; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc03G09620 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc03G09620
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr03:11537427..11538147
RNA-Seq ExpressionClc03G09620
SyntenyClc03G09620
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004140323.1 uncharacterized protein LOC101218772 [Cucumis sativus]5.0e-6174.86Show/hide
Query:  MQSHTNNNQTLAQKQGVIITVYVESPKLQNNNSNKTSIIPH---NNINPNATLPQTHNSKGYDRRAQLLAYSRHLRNVDSSLSQSPEPKSKATFSFTLLF
        MQSHTNN QTL +KQ VIITVYVESPKLQN+N +KT I+PH   NN NP  +L +T NS GYDRRAQLLAYSRHLRNV SS +QSP+PKSK         
Subjt:  MQSHTNNNQTLAQKQGVIITVYVESPKLQNNNSNKTSIIPH---NNINPNATLPQTHNSKGYDRRAQLLAYSRHLRNVDSSLSQSPEPKSKATFSFTLLF

Query:  FFLRSEAPGVRRLPSRRALHRWKYERVGMMREERREVVDQPCRPKCLGGRSNKKSTGKSSSSTFRKLKSLLGELSKGCK
        + +RSEAP VRR+PSRRAL RW+YERVGMMREER EVVDQPCRPKCLGGRSNKKST +S SS FRKLKSLLGELSKGCK
Subjt:  FFLRSEAPGVRRLPSRRALHRWKYERVGMMREERREVVDQPCRPKCLGGRSNKKSTGKSSSSTFRKLKSLLGELSKGCK

XP_008460454.1 PREDICTED: uncharacterized protein LOC103499268 [Cucumis melo]1.1e-6377.09Show/hide
Query:  MQSHTNNNQTLAQKQGVIITVYVESPKLQNNNSNKTSIIPHNN---INPNATLPQTHNSKGYDRRAQLLAYSRHLRNVDSSLSQSPEPKSKATFSFTLLF
        MQSHTNN QTL +KQ VIITVYVESPKLQN+NS+KT IIPHNN   INP  +LP+T NS GYDRRAQLLAYSRHLRNV SS +QSP+PKSK         
Subjt:  MQSHTNNNQTLAQKQGVIITVYVESPKLQNNNSNKTSIIPHNN---INPNATLPQTHNSKGYDRRAQLLAYSRHLRNVDSSLSQSPEPKSKATFSFTLLF

Query:  FFLRSEAPGVRRLPSRRALHRWKYERVGMMREERREVVDQPCRPKCLGGRSNKKSTGKSSSSTFRKLKSLLGELSKGCK
        + +RSEAP VRR+PSRRAL RW+YERVGMMREER EVVDQPCRPKCLGGRSNKKST +S SS FRKLKSLLGELSKGCK
Subjt:  FFLRSEAPGVRRLPSRRALHRWKYERVGMMREERREVVDQPCRPKCLGGRSNKKSTGKSSSSTFRKLKSLLGELSKGCK

XP_022962296.1 uncharacterized protein LOC111462789 [Cucurbita moschata]6.1e-3553.37Show/hide
Query:  MQSHTNNNQ--TLAQKQGVIITVYVESPKLQNNNSNKTSIIPHNNINPNATLPQTHNSKGYDRRAQLLAYSRHLRNVDSSLSQSPEPKSKATFSFTLLFF
        M+  TN N+   +  K+ VIITVYVESP+ Q+N S++  I  + N +PNA  P+   S+GYDRRA+LLAYSR LRNVDS+ +  P+ KSK         +
Subjt:  MQSHTNNNQ--TLAQKQGVIITVYVESPKLQNNNSNKTSIIPHNNINPNATLPQTHNSKGYDRRAQLLAYSRHLRNVDSSLSQSPEPKSKATFSFTLLFF

Query:  FLRSEAPGVRRLPSRRALHRWKYERVGMMREERREVVDQPCRPKCLGGRSNKKSTGKSSSSTFRKLKSLLGELSKGCK
         ++SE   VRRLPSRR L + +YERVGMMREER EVV+Q C PKC  G   K+S+G+  SS  RKLKSL+G LS GCK
Subjt:  FLRSEAPGVRRLPSRRALHRWKYERVGMMREERREVVDQPCRPKCLGGRSNKKSTGKSSSSTFRKLKSLLGELSKGCK

