CuGenDBv2

Gene ID	Clc03G12280
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	Ubiquitin carboxyl-terminal hydrolase 15
Genome location	ClcChr03:19030737..19032697
RNA-Seq Expression	Clc03G12280
Synteny	Clc03G12280
Gene Ontology terms	GO:0016787 - hydrolase activity (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0038283.1 Ubiquitin carboxyl-terminal hydrolase 15 [Cucumis melo var. makuwa]

2.1e-51

94.34

Show/hide

Query:  MMSSYGVGFSLLFLLFLAALATGNELSFTQSNGSVAEMVPLIEEGKMKIMEMNETRRRLGSFQICAPCTCCGGAKGLCLPSPCCYAINCNIPNRPFGFCS
        MMSSYG GFS LFLLFL  LATGNELSFTQSNGSVAEMVPLIEEGKM +MEMNETRRRLGSFQICAPCTCCGGAKGLCLPSPCCYAINCNIPNRPFGFCS
Subjt:  MMSSYGVGFSLLFLLFLAALATGNELSFTQSNGSVAEMVPLIEEGKMKIMEMNETRRRLGSFQICAPCTCCGGAKGLCLPSPCCYAINCNIPNRPFGFCS

Query:  FTPKSY
        FTPKSY
Subjt:  FTPKSY

XP_004142564.1 uncharacterized protein LOC101221700 [Cucumis sativus]

2.3e-50

94.29

Show/hide

Query:  MMSSYGVGFSLLFLLFLAALATGNELSFTQSNGSVAEMVPLIEEGKMKIMEMNETRRRLGSFQICAPCTCCGGAKGLCLPSPCCYAINCNIPNRPFGFCS
        MMSSYG GFS LFLLFLA LATGN+LSFTQSNGSVAEMVPLIEEGKM +MEMNETRRRLGSFQICAPCTCCGGAKGLCLPSPCCYAINCNIPNRPFGFCS
Subjt:  MMSSYGVGFSLLFLLFLAALATGNELSFTQSNGSVAEMVPLIEEGKMKIMEMNETRRRLGSFQICAPCTCCGGAKGLCLPSPCCYAINCNIPNRPFGFCS

Query:  FTPKS
        FTPKS
Subjt:  FTPKS

XP_008443711.1 PREDICTED: uncharacterized protein LOC103487235 isoform X1 [Cucumis melo]

1.7e-50

94.29

Show/hide

Query:  MMSSYGVGFSLLFLLFLAALATGNELSFTQSNGSVAEMVPLIEEGKMKIMEMNETRRRLGSFQICAPCTCCGGAKGLCLPSPCCYAINCNIPNRPFGFCS
        MMSSYG GFS LFLLFL  LATGNELSFTQSNGSVAEMVPLIEEGKM +MEMNETRRRLGSFQICAPCTCCGGAKGLCLPSPCCYAINCNIPNRPFGFCS
Subjt:  MMSSYGVGFSLLFLLFLAALATGNELSFTQSNGSVAEMVPLIEEGKMKIMEMNETRRRLGSFQICAPCTCCGGAKGLCLPSPCCYAINCNIPNRPFGFCS

Query:  FTPKS
        FTPKS
Subjt:  FTPKS

XP_022988273.1 uncharacterized protein LOC111485573 [Cucurbita maxima]

6.2e-48

89.52

Show/hide

Query:  MMSSYGVGFSLLFLLFLAALATGNELSFTQSNGSVAEMVPLIEEGKMKIMEMNETRRRLGSFQICAPCTCCGGAKGLCLPSPCCYAINCNIPNRPFGFCS
        M+S YG GFSL+FLLFLA  ATGNELSFTQSNGSVA MVPLIEEGKM +MEMNETRR+LGSFQ+CAPCTCCGGAKGLCLPSPCCYAINCNIPNRPFGFCS
Subjt:  MMSSYGVGFSLLFLLFLAALATGNELSFTQSNGSVAEMVPLIEEGKMKIMEMNETRRRLGSFQICAPCTCCGGAKGLCLPSPCCYAINCNIPNRPFGFCS

Query:  FTPKS
        FTPKS
Subjt:  FTPKS

XP_038879730.1 uncharacterized protein LOC120071488 [Benincasa hispida]

