSNNL----SAQTIAARERRRKITAKTQELGELVPGGSKMNTAEMLNSAFKYVKFLQAQVAILQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGCTCTCACCTTTTACTCCAATTTCTACTCTGACCCTTCTTCATATTATCACCAATTCAACTATTTCTCCCCTGAATTCTCCCCGGACCTCTGTTATTTTCCTCC
GCCGCAGCTCCTCCCTGACCCTACCGCCTTCGATTACGTCCATGACTCTGTTTTATACCCCACCACTGCTGCTCCATTCTACGATGATGCCTTTCCTTTGCCCTTTTCCG
ATGCCTACTCCTACTTCTCCGCTCCCGCCATCGACCAATTGATTCCCGTCTCGGCCGACTTCTTCTCTTGTGATGAACTTGAGTTTCATTGCCCCAAACGTCAGAGGGTT
ATGTTGGAACAGAGCTTTTGTTTCGGTGACGGTGGCGGTGGCAGTAATGTAGGTGGTGGAGGAGGCTACTTTCCTCCTCCTCCTCCTCCTCCTCCTCCGCCGGAGTTTTT
TTTGGGTCCGTGGGATTGTAGAATGGACAATGGGGAAATGAAGAATGATGGTGAATGTTTGAAGACTAAAGCGTCACCCACGCCAACGAGTAATAACTTATCAGCGCAGA
CGATTGCGGCTCGGGAACGGCGGAGGAAGATAACGGCAAAGACGCAGGAGCTCGGAGAGCTGGTTCCGGGCGGGAGTAAGATGAATACTGCCGAAATGCTGAATTCTGCT
TTCAAATATGTTAAATTCTTGCAAGCCCAAGTTGCTATTTTGCAACTCAAGCAAGAAACAGAGCATGAACAAGAAGAGGAAAAAACAAAGGATCTTCAGATTCTTGAATC
CACAATAATTCAAGAGAAGTTATACACAGAAGAAAAGTGTTTGATTCCAAAAGGATTTGTCCAAAATCTTGCCAATTTTCCTGAGATTCAATCGCATCCGTCCATTTTCA
ACTCCATCAATCAGATCCTTCACAACAGCAGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGCTCTCACCTTTTACTCCAATTTCTACTCTGACCCTTCTTCATATTATCACCAATTCAACTATTTCTCCCCTGAATTCTCCCCGGACCTCTGTTATTTTCCTCC
GCCGCAGCTCCTCCCTGACCCTACCGCCTTCGATTACGTCCATGACTCTGTTTTATACCCCACCACTGCTGCTCCATTCTACGATGATGCCTTTCCTTTGCCCTTTTCCG
ATGCCTACTCCTACTTCTCCGCTCCCGCCATCGACCAATTGATTCCCGTCTCGGCCGACTTCTTCTCTTGTGATGAACTTGAGTTTCATTGCCCCAAACGTCAGAGGGTT
ATGTTGGAACAGAGCTTTTGTTTCGGTGACGGTGGCGGTGGCAGTAATGTAGGTGGTGGAGGAGGCTACTTTCCTCCTCCTCCTCCTCCTCCTCCTCCGCCGGAGTTTTT
TTTGGGTCCGTGGGATTGTAGAATGGACAATGGGGAAATGAAGAATGATGGTGAATGTTTGAAGACTAAAGCGTCACCCACGCCAACGAGTAATAACTTATCAGCGCAGA
CGATTGCGGCTCGGGAACGGCGGAGGAAGATAACGGCAAAGACGCAGGAGCTCGGAGAGCTGGTTCCGGGCGGGAGTAAGATGAATACTGCCGAAATGCTGAATTCTGCT
TTCAAATATGTTAAATTCTTGCAAGCCCAAGTTGCTATTTTGCAACTCAAGCAAGAAACAGAGCATGAACAAGAAGAGGAAAAAACAAAGGATCTTCAGATTCTTGAATC
CACAATAATTCAAGAGAAGTTATACACAGAAGAAAAGTGTTTGATTCCAAAAGGATTTGTCCAAAATCTTGCCAATTTTCCTGAGATTCAATCGCATCCGTCCATTTTCA
ACTCCATCAATCAGATCCTTCACAACAGCAGCTAA
Protein sequenceShow/hide protein sequence
MAALTFYSNFYSDPSSYYHQFNYFSPEFSPDLCYFPPPQLLPDPTAFDYVHDSVLYPTTAAPFYDDAFPLPFSDAYSYFSAPAIDQLIPVSADFFSCDELEFHCPKRQRV
MLEQSFCFGDGGGGSNVGGGGGYFPPPPPPPPPPEFFLGPWDCRMDNGEMKNDGECLKTKASPTPTSNNLSAQTIAARERRRKITAKTQELGELVPGGSKMNTAEMLNSA
FKYVKFLQAQVAILQLKQETEHEQEEEKTKDLQILESTIIQEKLYTEEKCLIPKGFVQNLANFPEIQSHPSIFNSINQILHNSS