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Clc03G09083 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc03G09083
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionHeat shock protein DnaJ with tetratricopeptide repeat
Genome locationClcChr03:9770789..9771094
RNA-Seq ExpressionClc03G09083
SyntenyClc03G09083
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044409.1 Heat shock protein DnaJ with tetratricopeptide repeat isoform 1 [Cucumis melo var. makuwa]3.9e-1076.19Show/hide
Query:  HDLFDCLHDLEHLKLFYKSILKCRKLPGPTWKHHNVQYSEIP
        H L DCLHDLEHLKL Y SIL+ RKLPGP WK HNV+Y EIP
Subjt:  HDLFDCLHDLEHLKLFYKSILKCRKLPGPTWKHHNVQYSEIP

XP_008454300.1 PREDICTED: uncharacterized protein LOC103494740 [Cucumis melo]3.9e-1076.19Show/hide
Query:  HDLFDCLHDLEHLKLFYKSILKCRKLPGPTWKHHNVQYSEIP
        H L DCLHDLEHLKL Y SIL+ RKLPGP WK HNV+Y EIP
Subjt:  HDLFDCLHDLEHLKLFYKSILKCRKLPGPTWKHHNVQYSEIP

XP_038995852.1 uncharacterized protein LOC120120243 isoform X1 [Hibiscus syriacus]8.6e-1078.95Show/hide
Query:  DCLHDLEHLKLFYKSILKCRKLPGPTWKHHNVQYSEIP
        DCLHD EHLKL Y SIL+ RKLPGP WKHHNV+Y EIP
Subjt:  DCLHDLEHLKLFYKSILKCRKLPGPTWKHHNVQYSEIP

XP_038995854.1 uncharacterized protein LOC120120243 isoform X2 [Hibiscus syriacus]8.6e-1078.95Show/hide
Query:  DCLHDLEHLKLFYKSILKCRKLPGPTWKHHNVQYSEIP
        DCLHD EHLKL Y SIL+ RKLPGP WKHHNV+Y EIP
Subjt:  DCLHDLEHLKLFYKSILKCRKLPGPTWKHHNVQYSEIP

XP_039027284.1 uncharacterized protein LOC120161050 [Hibiscus syriacus]2.3e-1078.57Show/hide
Query:  HDLFDCLHDLEHLKLFYKSILKCRKLPGPTWKHHNVQYSEIP
        H L DCLHDLEHLKL Y SIL+ RKLPGPTWK HNV+Y EIP
Subjt:  HDLFDCLHDLEHLKLFYKSILKCRKLPGPTWKHHNVQYSEIP

TrEMBL top hitse value%identityAlignment
A0A1S3BXS6 uncharacterized protein LOC1034947401.9e-1076.19Show/hide
Query:  HDLFDCLHDLEHLKLFYKSILKCRKLPGPTWKHHNVQYSEIP
        H L DCLHDLEHLKL Y SIL+ RKLPGP WK HNV+Y EIP
Subjt:  HDLFDCLHDLEHLKLFYKSILKCRKLPGPTWKHHNVQYSEIP

A0A540K6Y7 Uncharacterized protein4.2e-1064.81Show/hide
Query:  DCLHDLEHLKLFYKSILKCRKLPGPTWKHHNVQYSEIPSNYQGTCLFSLTKSEQ
        DCLHDLEHLKL Y SIL+ RKLPGP WK HNV+Y EIP      CL + TK++Q
Subjt:  DCLHDLEHLKLFYKSILKCRKLPGPTWKHHNVQYSEIPSNYQGTCLFSLTKSEQ

A0A5D3E0U9 Heat shock protein DnaJ with tetratricopeptide repeat isoform 11.9e-1076.19Show/hide
Query:  HDLFDCLHDLEHLKLFYKSILKCRKLPGPTWKHHNVQYSEIP
        H L DCLHDLEHLKL Y SIL+ RKLPGP WK HNV+Y EIP
Subjt:  HDLFDCLHDLEHLKLFYKSILKCRKLPGPTWKHHNVQYSEIP

