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Clc03G17810 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc03G17810
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionLow-molecular-weight cysteine-rich
Genome locationClcChr03:30164509..30165700
RNA-Seq ExpressionClc03G17810
SyntenyClc03G17810
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_016900965.1 PREDICTED: putative defensin-like protein 184 [Cucumis melo]1.1e-3181.18Show/hide
Query:  MVSKLPRVELQTKIWLSKMATLFFLCLLMS-FFFYAQAKNCHRVWTCKGDIRCWEDCKNQHNGKGLCDLYTAPSVPKQCFCAYNC
        M SKL RVELQ K  L     L F+CLLMS FFFYAQA+NCHRVW+CKGDIRCWEDCKNQHNGKGLCDLYTAPSVPKQCFCAY C
Subjt:  MVSKLPRVELQTKIWLSKMATLFFLCLLMS-FFFYAQAKNCHRVWTCKGDIRCWEDCKNQHNGKGLCDLYTAPSVPKQCFCAYNC
XP_022932583.1 putative defensin-like protein 184 isoform X2 [Cucurbita moschata]2.1e-3076.74Show/hide
Query:  MVSKL-PRVELQTKIWLSKMAT-LFFLCLLMSFFFYAQAKNCHRVWTCKGDIRCWEDCKNQHNGKGLCDLYTAPSVPKQCFCAYNC
        M SK+  R+ LQTK  LSKMAT L FLC L + F YA+A+NCHRVW CKGDIRCWEDCKN+HNGKGLCDLYTAPSVPKQCFCAY C
Subjt:  MVSKL-PRVELQTKIWLSKMAT-LFFLCLLMSFFFYAQAKNCHRVWTCKGDIRCWEDCKNQHNGKGLCDLYTAPSVPKQCFCAYNC
XP_022965959.1 putative defensin-like protein 184 isoform X1 [Cucurbita maxima]2.1e-3078.16Show/hide
Query:  MVSKL-PRVELQTKIWLSKMAT-LFFLCLLMSFFFY-AQAKNCHRVWTCKGDIRCWEDCKNQHNGKGLCDLYTAPSVPKQCFCAYNC
        M SK+  RV+LQTK  LSKMAT L FLC L S+F Y AQA+NCHRVW CKGDIRCWE+CKN+HNGKGLCDLYTAPSVPKQCFCAY C
Subjt:  MVSKL-PRVELQTKIWLSKMAT-LFFLCLLMSFFFY-AQAKNCHRVWTCKGDIRCWEDCKNQHNGKGLCDLYTAPSVPKQCFCAYNC
XP_022965971.1 putative defensin-like protein 184 isoform X2 [Cucurbita maxima]8.7e-3279.07Show/hide
Query:  MVSKL-PRVELQTKIWLSKMAT-LFFLCLLMSFFFYAQAKNCHRVWTCKGDIRCWEDCKNQHNGKGLCDLYTAPSVPKQCFCAYNC
        M SK+  RV+LQTK  LSKMAT L FLC L S+F YAQA+NCHRVW CKGDIRCWE+CKN+HNGKGLCDLYTAPSVPKQCFCAY C
Subjt:  MVSKL-PRVELQTKIWLSKMAT-LFFLCLLMSFFFYAQAKNCHRVWTCKGDIRCWEDCKNQHNGKGLCDLYTAPSVPKQCFCAYNC
XP_031740117.1 putative defensin-like protein 184 [Cucumis sativus]9.3e-3483.72Show/hide
Query:  MVSKLPRVELQTKIWLSKMA-TLFFLCLLMS-FFFYAQAKNCHRVWTCKGDIRCWEDCKNQHNGKGLCDLYTAPSVPKQCFCAYNC