XP_022990178.1 uncharacterized protein LOC111487148 [Cucurbita maxima]7.2e-3653.37Show/hide
Query:  MQSHTNNNQ--TLAQKQGVIITVYVESPKLQNNNSNKTSIIPHNNINPNATLPQTHNSKGYDRRAQLLAYSRHLRNVDSSLSQSPEPKSKATFSFTLLFF
        M+  TN N+   +  K+ VIITVYVESP+ Q+N S++  I  + N +PNA  P+   S+GYDRRA+LLAYSR LRNVDS+ +  P+ KSK         +
Subjt:  MQSHTNNNQ--TLAQKQGVIITVYVESPKLQNNNSNKTSIIPHNNINPNATLPQTHNSKGYDRRAQLLAYSRHLRNVDSSLSQSPEPKSKATFSFTLLFF

Query:  FLRSEAPGVRRLPSRRALHRWKYERVGMMREERREVVDQPCRPKCLGGRSNKKSTGKSSSSTFRKLKSLLGELSKGCK
         ++SE   VRR+PSRR L + +YERVGMMREER EVV+Q C PKC  G  +K+S+G+  SS  RKLKSL+G LSKGCK
Subjt:  FLRSEAPGVRRLPSRRALHRWKYERVGMMREERREVVDQPCRPKCLGGRSNKKSTGKSSSSTFRKLKSLLGELSKGCK

XP_038874461.1 uncharacterized protein LOC120067113 [Benincasa hispida]1.7e-6175.14Show/hide
Query:  MQSHTNNNQTLAQKQGVIITVYVESPKLQNNNSNKTSIIPHNNI-NPNATLPQTHNSKGYDRRAQLLAYSRHLRNVDSSLSQSPEPKSKATFSFTLLFFF
        MQ+HTNNNQT+ QKQGVIITVYVESPKLQ+NNS+K  IIPHNNI NPN+ LP+T NS GYDRRAQLLAYSRHLRN +SSLSQS + +SK         + 
Subjt:  MQSHTNNNQTLAQKQGVIITVYVESPKLQNNNSNKTSIIPHNNI-NPNATLPQTHNSKGYDRRAQLLAYSRHLRNVDSSLSQSPEPKSKATFSFTLLFFF

Query:  LRSEAPGVRRLPSRRALHRWKYERVGMMREERREVVDQPCRPKCLGGRSNKKSTGKSSSSTFRKLKSLLGELSKGCK
        +RSEAP VRR+PSRRAL RW+YERVGMMREE  EVVDQPCRPKC GG+S+KKST KS SS FRKLKSLLGELS GCK
Subjt:  LRSEAPGVRRLPSRRALHRWKYERVGMMREERREVVDQPCRPKCLGGRSNKKSTGKSSSSTFRKLKSLLGELSKGCK

TrEMBL top hitse value%identityAlignment
A0A0A0KN34 Uncharacterized protein2.4e-6174.86Show/hide
Query:  MQSHTNNNQTLAQKQGVIITVYVESPKLQNNNSNKTSIIPH---NNINPNATLPQTHNSKGYDRRAQLLAYSRHLRNVDSSLSQSPEPKSKATFSFTLLF
        MQSHTNN QTL +KQ VIITVYVESPKLQN+N +KT I+PH   NN NP  +L +T NS GYDRRAQLLAYSRHLRNV SS +QSP+PKSK         
Subjt:  MQSHTNNNQTLAQKQGVIITVYVESPKLQNNNSNKTSIIPH---NNINPNATLPQTHNSKGYDRRAQLLAYSRHLRNVDSSLSQSPEPKSKATFSFTLLF

Query:  FFLRSEAPGVRRLPSRRALHRWKYERVGMMREERREVVDQPCRPKCLGGRSNKKSTGKSSSSTFRKLKSLLGELSKGCK
        + +RSEAP VRR+PSRRAL RW+YERVGMMREER EVVDQPCRPKCLGGRSNKKST +S SS FRKLKSLLGELSKGCK
Subjt:  FFLRSEAPGVRRLPSRRALHRWKYERVGMMREERREVVDQPCRPKCLGGRSNKKSTGKSSSSTFRKLKSLLGELSKGCK

