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Clc03G14680 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc03G14680
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionprotein FAR1-RELATED SEQUENCE 3-like
Genome locationClcChr03:26091626..26092166
RNA-Seq ExpressionClc03G14680
SyntenyClc03G14680
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008450197.1 PREDICTED: uncharacterized protein LOC103491857 [Cucumis melo]3.0e-0537.23Show/hide
Query:  LLLSLTDKSIVKVVELVLPNAYHCICM----------------------------------MCQLESSARGIHDELESIGYSRWPRAYSPRSRY
        +++S   KSI K +E+V P+  HCIC+                                  M  LESSA GI +ELESIG+++W RAYSPR RY
Subjt:  LLLSLTDKSIVKVVELVLPNAYHCICM----------------------------------MCQLESSARGIHDELESIGYSRWPRAYSPRSRY

XP_008464510.1 PREDICTED: protein FAR-RED ELONGATED HYPOCOTYL 3-like [Cucumis melo]1.0e-0535.71Show/hide
Query:  LLLSLTDKSIVKVVELVLPNAYHCICM----------------------------------MCQLESSARGIHDELESIGYSRWPRAYSPRSRYLTKGEQ
        +++S   KSI K +E+V PN  HCIC+                                  M  LESSA GI +ELESIG+++W RAYSPR RY    ++
Subjt:  LLLSLTDKSIVKVVELVLPNAYHCICM----------------------------------MCQLESSARGIHDELESIGYSRWPRAYSPRSRYLTKGEQ

Query:  CRRTFAFQKLQL
            F F KL++
Subjt:  CRRTFAFQKLQL

TrEMBL top hitse value%identityAlignment
A0A1S3BFU6 protein FAR1-RELATED SEQUENCE 3-like6.0e-0430.43Show/hide
Query:  LLLSLTDKSIVKVVELVLPNAYHCICM----------------------------------MCQLESSARGIHDELESIGYSRWPRAYSPRSRYLTKGEQ
        +++S   KSI K +++V PN  HC+C+                                  M  LESSA GI +ELESIG+++W RA+SP  RY      
Subjt:  LLLSLTDKSIVKVVELVLPNAYHCICM----------------------------------MCQLESSARGIHDELESIGYSRWPRAYSPRSRYLTKGEQ

Query:  CRRTFAFQKLQLQDM
          R+  F  L+ + +
Subjt:  CRRTFAFQKLQLQDM

A0A1S3BN44 uncharacterized protein LOC1034918571.4e-0537.23Show/hide
Query:  LLLSLTDKSIVKVVELVLPNAYHCICM----------------------------------MCQLESSARGIHDELESIGYSRWPRAYSPRSRY
        +++S   KSI K +E+V P+  HCIC+                                  M  LESSA GI +ELESIG+++W RAYSPR RY
Subjt:  LLLSLTDKSIVKVVELVLPNAYHCICM----------------------------------MCQLESSARGIHDELESIGYSRWPRAYSPRSRY

A0A1S3CLS8 protein FAR-RED ELONGATED HYPOCOTYL 3-like4.9e-0635.71Show/hide
Query:  LLLSLTDKSIVKVVELVLPNAYHCICM----------------------------------MCQLESSARGIHDELESIGYSRWPRAYSPRSRYLTKGEQ
        +++S   KSI K +E+V PN  HCIC+                                  M  LESSA GI +ELESIG+++W RAYSPR RY    ++
Subjt:  LLLSLTDKSIVKVVELVLPNAYHCICM----------------------------------MCQLESSARGIHDELESIGYSRWPRAYSPRSRYLTKGEQ

Query:  CRRTFAFQKLQL
            F F KL++
Subjt:  CRRTFAFQKLQL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGTTGTTATTGTCTCTAACAGATAAGAGCATAGTAAAAGTAGTTGAGCTTGTACTCCCTAATGCCTACCATTGTATATGTATGATGTGTCAATTGGAATCT
AGTGCACGTGGCATACACGACGAGTTAGAATCAATTGGCTATTCTAGATGGCCTCGTGCTTATTCACCTCGTAGTAGATATTTGACAAAGGGAGAACAATGCAGA
CGTACATTTGCCTTCCAAAAGTTGCAGTTGCAGGACATGGAATATTTTGCAGATCCCGTGCTCACATGCATGCGTAGTATTGAGTATGAAACACTTATCTATTAA
mRNA sequenceShow/hide mRNA sequence
ATGACGTTGTTATTGTCTCTAACAGATAAGAGCATAGTAAAAGTAGTTGAGCTTGTACTCCCTAATGCCTACCATTGTATATGTATGATGTGTCAATTGGAATCT
AGTGCACGTGGCATACACGACGAGTTAGAATCAATTGGCTATTCTAGATGGCCTCGTGCTTATTCACCTCGTAGTAGATATTTGACAAAGGGAGAACAATGCAGA
CGTACATTTGCCTTCCAAAAGTTGCAGTTGCAGGACATGGAATATTTTGCAGATCCCGTGCTCACATGCATGCGTAGTATTGAGTATGAAACACTTATCTATTAA
Protein sequenceShow/hide protein sequence
MTLLLSLTDKSIVKVVELVLPNAYHCICMMCQLESSARGIHDELESIGYSRWPRAYSPRSRYLTKGEQCRRTFAFQKLQLQDMEYFADPVLTCMRSIEYETLIY