; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Clc03G15530 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc03G15530
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Descriptionlamin-like protein
Genome locationClcChr03:27766693..27767953
RNA-Seq ExpressionClc03G15530
SyntenyClc03G15530
Gene Ontology termsGO:0022900 - electron transport chain (biological process)
GO:0050896 - response to stimulus (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0009055 - electron transfer activity (molecular function)
InterPro domainsIPR003245 - Phytocyanin domain
IPR008972 - Cupredoxin
IPR039391 - Phytocyanin


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7023887.1 Lamin-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]5.5e-5770.41Show/hide
Query:  MLGMAAEA--VTTMAV-VAVAGWLLFGVEGRQPVLHRVGGGKYTWTPNINFTDWSIHEHFYVD----FGFDKHIYNVLEVNKTSYEGCNDKDFIFNITRG
        M GM AEA  VTT+AV V +AGWLL GVEGR+PVLHRVGGGKYTWT N+NFTDWSIHEHFYV     FGFDK IYNVL+VNKTSY+ CN+ DF+FN+TRG
Subjt:  MLGMAAEA--VTTMAV-VAVAGWLLFGVEGRQPVLHRVGGGKYTWTPNINFTDWSIHEHFYVD----FGFDKHIYNVLEVNKTSYEGCNDKDFIFNITRG

Query:  GRDVFNLTEAKTYYFLSGRGFCFQGMKVAVFVEEYSPPISPPNLPNTSPSLHSLIWPFSLLLSINISMA
        GRDVFNLT+AK YYFLSGRGFCFQGMKVA+FVE+ SPPIS P + N S S+  L    SL + I ++ A
Subjt:  GRDVFNLTEAKTYYFLSGRGFCFQGMKVAVFVEEYSPPISPPNLPNTSPSLHSLIWPFSLLLSINISMA

XP_008451094.1 PREDICTED: lamin-like protein [Cucumis melo]7.1e-6579.29Show/hide
Query:  MLGMAAEAVTTMAVVAVAGWLLFGVEGRQPVLHRVGGGKYTWTPNINFTDWSIHEHFYVD----FGFDKHIYNVLEVNKTSYEGCNDKDFIFNITRGGRD
        M GMAA+ V T  VV V GWLL GVEG+QPVLH VGGGKYTWT NINFTDWSIHEHFYV     FGFDKHIYNVLEVNKTSYE CNDKDFIFNIT+GGRD
Subjt:  MLGMAAEAVTTMAVVAVAGWLLFGVEGRQPVLHRVGGGKYTWTPNINFTDWSIHEHFYVD----FGFDKHIYNVLEVNKTSYEGCNDKDFIFNITRGGRD

Query:  VFNLTEAKTYYFLSGRGFCFQGMKVAVFVEEYSPP----ISPPNL----PNTSPSLHSLIWPFSLLLSI
        VFNLTEAKTYYFLSGRGFCFQGMKVAVFVEEYS P    ISPPNL    PN SPSL  L+ PFS LL I
Subjt:  VFNLTEAKTYYFLSGRGFCFQGMKVAVFVEEYSPP----ISPPNL----PNTSPSLHSLIWPFSLLLSI

XP_022988228.1 lamin-like protein [Cucurbita maxima]9.4e-5770.66Show/hide
Query:  MLGMAAEAVTTMAVVAV---AGWLLFGVEGRQPVLHRVGGGKYTWTPNINFTDWSIHEHFYVD----FGFDKHIYNVLEVNKTSYEGCNDKDFIFNITRG
        M GM AE  T   VV V   AGWLL GV+GRQPVLHRVGGGKYTWT NINFTDWSIHEHFYV     FGFDK IYNVL+VNKTSY+ CN+ DF+FN+TRG
Subjt:  MLGMAAEAVTTMAVVAV---AGWLLFGVEGRQPVLHRVGGGKYTWTPNINFTDWSIHEHFYVD----FGFDKHIYNVLEVNKTSYEGCNDKDFIFNITRG

Query:  GRDVFNLTEAKTYYFLSGRGFCFQGMKVAVFVEEYSPPISPPNLPNTSPSLHSLIWPFSLLLSINIS
        GRDVFNLT+AK YYFLSGRGFCFQGMKVA+FVE+ SPPIS P + N S S+  L    SL L I I+
Subjt:  GRDVFNLTEAKTYYFLSGRGFCFQGMKVAVFVEEYSPPISPPNLPNTSPSLHSLIWPFSLLLSINIS

