CuGenDBv2

Gene ID	Clc03G19030
Organism	Citrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
Description	60S ribosomal protein L14-2-like
Genome location	ClcChr03:31263492..31264023
RNA-Seq Expression	Clc03G19030
Synteny	Clc03G19030
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0007018 - microtubule-based movement (biological process) GO:0042273 - ribosomal large subunit biogenesis (biological process) GO:0022625 - cytosolic large ribosomal subunit (cellular component) GO:0003723 - RNA binding (molecular function) GO:0003735 - structural constituent of ribosome (molecular function) GO:0003774 - motor activity (molecular function) GO:0005524 - ATP binding (molecular function) GO:0008017 - microtubule binding (molecular function)
InterPro domains	IPR002784 - Ribosomal protein L14e domain IPR008991 - Translation protein SH3-like domain superfamily IPR014722 - Ribosomal protein L2, domain 2 IPR039660 - Ribosomal protein L14

Homology

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GenBank top hits

e value

%identity

Alignment

BAA83469.1 Csf-1, partial [Cucumis sativus]

5.6e-31

78.1

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Query:  LTENRAVVDG-----SQMNFKRLYLTDIKIDIKRVAAKNQEVIEAMKGGDVQKKWENSSWGRKLIVKQRRGSLDHDFDRFKLMLEKIKRAGLVRQELAKL
        + +NRA+VD      SQMNFKRL LTDIKIDIKRV  K +E+IEAMK GDVQKKWENSSWGRKLIVK+RR SL +DFDRFKLML KIKRAGLVRQELAKL
Subjt:  LTENRAVVDG-----SQMNFKRLYLTDIKIDIKRVAAKNQEVIEAMKGGDVQKKWENSSWGRKLIVKQRRGSLDHDFDRFKLMLEKIKRAGLVRQELAKL

Query:  KKAES
        KKAE+
Subjt:  KKAES

KAA0050713.1 kinesin-like protein KIF22 [Cucumis melo var. makuwa]

5.6e-31

78.1

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Query:  LTENRAVVDG-----SQMNFKRLYLTDIKIDIKRVAAKNQEVIEAMKGGDVQKKWENSSWGRKLIVKQRRGSLDHDFDRFKLMLEKIKRAGLVRQELAKL
        + +NRA+VD      SQMNFKRL LTDIKIDIKRV  K +E+IEAMK GDVQKKWENSSWGRKLIVK+RR SL +DFDRFKLML KIKRAGLVRQELAKL
Subjt:  LTENRAVVDG-----SQMNFKRLYLTDIKIDIKRVAAKNQEVIEAMKGGDVQKKWENSSWGRKLIVKQRRGSLDHDFDRFKLMLEKIKRAGLVRQELAKL

Query:  KKAES
        KKAE+
Subjt:  KKAES

XP_004147153.1 60S ribosomal protein L14-2 [Cucumis sativus]

5.6e-31

78.1

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Query:  LTENRAVVDG-----SQMNFKRLYLTDIKIDIKRVAAKNQEVIEAMKGGDVQKKWENSSWGRKLIVKQRRGSLDHDFDRFKLMLEKIKRAGLVRQELAKL
        + +NRA+VD      SQMNFKRL LTDIKIDIKRV  K +E+IEAMK GDVQKKWENSSWGRKLIVK+RR SL +DFDRFKLML KIKRAGLVRQELAKL
Subjt:  LTENRAVVDG-----SQMNFKRLYLTDIKIDIKRVAAKNQEVIEAMKGGDVQKKWENSSWGRKLIVKQRRGSLDHDFDRFKLMLEKIKRAGLVRQELAKL

Query:  KKAES
        KKAE+
Subjt:  KKAES

XP_022138314.1 60S ribosomal protein L14-2-like [Momordica charantia]

1.3e-30

78.1

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Query:  LTENRAVVDG-----SQMNFKRLYLTDIKIDIKRVAAKNQEVIEAMKGGDVQKKWENSSWGRKLIVKQRRGSLDHDFDRFKLMLEKIKRAGLVRQELAKL
        + +NRA+VD      SQMNFKRL LTDIKIDIKRV  K +E+IEAMK GDVQKKWENSSWGRKLIV++RR SL +DFDRFKLML KIKRAGLVRQELAKL
Subjt:  LTENRAVVDG-----SQMNFKRLYLTDIKIDIKRVAAKNQEVIEAMKGGDVQKKWENSSWGRKLIVKQRRGSLDHDFDRFKLMLEKIKRAGLVRQELAKL