3.0e-50

94.29

Show/hide

Query:  MMSSYGVGFSLLFLLFLAALATGNELSFTQSNGSVAEMVPLIEEGKMKIMEMNETRRRLGSFQICAPCTCCGGAKGLCLPSPCCYAINCNIPNRPFGFCS
        MMSSYG GF L+FLLFLA LATGNELSFTQSNGSVAEMVPLIEEGKMKI+EMNETRR+LGSFQICAPCTCCGGAKGLCLPSPCCYAINCNIPNRPFGFCS
Subjt:  MMSSYGVGFSLLFLLFLAALATGNELSFTQSNGSVAEMVPLIEEGKMKIMEMNETRRRLGSFQICAPCTCCGGAKGLCLPSPCCYAINCNIPNRPFGFCS

Query:  FTPKS
        FTPKS
Subjt:  FTPKS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LXU3 Uncharacterized protein

1.1e-50

94.29

Show/hide

Query:  MMSSYGVGFSLLFLLFLAALATGNELSFTQSNGSVAEMVPLIEEGKMKIMEMNETRRRLGSFQICAPCTCCGGAKGLCLPSPCCYAINCNIPNRPFGFCS
        MMSSYG GFS LFLLFLA LATGN+LSFTQSNGSVAEMVPLIEEGKM +MEMNETRRRLGSFQICAPCTCCGGAKGLCLPSPCCYAINCNIPNRPFGFCS
Subjt:  MMSSYGVGFSLLFLLFLAALATGNELSFTQSNGSVAEMVPLIEEGKMKIMEMNETRRRLGSFQICAPCTCCGGAKGLCLPSPCCYAINCNIPNRPFGFCS

Query:  FTPKS
        FTPKS
Subjt:  FTPKS

A0A1S3B9G4 uncharacterized protein LOC103487235 isoform X1

8.5e-51

94.29

Show/hide

Query:  MMSSYGVGFSLLFLLFLAALATGNELSFTQSNGSVAEMVPLIEEGKMKIMEMNETRRRLGSFQICAPCTCCGGAKGLCLPSPCCYAINCNIPNRPFGFCS
        MMSSYG GFS LFLLFL  LATGNELSFTQSNGSVAEMVPLIEEGKM +MEMNETRRRLGSFQICAPCTCCGGAKGLCLPSPCCYAINCNIPNRPFGFCS
Subjt:  MMSSYGVGFSLLFLLFLAALATGNELSFTQSNGSVAEMVPLIEEGKMKIMEMNETRRRLGSFQICAPCTCCGGAKGLCLPSPCCYAINCNIPNRPFGFCS

Query:  FTPKS
        FTPKS
Subjt:  FTPKS

A0A5A7T5S0 Ubiquitin carboxyl-terminal hydrolase 15

1.0e-51

94.34

Show/hide

Query:  MMSSYGVGFSLLFLLFLAALATGNELSFTQSNGSVAEMVPLIEEGKMKIMEMNETRRRLGSFQICAPCTCCGGAKGLCLPSPCCYAINCNIPNRPFGFCS
        MMSSYG GFS LFLLFL  LATGNELSFTQSNGSVAEMVPLIEEGKM +MEMNETRRRLGSFQICAPCTCCGGAKGLCLPSPCCYAINCNIPNRPFGFCS
Subjt:  MMSSYGVGFSLLFLLFLAALATGNELSFTQSNGSVAEMVPLIEEGKMKIMEMNETRRRLGSFQICAPCTCCGGAKGLCLPSPCCYAINCNIPNRPFGFCS

Query:  FTPKSY
        FTPKSY
Subjt:  FTPKSY

A0A6J1JLR6 uncharacterized protein LOC111485573

3.0e-48

89.52

Show/hide

Query:  MMSSYGVGFSLLFLLFLAALATGNELSFTQSNGSVAEMVPLIEEGKMKIMEMNETRRRLGSFQICAPCTCCGGAKGLCLPSPCCYAINCNIPNRPFGFCS
        M+S YG GFSL+FLLFLA  ATGNELSFTQSNGSVA MVPLIEEGKM +MEMNETRR+LGSFQ+CAPCTCCGGAKGLCLPSPCCYAINCNIPNRPFGFCS
Subjt:  MMSSYGVGFSLLFLLFLAALATGNELSFTQSNGSVAEMVPLIEEGKMKIMEMNETRRRLGSFQICAPCTCCGGAKGLCLPSPCCYAINCNIPNRPFGFCS