A0A1S3CDS3 uncharacterized protein LOC1034992685.2e-6477.09Show/hide
Query:  MQSHTNNNQTLAQKQGVIITVYVESPKLQNNNSNKTSIIPHNN---INPNATLPQTHNSKGYDRRAQLLAYSRHLRNVDSSLSQSPEPKSKATFSFTLLF
        MQSHTNN QTL +KQ VIITVYVESPKLQN+NS+KT IIPHNN   INP  +LP+T NS GYDRRAQLLAYSRHLRNV SS +QSP+PKSK         
Subjt:  MQSHTNNNQTLAQKQGVIITVYVESPKLQNNNSNKTSIIPHNN---INPNATLPQTHNSKGYDRRAQLLAYSRHLRNVDSSLSQSPEPKSKATFSFTLLF

Query:  FFLRSEAPGVRRLPSRRALHRWKYERVGMMREERREVVDQPCRPKCLGGRSNKKSTGKSSSSTFRKLKSLLGELSKGCK
        + +RSEAP VRR+PSRRAL RW+YERVGMMREER EVVDQPCRPKCLGGRSNKKST +S SS FRKLKSLLGELSKGCK
Subjt:  FFLRSEAPGVRRLPSRRALHRWKYERVGMMREERREVVDQPCRPKCLGGRSNKKSTGKSSSSTFRKLKSLLGELSKGCK

A0A6J1CJQ0 uncharacterized protein LOC1110119262.3e-2448.88Show/hide
Query:  MQSH-TNNNQTLAQKQGVIITVYVESPKLQNNNSNKTSIIPHNNINPNATLPQTHNSKGYDRRAQLLAYSRHLRNVDSSLSQSPEPKSKATFSFTLLFFF
        M+ H ++ N+T  +K GVIITVYVESPK  NN+         N INP +        +GYDRRAQLLAYSR LRN+DS L    +PK             
Subjt:  MQSH-TNNNQTLAQKQGVIITVYVESPKLQNNNSNKTSIIPHNNINPNATLPQTHNSKGYDRRAQLLAYSRHLRNVDSSLSQSPEPKSKATFSFTLLFFF

Query:  LRSEAPGVRRLPSRRALHRWKYERVGMMREERREVVDQPCRPKCLGGRS-NKKSTGKSSSSTFRKLKSLLGELSKGCK
        +RSE                +YERVGM RE+R EVVDQ CRPKC   +S  KK+TGKS SS   K+KSLL ELSKGCK
Subjt:  LRSEAPGVRRLPSRRALHRWKYERVGMMREERREVVDQPCRPKCLGGRS-NKKSTGKSSSSTFRKLKSLLGELSKGCK

A0A6J1HCQ4 uncharacterized protein LOC1114627893.0e-3553.37Show/hide
Query:  MQSHTNNNQ--TLAQKQGVIITVYVESPKLQNNNSNKTSIIPHNNINPNATLPQTHNSKGYDRRAQLLAYSRHLRNVDSSLSQSPEPKSKATFSFTLLFF
        M+  TN N+   +  K+ VIITVYVESP+ Q+N S++  I  + N +PNA  P+   S+GYDRRA+LLAYSR LRNVDS+ +  P+ KSK         +
Subjt:  MQSHTNNNQ--TLAQKQGVIITVYVESPKLQNNNSNKTSIIPHNNINPNATLPQTHNSKGYDRRAQLLAYSRHLRNVDSSLSQSPEPKSKATFSFTLLFF

Query:  FLRSEAPGVRRLPSRRALHRWKYERVGMMREERREVVDQPCRPKCLGGRSNKKSTGKSSSSTFRKLKSLLGELSKGCK
         ++SE   VRRLPSRR L + +YERVGMMREER EVV+Q C PKC  G   K+S+G+  SS  RKLKSL+G LS GCK
Subjt:  FLRSEAPGVRRLPSRRALHRWKYERVGMMREERREVVDQPCRPKCLGGRSNKKSTGKSSSSTFRKLKSLLGELSKGCK