        M SKL RVELQ K W SKMA  L F+ LLMS FFFYAQA+NCHRVW+CKGDIRCWEDCKNQHNGKGLCDLYTAPSVPKQCFCAY C
Subjt:  MVSKLPRVELQTKIWLSKMA-TLFFLCLLMS-FFFYAQAKNCHRVWTCKGDIRCWEDCKNQHNGKGLCDLYTAPSVPKQCFCAYNC
TrEMBL top hitse value%identityAlignment
A0A1S4DZ19 putative defensin-like protein 1845.5e-3281.18Show/hide
Query:  MVSKLPRVELQTKIWLSKMATLFFLCLLMS-FFFYAQAKNCHRVWTCKGDIRCWEDCKNQHNGKGLCDLYTAPSVPKQCFCAYNC
        M SKL RVELQ K  L     L F+CLLMS FFFYAQA+NCHRVW+CKGDIRCWEDCKNQHNGKGLCDLYTAPSVPKQCFCAY C
Subjt:  MVSKLPRVELQTKIWLSKMATLFFLCLLMS-FFFYAQAKNCHRVWTCKGDIRCWEDCKNQHNGKGLCDLYTAPSVPKQCFCAYNC
A0A6J1F252 putative defensin-like protein 184 isoform X21.0e-3076.74Show/hide
Query:  MVSKL-PRVELQTKIWLSKMAT-LFFLCLLMSFFFYAQAKNCHRVWTCKGDIRCWEDCKNQHNGKGLCDLYTAPSVPKQCFCAYNC
        M SK+  R+ LQTK  LSKMAT L FLC L + F YA+A+NCHRVW CKGDIRCWEDCKN+HNGKGLCDLYTAPSVPKQCFCAY C
Subjt:  MVSKL-PRVELQTKIWLSKMAT-LFFLCLLMSFFFYAQAKNCHRVWTCKGDIRCWEDCKNQHNGKGLCDLYTAPSVPKQCFCAYNC
A0A6J1F2J5 putative defensin-like protein 184 isoform X12.6e-2975.86Show/hide
Query:  MVSKL-PRVELQTKIWLSKMAT-LFFLCLLMSFFFY-AQAKNCHRVWTCKGDIRCWEDCKNQHNGKGLCDLYTAPSVPKQCFCAYNC
        M SK+  R+ LQTK  LSKMAT L FLC L + F Y A+A+NCHRVW CKGDIRCWEDCKN+HNGKGLCDLYTAPSVPKQCFCAY C
Subjt:  MVSKL-PRVELQTKIWLSKMAT-LFFLCLLMSFFFY-AQAKNCHRVWTCKGDIRCWEDCKNQHNGKGLCDLYTAPSVPKQCFCAYNC
A0A6J1HN36 putative defensin-like protein 184 isoform X24.2e-3279.07Show/hide
Query:  MVSKL-PRVELQTKIWLSKMAT-LFFLCLLMSFFFYAQAKNCHRVWTCKGDIRCWEDCKNQHNGKGLCDLYTAPSVPKQCFCAYNC
        M SK+  RV+LQTK  LSKMAT L FLC L S+F YAQA+NCHRVW CKGDIRCWE+CKN+HNGKGLCDLYTAPSVPKQCFCAY C
Subjt:  MVSKL-PRVELQTKIWLSKMAT-LFFLCLLMSFFFYAQAKNCHRVWTCKGDIRCWEDCKNQHNGKGLCDLYTAPSVPKQCFCAYNC
A0A6J1HSC8 putative defensin-like protein 184 isoform X11.0e-3078.16Show/hide
Query:  MVSKL-PRVELQTKIWLSKMAT-LFFLCLLMSFFFY-AQAKNCHRVWTCKGDIRCWEDCKNQHNGKGLCDLYTAPSVPKQCFCAYNC
        M SK+  RV+LQTK  LSKMAT L FLC L S+F Y AQA+NCHRVW CKGDIRCWE+CKN+HNGKGLCDLYTAPSVPKQCFCAY C
Subjt:  MVSKL-PRVELQTKIWLSKMAT-LFFLCLLMSFFFY-AQAKNCHRVWTCKGDIRCWEDCKNQHNGKGLCDLYTAPSVPKQCFCAYNC
SwissProt top hitse value%identityAlignment
P82732 Putative defensin-like protein 1845.0e-1444Show/hide