XP_031736018.1 lamin-like protein [Cucumis sativus]2.5e-6578.11Show/hide
Query:  MLGMAAEAVTTMAVVAVAGWLLFGVEGRQPVLHRVGGGKYTWTPNINFTDWSIHEHFYVD----FGFDKHIYNVLEVNKTSYEGCNDKDFIFNITRGGRD
        M GMAAEA+  M VV V GWLL GVEG+QPVLH VGGGKYTWT NINFTDWSIH+HFYV     FGFDKHIYNVLEVNKTSYE CN+KDFIFNIT+GGRD
Subjt:  MLGMAAEAVTTMAVVAVAGWLLFGVEGRQPVLHRVGGGKYTWTPNINFTDWSIHEHFYVD----FGFDKHIYNVLEVNKTSYEGCNDKDFIFNITRGGRD

Query:  VFNLTEAKTYYFLSGRGFCFQGMKVAVFVEEYSPP----ISPPNLP----NTSPSLHSLIWPFSLLLSI
        VFNLTEAKTYYFLSGRGFCFQGMKVAVFVEEYSPP    IS PNLP    N SPSL  L+ PFS  L I
Subjt:  VFNLTEAKTYYFLSGRGFCFQGMKVAVFVEEYSPP----ISPPNLP----NTSPSLHSLIWPFSLLLSI

XP_038880463.1 lamin-like protein [Benincasa hispida]1.2e-6782.91Show/hide
Query:  MLGMAAEAVTTMAVVAVAGWLLFGVEGRQPVLHRVGGGKYTWTPNINFTDWSIHEHFYVD----FGFDKHIYNVLEVNKTSYEGCNDKDFIFNITRGGRD
        M GMA EAVTT+  +AVAGWLLFG EGRQPVLHRVGGGKYTWT NINFTDWSIHEHFYV     FGFDKHIYNVLEVNKTSYE CNDK FIFN+TRGGRD
Subjt:  MLGMAAEAVTTMAVVAVAGWLLFGVEGRQPVLHRVGGGKYTWTPNINFTDWSIHEHFYVD----FGFDKHIYNVLEVNKTSYEGCNDKDFIFNITRGGRD

Query:  VFNLTEAKTYYFLSGRGFCFQGMKVAVFVEEYSPPISPPNLPNT---SPSLHSLIWPF
        VFNLTEAKTYYFLSGRGFCFQGMKVAVFVEE  P +SPPNLPN    SPSL  LI+PF
Subjt:  VFNLTEAKTYYFLSGRGFCFQGMKVAVFVEEYSPPISPPNLPNT---SPSLHSLIWPF

TrEMBL top hitse value%identityAlignment
A0A1S3BQT0 lamin-like protein3.5e-6579.29Show/hide
Query:  MLGMAAEAVTTMAVVAVAGWLLFGVEGRQPVLHRVGGGKYTWTPNINFTDWSIHEHFYVD----FGFDKHIYNVLEVNKTSYEGCNDKDFIFNITRGGRD
        M GMAA+ V T  VV V GWLL GVEG+QPVLH VGGGKYTWT NINFTDWSIHEHFYV     FGFDKHIYNVLEVNKTSYE CNDKDFIFNIT+GGRD
Subjt:  MLGMAAEAVTTMAVVAVAGWLLFGVEGRQPVLHRVGGGKYTWTPNINFTDWSIHEHFYVD----FGFDKHIYNVLEVNKTSYEGCNDKDFIFNITRGGRD

Query:  VFNLTEAKTYYFLSGRGFCFQGMKVAVFVEEYSPP----ISPPNL----PNTSPSLHSLIWPFSLLLSI
        VFNLTEAKTYYFLSGRGFCFQGMKVAVFVEEYS P    ISPPNL    PN SPSL  L+ PFS LL I
Subjt:  VFNLTEAKTYYFLSGRGFCFQGMKVAVFVEEYSPP----ISPPNL----PNTSPSLHSLIWPFSLLLSI

A0A371EID2 Lamin-like protein (Fragment)4.0e-4569.67Show/hide
Query:  FGVEGRQPVLHRVGGGKYTWTPNINFTDWSIHEHFYVDFGFDKHIYNVLEVNKTSYEGCNDKDFIFNITRGGRDVFNLTEAKTYYFLSGRGFCFQGMKVA
        + +EGR P+LHRVGGG+YTW P +NFT W+ HEHFY DFGFDK IYNVLEVNKT+YE CND  FI NITRGGRDVF L EA+ YYFL G+GFCFQGMK+A
Subjt:  FGVEGRQPVLHRVGGGKYTWTPNINFTDWSIHEHFYVDFGFDKHIYNVLEVNKTSYEGCNDKDFIFNITRGGRDVFNLTEAKTYYFLSGRGFCFQGMKVA