A0A6J1JSH9 uncharacterized protein LOC1114871483.5e-3653.37Show/hide
Query:  MQSHTNNNQ--TLAQKQGVIITVYVESPKLQNNNSNKTSIIPHNNINPNATLPQTHNSKGYDRRAQLLAYSRHLRNVDSSLSQSPEPKSKATFSFTLLFF
        M+  TN N+   +  K+ VIITVYVESP+ Q+N S++  I  + N +PNA  P+   S+GYDRRA+LLAYSR LRNVDS+ +  P+ KSK         +
Subjt:  MQSHTNNNQ--TLAQKQGVIITVYVESPKLQNNNSNKTSIIPHNNINPNATLPQTHNSKGYDRRAQLLAYSRHLRNVDSSLSQSPEPKSKATFSFTLLFF

Query:  FLRSEAPGVRRLPSRRALHRWKYERVGMMREERREVVDQPCRPKCLGGRSNKKSTGKSSSSTFRKLKSLLGELSKGCK
         ++SE   VRR+PSRR L + +YERVGMMREER EVV+Q C PKC  G  +K+S+G+  SS  RKLKSL+G LSKGCK
Subjt:  FLRSEAPGVRRLPSRRALHRWKYERVGMMREERREVVDQPCRPKCLGGRSNKKSTGKSSSSTFRKLKSLLGELSKGCK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAAGCCACACAAATAACAACCAAACACTGGCCCAGAAACAAGGAGTAATCATCACTGTCTACGTTGAATCTCCAAAATTACAAAACAATAACTCCAATAAA
ACCTCCATTATTCCCCACAACAACATCAATCCAAACGCTACCCTTCCCCAAACCCACAATTCCAAAGGCTACGATCGTCGGGCTCAGCTTCTCGCCTACTCTCGC
CACCTCAGAAATGTCGATTCCTCTCTCTCCCAATCGCCCGAACCCAAATCCAAGGCAACTTTTTCCTTTACTCTTTTGTTCTTTTTTCTCCGATCGGAGGCACCG
GGGGTGCGGCGGCTGCCGTCGAGACGGGCACTGCACCGGTGGAAATATGAACGTGTTGGGATGATGAGAGAAGAGAGAAGAGAGGTGGTGGATCAGCCATGTCGG
CCCAAGTGCTTGGGTGGAAGAAGCAACAAGAAAAGCACTGGCAAATCGAGTTCTTCCACATTTAGGAAATTGAAGAGTTTGTTGGGAGAATTATCAAAGGGCTGC
AAACACTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAAAGCCACACAAATAACAACCAAACACTGGCCCAGAAACAAGGAGTAATCATCACTGTCTACGTTGAATCTCCAAAATTACAAAACAATAACTCCAATAAA
ACCTCCATTATTCCCCACAACAACATCAATCCAAACGCTACCCTTCCCCAAACCCACAATTCCAAAGGCTACGATCGTCGGGCTCAGCTTCTCGCCTACTCTCGC
CACCTCAGAAATGTCGATTCCTCTCTCTCCCAATCGCCCGAACCCAAATCCAAGGCAACTTTTTCCTTTACTCTTTTGTTCTTTTTTCTCCGATCGGAGGCACCG
GGGGTGCGGCGGCTGCCGTCGAGACGGGCACTGCACCGGTGGAAATATGAACGTGTTGGGATGATGAGAGAAGAGAGAAGAGAGGTGGTGGATCAGCCATGTCGG
CCCAAGTGCTTGGGTGGAAGAAGCAACAAGAAAAGCACTGGCAAATCGAGTTCTTCCACATTTAGGAAATTGAAGAGTTTGTTGGGAGAATTATCAAAGGGCTGC
AAACACTAG
Protein sequenceShow/hide protein sequence
MQSHTNNNQTLAQKQGVIITVYVESPKLQNNNSNKTSIIPHNNINPNATLPQTHNSKGYDRRAQLLAYSRHLRNVDSSLSQSPEPKSKATFSFTLLFFFLRSEAP
GVRRLPSRRALHRWKYERVGMMREERREVVDQPCRPKCLGGRSNKKSTGKSSSSTFRKLKSLLGELSKGCKH