Query:  FTPKS
        FTPKS
Subjt:  FTPKS

E5GBK4 Uncharacterized protein

8.5e-51

94.29

Show/hide

Query:  MMSSYGVGFSLLFLLFLAALATGNELSFTQSNGSVAEMVPLIEEGKMKIMEMNETRRRLGSFQICAPCTCCGGAKGLCLPSPCCYAINCNIPNRPFGFCS
        MMSSYG GFS LFLLFL  LATGNELSFTQSNGSVAEMVPLIEEGKM +MEMNETRRRLGSFQICAPCTCCGGAKGLCLPSPCCYAINCNIPNRPFGFCS
Subjt:  MMSSYGVGFSLLFLLFLAALATGNELSFTQSNGSVAEMVPLIEEGKMKIMEMNETRRRLGSFQICAPCTCCGGAKGLCLPSPCCYAINCNIPNRPFGFCS

Query:  FTPKS
        FTPKS
Subjt:  FTPKS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G65295.1 unknown protein

1.6e-30

66.32

Show/hide

Query:  LLFLLFLAALATGNELSFTQSNGSVAEMVPLIEEGKMKIMEMNETRRRLGSFQICAPCTCCGGAKGLCLPSPCCYAINCNIPNRPFGFCSFTPKS
        LLF +F+++    NE+   + +  +  MVPL EE   K M MNETRR+LGSFQIC+ CTCCGGAKGLCLPSPCCYAINCNIPNRPFG+CSFTPK+
Subjt:  LLFLLFLAALATGNELSFTQSNGSVAEMVPLIEEGKMKIMEMNETRRRLGSFQICAPCTCCGGAKGLCLPSPCCYAINCNIPNRPFGFCSFTPKS

AT5G01015.1 unknown protein

3.2e-10

Show/hide

Query:  SLLFLLFLAALATGNELSFTQSNG---SVAEMVPLIEEGKMKIMEMNETRRRLGS-FQICAPCTCCGGAKGLCLPSPCCYAINCNIPNRPFGFCSFTPKS
        SL  ++FL  LAT    +  Q +G   +  EM P +E G    ME    RR+L +  ++C  C CC      C   PCC+ INC +PN+PFG C+F PKS
Subjt:  SLLFLLFLAALATGNELSFTQSNG---SVAEMVPLIEEGKMKIMEMNETRRRLGS-FQICAPCTCCGGAKGLCLPSPCCYAINCNIPNRPFGFCSFTPKS

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGATGTCTAGCTATGGCGTCGGATTCTCCCTCCTTTTTCTGCTTTTTCTCGCTGCTTTGGCTACTGGGAATGAACTAAGTTTCACTCAATCAAATGGGTCTGTA
GCAGAGATGGTGCCACTGATTGAGGAAGGGAAAATGAAGATTATGGAGATGAATGAGACTAGAAGGAGATTGGGGAGCTTCCAAATATGTGCTCCTTGCACTTGT
TGTGGTGGAGCCAAGGGCCTGTGTTTGCCTTCTCCTTGTTGCTATGCCATCAATTGCAACATCCCCAATAGGCCATTTGGTTTTTGCTCATTCACTCCCAAATCC
TACCTTAGTTCCAGGATTTATCCTAGAGTTATGAAAGTAGCCGTTCCTGATAGGATTGTGAGACCTGTGAACAAAAACGGTGCTACATAG

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MMSSYGVGFSLLFLLFLAALATGNELSFTQSNGSVAEMVPLIEEGKMKIMEMNETRRRLGSFQICAPCTCCGGAKGLCLPSPCCYAINCNIPNRPFGFCSFTPKS
YLSSRIYPRVMKVAVPDRIVRPVNKNGAT

Clc03G12280 (gene) of Watermelon (cordophanus) v2 genome