Query:  VFVEEYSPPISPPNLPN-TSPS
        + VEE +P + PP L N T PS
Subjt:  VFVEEYSPPISPPNLPN-TSPS

A0A6J1DWA4 lamin-like protein7.7e-5771.18Show/hide
Query:  AEAVTTMAVVAVAGWLLFGVEGRQPVLHRVGGGKYTWTPNINFTDWSIHEHFYVD----FGFDKHIYNVLEVNKTSYEGCNDKDFIFNITRGGRDVFNLT
        AEAV  +A+    GWLL GVEGR P+LHRVGGGKYTW PN+NFTDWSIHEHFYV     FGFDKHIYNVLEVN+TSYE CN+KDFIFNITRGGRDVFNLT
Subjt:  AEAVTTMAVVAVAGWLLFGVEGRQPVLHRVGGGKYTWTPNINFTDWSIHEHFYVD----FGFDKHIYNVLEVNKTSYEGCNDKDFIFNITRGGRDVFNLT

Query:  EAKTYYFLSGRGFCFQGMKVAVFVEEYSPP--ISPPNLP---NTSPSLHSLIWPFSLLLSINISMANSFF
        +AK YYFLSGRGFC+QGMK+AVFVEE SPP   SPPNLP   N SPS+   ++   LLL   I+   SFF
Subjt:  EAKTYYFLSGRGFCFQGMKVAVFVEEYSPP--ISPPNLP---NTSPSLHSLIWPFSLLLSINISMANSFF

A0A6J1HAJ6 lamin-like protein1.3e-5671.01Show/hide
Query:  MLGMAAEA--VTTMA-VVAVAGWLLFGVEGRQPVLHRVGGGKYTWTPNINFTDWSIHEHFYVD----FGFDKHIYNVLEVNKTSYEGCNDKDFIFNITRG
        M GM  EA  VTT+A VV +AGWLL GVEGR+PVLHRVGGGKYTWT N+NFTDWSIHEHFYV     FGFDK IYNVL+VNKTSY+ CN+ DF+FN+TRG
Subjt:  MLGMAAEA--VTTMA-VVAVAGWLLFGVEGRQPVLHRVGGGKYTWTPNINFTDWSIHEHFYVD----FGFDKHIYNVLEVNKTSYEGCNDKDFIFNITRG

Query:  GRDVFNLTEAKTYYFLSGRGFCFQGMKVAVFVEEYSPPISPPNLPNTSPSLHSLIWPFSLLLSINISMA
        GRDVFNLT+AK YYFLSGRGFCFQGMKVA+FVE+ SPPIS P + N S S+  L  P S  LS+ I++A
Subjt:  GRDVFNLTEAKTYYFLSGRGFCFQGMKVAVFVEEYSPPISPPNLPNTSPSLHSLIWPFSLLLSINISMA

A0A6J1JLN0 lamin-like protein4.5e-5770.66Show/hide
Query:  MLGMAAEAVTTMAVVAV---AGWLLFGVEGRQPVLHRVGGGKYTWTPNINFTDWSIHEHFYVD----FGFDKHIYNVLEVNKTSYEGCNDKDFIFNITRG
        M GM AE  T   VV V   AGWLL GV+GRQPVLHRVGGGKYTWT NINFTDWSIHEHFYV     FGFDK IYNVL+VNKTSY+ CN+ DF+FN+TRG
Subjt:  MLGMAAEAVTTMAVVAV---AGWLLFGVEGRQPVLHRVGGGKYTWTPNINFTDWSIHEHFYVD----FGFDKHIYNVLEVNKTSYEGCNDKDFIFNITRG

Query:  GRDVFNLTEAKTYYFLSGRGFCFQGMKVAVFVEEYSPPISPPNLPNTSPSLHSLIWPFSLLLSINIS
        GRDVFNLT+AK YYFLSGRGFCFQGMKVA+FVE+ SPPIS P + N S S+  L    SL L I I+
Subjt:  GRDVFNLTEAKTYYFLSGRGFCFQGMKVAVFVEEYSPPISPPNLPNTSPSLHSLIWPFSLLLSINIS