A0A6A2XV72 Putative DNA replication regulator dpb111.1e-1078.57Show/hide
Query:  HDLFDCLHDLEHLKLFYKSILKCRKLPGPTWKHHNVQYSEIP
        H L DCLHDLEHLKL Y SIL+ RKLPGPTWK HNV+Y EIP
Subjt:  HDLFDCLHDLEHLKLFYKSILKCRKLPGPTWKHHNVQYSEIP

A0A6A3AYE3 Uncharacterized protein4.2e-1078.95Show/hide
Query:  DCLHDLEHLKLFYKSILKCRKLPGPTWKHHNVQYSEIP
        DCLHD EHLKL Y SIL+ RKLPGP WKHHNV+Y EIP
Subjt:  DCLHDLEHLKLFYKSILKCRKLPGPTWKHHNVQYSEIP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G02650.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.4e-1047.83Show/hide
Query:  ECDTIVALPQPRKAPPSSLHHDLF-------DCLHDLEHLKLFYKSILKCRKLPGPTWKHHNVQYSEIP
        +C+ I+AL +P          +LF       D LHDLEHLKL + SIL+ R L GP WK HNV+Y EIP
Subjt:  ECDTIVALPQPRKAPPSSLHHDLF-------DCLHDLEHLKLFYKSILKCRKLPGPTWKHHNVQYSEIP

AT2G47440.1 Tetratricopeptide repeat (TPR)-like superfamily protein9.8e-1273.68Show/hide
Query:  DCLHDLEHLKLFYKSILKCRKLPGPTWKHHNVQYSEIP
        D LHDLEHLKL Y +IL+ RKLPGP WK HNV+Y EIP
Subjt:  DCLHDLEHLKLFYKSILKCRKLPGPTWKHHNVQYSEIP

AT3G62570.1 Tetratricopeptide repeat (TPR)-like superfamily protein2.2e-1171.05Show/hide
Query:  DCLHDLEHLKLFYKSILKCRKLPGPTWKHHNVQYSEIP
        D LHDLEHLK+ Y +IL+ RKLPGP WK HNV+Y EIP
Subjt:  DCLHDLEHLKLFYKSILKCRKLPGPTWKHHNVQYSEIP

AT4G02100.1 Heat shock protein DnaJ with tetratricopeptide repeat4.4e-1276.32Show/hide
Query:  DCLHDLEHLKLFYKSILKCRKLPGPTWKHHNVQYSEIP
        D LHDLEHLKL Y SIL+ RKLPGP WK HNV+Y EIP
Subjt:  DCLHDLEHLKLFYKSILKCRKLPGPTWKHHNVQYSEIP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCAAAAAAGCACCAACATGTCCACGCGACGACTTCTCTTCCAATCCTTTTGACCACCACCGTCGAATGTGACACCATCGTCGCCCTTCCTCAGCCACGTAAA
GCTCCTCCTTCATCATTGCACCACGACCTCTTTGATTGCCTTCACGACCTCGAACATTTGAAGCTCTTCTACAAGTCAATATTGAAATGTCGAAAGCTTCCTGGT
CCAACATGGAAGCACCATAATGTGCAGTATAGTGAAATCCCAAGTAACTATCAAGGTACTTGTCTTTTCTCCCTCACAAAATCAGAGCAAAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCAAAAAAGCACCAACATGTCCACGCGACGACTTCTCTTCCAATCCTTTTGACCACCACCGTCGAATGTGACACCATCGTCGCCCTTCCTCAGCCACGTAAA
GCTCCTCCTTCATCATTGCACCACGACCTCTTTGATTGCCTTCACGACCTCGAACATTTGAAGCTCTTCTACAAGTCAATATTGAAATGTCGAAAGCTTCCTGGT
CCAACATGGAAGCACCATAATGTGCAGTATAGTGAAATCCCAAGTAACTATCAAGGTACTTGTCTTTTCTCCCTCACAAAATCAGAGCAAAATTAG
Protein sequenceShow/hide protein sequence
MPKKHQHVHATTSLPILLTTTVECDTIVALPQPRKAPPSSLHHDLFDCLHDLEHLKLFYKSILKCRKLPGPTWKHHNVQYSEIPSNYQGTCLFSLTKSEQN