Query:  KKAES
        KKAES
Subjt:  KKAES

XP_038906794.1 60S ribosomal protein L14-2-like [Benincasa hispida]

2.5e-31

79.05

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Query:  LTENRAVVDG-----SQMNFKRLYLTDIKIDIKRVAAKNQEVIEAMKGGDVQKKWENSSWGRKLIVKQRRGSLDHDFDRFKLMLEKIKRAGLVRQELAKL
        + +NRA+VD      SQMNFKRL LTDIKIDIKRV  K +E+IEAMK GDVQKKWENSSWGRKLIVK+RR SL +DFDRFKLML KIKRAGLVRQELAKL
Subjt:  LTENRAVVDG-----SQMNFKRLYLTDIKIDIKRVAAKNQEVIEAMKGGDVQKKWENSSWGRKLIVKQRRGSLDHDFDRFKLMLEKIKRAGLVRQELAKL

Query:  KKAES
        KKAES
Subjt:  KKAES

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LIH9 Ribosomal_L14e domain-containing protein

2.7e-31

78.1

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Query:  LTENRAVVDG-----SQMNFKRLYLTDIKIDIKRVAAKNQEVIEAMKGGDVQKKWENSSWGRKLIVKQRRGSLDHDFDRFKLMLEKIKRAGLVRQELAKL
        + +NRA+VD      SQMNFKRL LTDIKIDIKRV  K +E+IEAMK GDVQKKWENSSWGRKLIVK+RR SL +DFDRFKLML KIKRAGLVRQELAKL
Subjt:  LTENRAVVDG-----SQMNFKRLYLTDIKIDIKRVAAKNQEVIEAMKGGDVQKKWENSSWGRKLIVKQRRGSLDHDFDRFKLMLEKIKRAGLVRQELAKL

Query:  KKAES
        KKAE+
Subjt:  KKAES

A0A1S3CD11 60S ribosomal protein L14-2-like

2.7e-31

78.1

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Query:  LTENRAVVDG-----SQMNFKRLYLTDIKIDIKRVAAKNQEVIEAMKGGDVQKKWENSSWGRKLIVKQRRGSLDHDFDRFKLMLEKIKRAGLVRQELAKL
        + +NRA+VD      SQMNFKRL LTDIKIDIKRV  K +E+IEAMK GDVQKKWENSSWGRKLIVK+RR SL +DFDRFKLML KIKRAGLVRQELAKL
Subjt:  LTENRAVVDG-----SQMNFKRLYLTDIKIDIKRVAAKNQEVIEAMKGGDVQKKWENSSWGRKLIVKQRRGSLDHDFDRFKLMLEKIKRAGLVRQELAKL

Query:  KKAES
        KKAE+
Subjt:  KKAES

A0A5A7U4A6 Kinesin-like protein KIF22

2.7e-31

78.1

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Query:  LTENRAVVDG-----SQMNFKRLYLTDIKIDIKRVAAKNQEVIEAMKGGDVQKKWENSSWGRKLIVKQRRGSLDHDFDRFKLMLEKIKRAGLVRQELAKL
        + +NRA+VD      SQMNFKRL LTDIKIDIKRV  K +E+IEAMK GDVQKKWENSSWGRKLIVK+RR SL +DFDRFKLML KIKRAGLVRQELAKL
Subjt:  LTENRAVVDG-----SQMNFKRLYLTDIKIDIKRVAAKNQEVIEAMKGGDVQKKWENSSWGRKLIVKQRRGSLDHDFDRFKLMLEKIKRAGLVRQELAKL

Query:  KKAES
        KKAE+
Subjt:  KKAES

A0A6J1KZT6 60S ribosomal protein L14-2-like

6.1e-31

77.14

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Query:  LTENRAVVDG-----SQMNFKRLYLTDIKIDIKRVAAKNQEVIEAMKGGDVQKKWENSSWGRKLIVKQRRGSLDHDFDRFKLMLEKIKRAGLVRQELAKL
        + +NRA+VD      SQMNFKRL LTDIKIDIKRV  K +E+IEAMK GDVQKKWENSSWGRKLIVK+RR SL +DFDRFKLML KIKRAGLVRQEL+KL
Subjt:  LTENRAVVDG-----SQMNFKRLYLTDIKIDIKRVAAKNQEVIEAMKGGDVQKKWENSSWGRKLIVKQRRGSLDHDFDRFKLMLEKIKRAGLVRQELAKL

