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Clc03G11330 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc03G11330
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionprotein FAR1-RELATED SEQUENCE 4-like
Genome locationClcChr03:14734586..14737683
RNA-Seq ExpressionClc03G11330
SyntenyClc03G11330
Gene Ontology termsGO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022153200.1 uncharacterized protein LOC111020756 [Momordica charantia]3.6e-0571.79Show/hide
Query:  VEGDLLDSYAQLHAYGEALKIENPGTIFEIELEDSKYFK
        + GDL  SY  L AYGEALKI NPGTIFE+ELE  KYFK
Subjt:  VEGDLLDSYAQLHAYGEALKIENPGTIFEIELEDSKYFK

XP_038888098.1 uncharacterized protein LOC120078004 [Benincasa hispida]1.5e-0640Show/hide
Query:  MVPSTLNYSQLSATLYELSNVSSSEFNIIMRVKYKLDCECPPVCLMDDGDVRFLLSEMDHNRPPIFVNFEETNQE
        +VP TL Y +  A +Y ++NV+  EF+++MRVKYKLD E PP+ + +D DV   L   D +R  ++V  +  + E
Subjt:  MVPSTLNYSQLSATLYELSNVSSSEFNIIMRVKYKLDCECPPVCLMDDGDVRFLLSEMDHNRPPIFVNFEETNQE

XP_038891938.1 uncharacterized protein LOC120081277 isoform X1 [Benincasa hispida]2.5e-0640Show/hide
Query:  MVPSTLNYSQLSATLYELSNVSSSEFNIIMRVKYKLDCECPPVCLMDDGDVRFLLSEMDHNRPPIFVNFEETNQE
        +VP +L Y ++ + +Y ++NVSSSEF++I++VKYKL+ E PP  + +D  +RFLL   D +R  + V  +    E
Subjt:  MVPSTLNYSQLSATLYELSNVSSSEFNIIMRVKYKLDCECPPVCLMDDGDVRFLLSEMDHNRPPIFVNFEETNQE

XP_038891939.1 uncharacterized protein LOC120081277 isoform X2 [Benincasa hispida]2.5e-0640Show/hide
Query:  MVPSTLNYSQLSATLYELSNVSSSEFNIIMRVKYKLDCECPPVCLMDDGDVRFLLSEMDHNRPPIFVNFEETNQE
        +VP +L Y ++ + +Y ++NVSSSEF++I++VKYKL+ E PP  + +D  +RFLL   D +R  + V  +    E
Subjt:  MVPSTLNYSQLSATLYELSNVSSSEFNIIMRVKYKLDCECPPVCLMDDGDVRFLLSEMDHNRPPIFVNFEETNQE

XP_038904780.1 uncharacterized protein LOC120091048 [Benincasa hispida]1.7e-0744.3Show/hide
Query:  TLNYSQLSATLYELSNVSSSEFNIIMRVKYKLDCECPPVCLMDDGDVRFLLSEMDHNRPPIFVNFEETNQEQTFGGKFG
        TLNY +L + +Y  + VSSSEF++I++VKY L+ E PP  +MDD DV FLL   + +R  I V   ++ Q++  G  FG
Subjt:  TLNYSQLSATLYELSNVSSSEFNIIMRVKYKLDCECPPVCLMDDGDVRFLLSEMDHNRPPIFVNFEETNQEQTFGGKFG

TrEMBL top hitse value%identityAlignment
A0A6J1BRM2 protein FAR1-RELATED SEQUENCE 4-like3.0e-0569.23Show/hide
Query:  VEGDLLDSYAQLHAYGEALKIENPGTIFEIELEDSKYFK
        + GD   SY  L AYGEA+KI NPGTIFE+EL+DSKYFK
Subjt:  VEGDLLDSYAQLHAYGEALKIENPGTIFEIELEDSKYFK

A0A6J1CBY8 protein FAR1-RELATED SEQUENCE 4-like5.1e-0569.23Show/hide
Query:  VEGDLLDSYAQLHAYGEALKIENPGTIFEIELEDSKYFK
        + GD   SY  L AYGEALKI NPGTIFE+EL+D KYFK
Subjt:  VEGDLLDSYAQLHAYGEALKIENPGTIFEIELEDSKYFK

A0A6J1DDQ3 protein FAR1-RELATED SEQUENCE 4-like8.6e-0572.97Show/hide
Query:  GDLLDSYAQLHAYGEALKIENPGTIFEIELEDSKYFK
        GD   SY  L AYGEA KI NPGTIFE+EL+DSKYFK
Subjt:  GDLLDSYAQLHAYGEALKIENPGTIFEIELEDSKYFK

A0A6J1DG46 uncharacterized protein LOC1110207561.7e-0571.79Show/hide
Query:  VEGDLLDSYAQLHAYGEALKIENPGTIFEIELEDSKYFK
        + GDL  SY  L AYGEALKI NPGTIFE+ELE  KYFK
Subjt:  VEGDLLDSYAQLHAYGEALKIENPGTIFEIELEDSKYFK