SwissProt top hitse value%identityAlignment
Q39131 Lamin-like protein5.6e-2049.04Show/hide
Query:  HRVGGGKYTWTPNINFTDWSIHEHFYVD----FGFDKHIYNVLEVNKTSYEGCNDKDFIFNITRG-GRDVFNLTEAKTYYFLSGRGFCFQGMKVAVFVEE
        + VG  K+ W PNIN+T W+  +HFY+     F FD++ +N+LEVNKT YEGC     I N TRG GRD+  L + K YY L G+G C+ GMK++V VE+
Subjt:  HRVGGGKYTWTPNINFTDWSIHEHFYVD----FGFDKHIYNVLEVNKTSYEGCNDKDFIFNITRG-GRDVFNLTEAKTYYFLSGRGFCFQGMKVAVFVEE

Query:  YSPP
          PP
Subjt:  YSPP

Q9T076 Early nodulin-like protein 22.3e-0530.51Show/hide
Query:  GGGKYTWTPNINFTDWS------IHEHFYVDFGFDKHIYNVLEVNKTSYEGCNDKDFIFNITRGGRDVFNLTEAKTYYFLSG-RGFCFQGMKVAVFVEEY
        G G +   P  N+  WS      +H+  Y  F + K   +VLEVNK  Y+ CN K+ I  +  G  ++ +L     +YF+SG    C +G K+ V V   
Subjt:  GGGKYTWTPNINFTDWS------IHEHFYVDFGFDKHIYNVLEVNKTSYEGCNDKDFIFNITRGGRDVFNLTEAKTYYFLSG-RGFCFQGMKVAVFVEEY

Query:  SPPISPPNLPNTSPSLHS
                +P+T+ S H+
Subjt:  SPPISPPNLPNTSPSLHS

Arabidopsis top hitse value%identityAlignment
AT2G27035.1 early nodulin-like protein 204.8e-3550.74Show/hide
Query:  AVVAVAGWLLFGVEGRQPVLHRVGGGKYTWTPNINFTDWSIHEHFY----VDFGFDKHIYNVLEVNKTSYEGCNDKDFIFNITRGGRDVFNLTEAKTYYF
        A+V V   +L  V   +  LHRVGGG+YTW  ++NF+DW+ H+ FY    + FGF++  +N+L+VNK+SYE C D D+IFNITRGGRDVF L E K YYF
Subjt:  AVVAVAGWLLFGVEGRQPVLHRVGGGKYTWTPNINFTDWSIHEHFY----VDFGFDKHIYNVLEVNKTSYEGCNDKDFIFNITRGGRDVFNLTEAKTYYF

Query:  LSGRGFCFQGMKVAVFVEEYSPPISPPNLPNTSPSL
        + GRG+C +GMK+A+ V    PP +P N  +T+  L
Subjt:  LSGRGFCFQGMKVAVFVEEYSPPISPPNLPNTSPSL

AT3G01070.1 early nodulin-like protein 162.8e-1945.95Show/hide
Query:  VGGGKYTWTPNINFTDWSIHEHFYVD----FGFDKHIYNVLEVNKTSYEGCNDKDFIFNITRG-GRDVFNLTEAKTYYFLSGR-GFCFQGMKVAVFVEEY
        VG  K+ W PNIN+T W+  +HFY+D    F ++++ YNV+EVN+T+Y  CN  + I N +RG GRD+ +L   + YY +SG  G C+ GMK+AV VE+ 
Subjt:  VGGGKYTWTPNINFTDWSIHEHFYVD----FGFDKHIYNVLEVNKTSYEGCNDKDFIFNITRG-GRDVFNLTEAKTYYFLSGR-GFCFQGMKVAVFVEEY

Query:  SPPISPPNLPN
         PP  P   PN
Subjt:  SPPISPPNLPN

AT4G12880.1 early nodulin-like protein 191.3e-1949.53Show/hide
Query:  GGKYTWTPNINFTDWSIHEHFYVD----FGFDKHIYNVLEVNKTSYEGCNDKDFIFNITRG-GRDVFNLTEAKTYYFLSGRGFCFQGMKVAVFVEEYSPP
        G K  W PNIN+T W+  +HFYV     F F +  +N+LEVNK  YE C     I N TRG GRD+  L E + YY L GRG C QGMK+ V VE  +PP
Subjt:  GGKYTWTPNINFTDWSIHEHFYVD----FGFDKHIYNVLEVNKTSYEGCNDKDFIFNITRG-GRDVFNLTEAKTYYFLSGRGFCFQGMKVAVFVEEYSPP