Query:  KKAES
        KKAE+
Subjt:  KKAES

Q9SXL9 Csf-1 protein (Fragment)

2.7e-31

78.1

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Query:  LTENRAVVDG-----SQMNFKRLYLTDIKIDIKRVAAKNQEVIEAMKGGDVQKKWENSSWGRKLIVKQRRGSLDHDFDRFKLMLEKIKRAGLVRQELAKL
        + +NRA+VD      SQMNFKRL LTDIKIDIKRV  K +E+IEAMK GDVQKKWENSSWGRKLIVK+RR SL +DFDRFKLML KIKRAGLVRQELAKL
Subjt:  LTENRAVVDG-----SQMNFKRLYLTDIKIDIKRVAAKNQEVIEAMKGGDVQKKWENSSWGRKLIVKQRRGSLDHDFDRFKLMLEKIKRAGLVRQELAKL

Query:  KKAES
        KKAE+
Subjt:  KKAES

SwissProt top hits

e value

%identity

Alignment

O46160 60S ribosomal protein L14

9.7e-10

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Query:  LTENRAVVDG-------SQMNFKRLYLTDIKIDIKRVAAKNQEVIEAMKGGDVQKKWENSSWGRKLIVKQRRGSLDHDFDRFKLMLEKIKRAGLVRQELA
        + +NRA+VDG         MNFK L LT++K      +AK   V +A +  ++ KKWE S   +K+  K++R +L  DF+RFKLM  K  R  L++ E  
Subjt:  LTENRAVVDG-------SQMNFKRLYLTDIKIDIKRVAAKNQEVIEAMKGGDVQKKWENSSWGRKLIVKQRRGSLDHDFDRFKLMLEKIKRAGLVRQELA

Query:  KLKKA
        KL+KA
Subjt:  KLKKA

P55844 Probable 60S ribosomal protein L14

7.7e-23

60.78

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Query:  LTENRAVVDG-----SQMNFKRLYLTDIKIDIKRVAAKNQEVIEAMKGGDVQKKWENSSWGRKLIVKQRRGSLDHDFDRFKLMLEKIKRAGLVRQELAKL
        + + RA+VD      S +NFKRL LTD+KIDIKRV  K +++I+A++  DV+ KW  SSWGRKLIVK+ R +L +DFDRFK+ML KIKRA  VRQELAKL
Subjt:  LTENRAVVDG-----SQMNFKRLYLTDIKIDIKRVAAKNQEVIEAMKGGDVQKKWENSSWGRKLIVKQRRGSLDHDFDRFKLMLEKIKRAGLVRQELAKL

Query:  KK
        KK
Subjt:  KK

Q7XYA7 60S ribosomal protein L14

2.4e-08

36.89

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Query:  LTENRAVVDGSQ-------MNFKRLYLTDIKIDIKRVAAKNQEVIEAMKGGDVQKKWENSSWGRKLIVKQRRGSLDHDFDRFKLMLEKIKRAGLVRQELA
        L +NR +VD          +N KR+ LT IK+D     A   EV        V + +  S WG+KL  +++R +LD DF RFK+M+ ++K++  +  ELA
Subjt:  LTENRAVVDGSQ-------MNFKRLYLTDIKIDIKRVAAKNQEVIEAMKGGDVQKKWENSSWGRKLIVKQRRGSLDHDFDRFKLMLEKIKRAGLVRQELA

Query:  KLK
        KLK
Subjt:  KLK

Q9SIM4 60S ribosomal protein L14-1

2.4e-24

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Query:  ENRAVVDGS-----QMNFKRLYLTDIKIDIKRVAAKNQEVIEAMKGGDVQKKWENSSWGRKLIVKQRRGSLDHDFDRFKLMLEKIKRAGLVRQELAKLKK
        +NRA+VD       QMN KRL LTDI IDI RV  K + +IEAM+  DV+ KWE SSWGRKLIV++RR +L +DFDRFK+ML KIKRAG+VRQELAKLK+
Subjt:  ENRAVVDGS-----QMNFKRLYLTDIKIDIKRVAAKNQEVIEAMKGGDVQKKWENSSWGRKLIVKQRRGSLDHDFDRFKLMLEKIKRAGLVRQELAKLKK