A0A6J1DLL7 protein FAR1-RELATED SEQUENCE 4-like3.0e-0569.23Show/hide
Query:  VEGDLLDSYAQLHAYGEALKIENPGTIFEIELEDSKYFK
        + GD   SY  L AYGEA+KI NPGTIFE+EL+DSKYFK
Subjt:  VEGDLLDSYAQLHAYGEALKIENPGTIFEIELEDSKYFK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGCCAAGCACATTGAATTATAGTCAGCTAAGTGCTACATTATACGAACTTTCAAATGTCAGTTCTTCAGAGTTCAACATCATAATGAGGGTGAAATACAAGTTAGA
TTGTGAATGTCCTCCAGTTTGCCTCATGGATGATGGGGATGTTAGATTTCTACTCTCAGAAATGGATCATAACAGACCTCCAATATTTGTCAATTTTGAAGAGACTAATC
AAGAGCAAACATTTGGAGGGAAATTTGGAGAACATGAACCCATGTTGGCATCAGCAAACATTATTCAGGCCAGAAGCAAGGACCTACTGAAACCATTGGTGATTCTATTA
TTGAGAGTGCCTCATCATCACACTCAATATCTGACTACCCGTGATGTGATGGGTGGTCCTTTTATTGATGATGATACTATTGGGAGTGCCTCACCACAATCCAATACACA
TTTGACTGAATGTACTAAAATGGTGGGTGGTCCTTCTTTTGGTGGTAGTACCTCACCCCATCCCAATACATATCCAACTACATGCACTAGAATGGGTGGTCCTTCTATGT
TGAATAAAGAAGCAGGACCATCTGTGAGAACTACAAGAACAGGAGATATCATTATGCAATCGGTGCCAGCGTCAGGTGTGGATGTTGAGGGGGACCTCCTGGATTCATAC
GCTCAGTTGCATGCGTATGGAGAAGCCTTAAAGATCGAAAACCCTGGGACCATATTTGAGATTGAACTAGAAGATTCTAAATACTTCAAGGAATCCCCACCCTCGTCCCA
GCCTACAAATGGAGGGGACAGGGGCGAGGATGGGGTATCTCGATATTGCCTCTCCGCATCGGACATCATAAGCGCGAAGATGAGCACCACCTACATTGAGGTTTGGGCAT
ATGGAAAAGAGAGCTCAGAAAGCTCAAAAGGTGAAGAGTCGCTCGAGGAGGACCATGTAGAGCGTGAAGTGCCCTTTGAGGAGGCAACATCCTTACAATTTGAGCATGAG
GTGCCCTTCGAGGAGACGACCCATAGACATGCCGAGGAGAGGGGCAATGCTAAGGGAGGTACGCTTCCTCATGTTCTAGAGCCTATTGCCAGCACATGGAGAAATATGGT
CTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGCCAAGCACATTGAATTATAGTCAGCTAAGTGCTACATTATACGAACTTTCAAATGTCAGTTCTTCAGAGTTCAACATCATAATGAGGGTGAAATACAAGTTAGA
TTGTGAATGTCCTCCAGTTTGCCTCATGGATGATGGGGATGTTAGATTTCTACTCTCAGAAATGGATCATAACAGACCTCCAATATTTGTCAATTTTGAAGAGACTAATC
AAGAGCAAACATTTGGAGGGAAATTTGGAGAACATGAACCCATGTTGGCATCAGCAAACATTATTCAGGCCAGAAGCAAGGACCTACTGAAACCATTGGTGATTCTATTA
TTGAGAGTGCCTCATCATCACACTCAATATCTGACTACCCGTGATGTGATGGGTGGTCCTTTTATTGATGATGATACTATTGGGAGTGCCTCACCACAATCCAATACACA
TTTGACTGAATGTACTAAAATGGTGGGTGGTCCTTCTTTTGGTGGTAGTACCTCACCCCATCCCAATACATATCCAACTACATGCACTAGAATGGGTGGTCCTTCTATGT
TGAATAAAGAAGCAGGACCATCTGTGAGAACTACAAGAACAGGAGATATCATTATGCAATCGGTGCCAGCGTCAGGTGTGGATGTTGAGGGGGACCTCCTGGATTCATAC
GCTCAGTTGCATGCGTATGGAGAAGCCTTAAAGATCGAAAACCCTGGGACCATATTTGAGATTGAACTAGAAGATTCTAAATACTTCAAGGAATCCCCACCCTCGTCCCA
GCCTACAAATGGAGGGGACAGGGGCGAGGATGGGGTATCTCGATATTGCCTCTCCGCATCGGACATCATAAGCGCGAAGATGAGCACCACCTACATTGAGGTTTGGGCAT
ATGGAAAAGAGAGCTCAGAAAGCTCAAAAGGTGAAGAGTCGCTCGAGGAGGACCATGTAGAGCGTGAAGTGCCCTTTGAGGAGGCAACATCCTTACAATTTGAGCATGAG
GTGCCCTTCGAGGAGACGACCCATAGACATGCCGAGGAGAGGGGCAATGCTAAGGGAGGTACGCTTCCTCATGTTCTAGAGCCTATTGCCAGCACATGGAGAAATATGGT
CTGA
Protein sequenceShow/hide protein sequence
MVPSTLNYSQLSATLYELSNVSSSEFNIIMRVKYKLDCECPPVCLMDDGDVRFLLSEMDHNRPPIFVNFEETNQEQTFGGKFGEHEPMLASANIIQARSKDLLKPLVILL
LRVPHHHTQYLTTRDVMGGPFIDDDTIGSASPQSNTHLTECTKMVGGPSFGGSTSPHPNTYPTTCTRMGGPSMLNKEAGPSVRTTRTGDIIMQSVPASGVDVEGDLLDSY
AQLHAYGEALKIENPGTIFEIELEDSKYFKESPPSSQPTNGGDRGEDGVSRYCLSASDIISAKMSTTYIEVWAYGKESSESSKGEESLEEDHVEREVPFEEATSLQFEHE
VPFEETTHRHAEERGNAKGGTLPHVLEPIASTWRNMV