Query:  ISPPNLP
          PP  P
Subjt:  ISPPNLP

AT4G12880.2 early nodulin-like protein 194.0e-1348.81Show/hide
Query:  HFYVDFGFDKHIYNVLEVNKTSYEGCNDKDFIFNITRG-GRDVFNLTEAKTYYFLSGRGFCFQGMKVAVFVEEYSPPISPPNLP
        +F ++F F +  +N+LEVNK  YE C     I N TRG GRD+  L E + YY L GRG C QGMK+ V VE  +PP  PP  P
Subjt:  HFYVDFGFDKHIYNVLEVNKTSYEGCNDKDFIFNITRG-GRDVFNLTEAKTYYFLSGRGFCFQGMKVAVFVEEYSPPISPPNLP

AT5G15350.1 early nodulin-like protein 174.0e-2149.04Show/hide
Query:  HRVGGGKYTWTPNINFTDWSIHEHFYVD----FGFDKHIYNVLEVNKTSYEGCNDKDFIFNITRG-GRDVFNLTEAKTYYFLSGRGFCFQGMKVAVFVEE
        + VG  K+ W PNIN+T W+  +HFY+     F FD++ +N+LEVNKT YEGC     I N TRG GRD+  L + K YY L G+G C+ GMK++V VE+
Subjt:  HRVGGGKYTWTPNINFTDWSIHEHFYVD----FGFDKHIYNVLEVNKTSYEGCNDKDFIFNITRG-GRDVFNLTEAKTYYFLSGRGFCFQGMKVAVFVEE

Query:  YSPP
          PP
Subjt:  YSPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAATTCTGAAAATGCTCGGGATGGCGGCGGAGGCAGTGACAACCATGGCGGTCGTGGCGGTGGCCGGGTGGTTGCTATTTGGAGTTGAGGGTAGACAGCCAGTGTT
GCATAGGGTTGGAGGAGGAAAATATACTTGGACACCTAATATTAACTTCACTGATTGGTCAATTCATGAACACTTTTATGTTGATTTTGGGTTTGATAAACATATCTACA
ACGTGTTGGAAGTGAACAAAACGAGCTACGAGGGTTGCAACGACAAGGATTTCATTTTCAACATAACAAGGGGAGGGAGAGATGTGTTCAATCTAACAGAAGCAAAAACA
TATTACTTTCTAAGTGGAAGAGGATTTTGCTTTCAAGGAATGAAAGTTGCTGTTTTTGTTGAAGAGTACTCTCCTCCCATTTCACCACCAAATTTACCCAATACTTCTCC
ATCTTTACATTCATTAATATGGCCTTTCTCCCTCTTGCTATCCATCAACATTTCCATGGCTAATTCCTTCTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGCAAATTCTGAAAATGCTCGGGATGGCGGCGGAGGCAGTGACAACCATGGCGGTCGTGGCGGTGGCCGGGTGGTTGCTATTTGGAGTTGAGGGTAGACAGCCAGTGTT
GCATAGGGTTGGAGGAGGAAAATATACTTGGACACCTAATATTAACTTCACTGATTGGTCAATTCATGAACACTTTTATGTTGATTTTGGGTTTGATAAACATATCTACA
ACGTGTTGGAAGTGAACAAAACGAGCTACGAGGGTTGCAACGACAAGGATTTCATTTTCAACATAACAAGGGGAGGGAGAGATGTGTTCAATCTAACAGAAGCAAAAACA
TATTACTTTCTAAGTGGAAGAGGATTTTGCTTTCAAGGAATGAAAGTTGCTGTTTTTGTTGAAGAGTACTCTCCTCCCATTTCACCACCAAATTTACCCAATACTTCTCC
ATCTTTACATTCATTAATATGGCCTTTCTCCCTCTTGCTATCCATCAACATTTCCATGGCTAATTCCTTCTTCTAA
Protein sequenceShow/hide protein sequence
MQILKMLGMAAEAVTTMAVVAVAGWLLFGVEGRQPVLHRVGGGKYTWTPNINFTDWSIHEHFYVDFGFDKHIYNVLEVNKTSYEGCNDKDFIFNITRGGRDVFNLTEAKT
YYFLSGRGFCFQGMKVAVFVEEYSPPISPPNLPNTSPSLHSLIWPFSLLLSINISMANSFF