Q9T043 60S ribosomal protein L14-2

4.8e-25

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Query:  ENRAVVDGS-----QMNFKRLYLTDIKIDIKRVAAKNQEVIEAMKGGDVQKKWENSSWGRKLIVKQRRGSLDHDFDRFKLMLEKIKRAGLVRQELAKLKK
        +NRA+VD       QMNFKRL LTDI IDI RV  K + +IEAM+  DV+ KWE SSWGRKLIV++RR +L +DFDRFK+ML KIK+AG+VRQELAKLKK
Subjt:  ENRAVVDGS-----QMNFKRLYLTDIKIDIKRVAAKNQEVIEAMKGGDVQKKWENSSWGRKLIVKQRRGSLDHDFDRFKLMLEKIKRAGLVRQELAKLKK

Arabidopsis top hits

e value

%identity

Alignment

AT2G20450.1 Ribosomal protein L14

1.7e-25

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Query:  ENRAVVDGS-----QMNFKRLYLTDIKIDIKRVAAKNQEVIEAMKGGDVQKKWENSSWGRKLIVKQRRGSLDHDFDRFKLMLEKIKRAGLVRQELAKLKK
        +NRA+VD       QMN KRL LTDI IDI RV  K + +IEAM+  DV+ KWE SSWGRKLIV++RR +L +DFDRFK+ML KIKRAG+VRQELAKLK+
Subjt:  ENRAVVDGS-----QMNFKRLYLTDIKIDIKRVAAKNQEVIEAMKGGDVQKKWENSSWGRKLIVKQRRGSLDHDFDRFKLMLEKIKRAGLVRQELAKLKK

AT4G27090.1 Ribosomal protein L14

3.4e-26

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Query:  ENRAVVDGS-----QMNFKRLYLTDIKIDIKRVAAKNQEVIEAMKGGDVQKKWENSSWGRKLIVKQRRGSLDHDFDRFKLMLEKIKRAGLVRQELAKLKK
        +NRA+VD       QMNFKRL LTDI IDI RV  K + +IEAM+  DV+ KWE SSWGRKLIV++RR +L +DFDRFK+ML KIK+AG+VRQELAKLKK
Subjt:  ENRAVVDGS-----QMNFKRLYLTDIKIDIKRVAAKNQEVIEAMKGGDVQKKWENSSWGRKLIVKQRRGSLDHDFDRFKLMLEKIKRAGLVRQELAKLKK

Sequences

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CDS sequence

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ATGGGATCCACTACTTTTACCTTTACCGTTATAGTTACGAAAACACAGCCATATTACAATTCATGTGAACGTGGCCTATATTTAACTGAGAATCGTGCTGTGGTTGATGG
ATCTCAAATGAATTTTAAGAGACTCTACTTGACAGATATCAAAATTGATATTAAGAGGGTCGCTGCTAAGAATCAGGAAGTGATTGAAGCCATGAAAGGTGGGGATGTCC
AGAAGAAATGGGAGAATAGCTCTTGGGGCAGAAAATTGATTGTTAAACAGAGAAGAGGCTCACTGGATCATGACTTCGACCGGTTCAAGCTTATGTTGGAGAAGATTAAG
AGGGCTGGATTGGTTAGGCAGGAGCTTGCAAAGTTGAAGAAGGCCGAGTCCCAGAAGATTAAGAGGGCTGTCGACTTTCTTTTAACCTCTATAGGTCGTTGA

mRNA sequence

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Protein sequence

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MGSTTFTFTVIVTKTQPYYNSCERGLYLTENRAVVDGSQMNFKRLYLTDIKIDIKRVAAKNQEVIEAMKGGDVQKKWENSSWGRKLIVKQRRGSLDHDFDRFKLMLEKIK
RAGLVRQELAKLKKAESQKIKRAVDFLLTSIGR

Clc03G19030 (gene) of Watermelon (cordophanus) v2 genome