Query:  KMATLFFLCLLMSFF--------FYAQAKNCHRVWTCKGDIRCWEDCKNQHNGKGLCDLYTAPSVPKQCFCAYNC
        K +++ F+ +++ F            +AK C + WTC+G+ +C E C   HNG G+CDLYTAP VPKQCFC Y+C
Subjt:  KMATLFFLCLLMSFF--------FYAQAKNCHRVWTCKGDIRCWEDCKNQHNGKGLCDLYTAPSVPKQCFCAYNC
P82754 Putative defensin-like protein 1858.5e-0638.03Show/hide
Query:  LCLLMSFFFYA---QAKNCHRVWTCKG---DIRCWEDCKNQHNGKGLCDLYTAPSVPK-----QCFCAYNC
        L LL+ FF  +   +AK C   WTC G   + +C E+C  +H G G C+LYT P  P       C C ++C
Subjt:  LCLLMSFFFYA---QAKNCHRVWTCKG---DIRCWEDCKNQHNGKGLCDLYTAPSVPK-----QCFCAYNC
Arabidopsis top hitse value%identityAlignment
AT3G04945.1 low-molecular-weight cysteine-rich 183.5e-1544Show/hide
Query:  KMATLFFLCLLMSFF--------FYAQAKNCHRVWTCKGDIRCWEDCKNQHNGKGLCDLYTAPSVPKQCFCAYNC
        K +++ F+ +++ F            +AK C + WTC+G+ +C E C   HNG G+CDLYTAP VPKQCFC Y+C
Subjt:  KMATLFFLCLLMSFF--------FYAQAKNCHRVWTCKGDIRCWEDCKNQHNGKGLCDLYTAPSVPKQCFCAYNC
AT3G23167.1 low-molecular-weight cysteine-rich 396.1e-0738.03Show/hide
Query:  LCLLMSFFFYA---QAKNCHRVWTCKG---DIRCWEDCKNQHNGKGLCDLYTAPSVPK-----QCFCAYNC
        L LL+ FF  +   +AK C   WTC G   + +C E+C  +H G G C+LYT P  P       C C ++C
Subjt:  LCLLMSFFFYA---QAKNCHRVWTCKG---DIRCWEDCKNQHNGKGLCDLYTAPSVPK-----QCFCAYNC

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCTCCAAACTGCCTAGAGTTGAGCTCCAAACAAAGATATGGCTATCAAAAATGGCAACACTTTTCTTCCTTTGCTTGCTAATGAGCTTCTTCTTTTATGCACAAGC
AAAGAATTGCCATAGAGTGTGGACTTGCAAAGGAGACATTAGGTGTTGGGAAGATTGCAAGAATCAACATAATGGAAAGGGACTATGTGACTTGTACACTGCCCCTTCTG
TCCCTAAACAATGCTTTTGTGCTTATAATTGTTGA
mRNA sequenceShow/hide mRNA sequence
AATAAAAGATAGAAAAGAAAATTTTCAACTTAGATTGTTTGTTGTCTTGGTACACAAAGGTTCCAAAATGGTCTCCAAACTGCCTAGAGTTGAGCTCCAAACAAAGATAT
GGCTATCAAAAATGGCAACACTTTTCTTCCTTTGCTTGCTAATGAGCTTCTTCTTTTATGCACAAGCAAAGAATTGCCATAGAGTGTGGACTTGCAAAGGAGACATTAGG
TGTTGGGAAGATTGCAAGAATCAACATAATGGAAAGGGACTATGTGACTTGTACACTGCCCCTTCTGTCCCTAAACAATGCTTTTGTGCTTATAATTGTTGAGACATTTC
TATTACTATTTGCTATTTTATGTTTACTTTCTCAATGACTAGAT
Protein sequenceShow/hide protein sequence
MVSKLPRVELQTKIWLSKMATLFFLCLLMSFFFYAQAKNCHRVWTCKGDIRCWEDCKNQHNGKGLCDLYTAPSVPKQCFCAYNC