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Clc03G19330 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc03G19330
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionIGR domain-containing protein
Genome locationClcChr03:31561869..31573402
RNA-Seq ExpressionClc03G19330
SyntenyClc03G19330
Gene Ontology termsNA
InterPro domainsIPR019083 - IGR protein motif


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6590496.1 hypothetical protein SDJN03_15919, partial [Cucurbita argyrosperma subsp. sororia]3.0e-3294.81Show/hide
Query:  WVGLVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWRPRSDSLKA
        +V  VGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWRPRSD+LKA
Subjt:  WVGLVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWRPRSDSLKA

KAG7024029.1 hypothetical protein SDJN02_15058 [Cucurbita argyrosperma subsp. argyrosperma]3.0e-3294.81Show/hide
Query:  WVGLVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWRPRSDSLKA
        +V  VGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWRPRSD+LKA
Subjt:  WVGLVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWRPRSDSLKA

XP_022961412.1 uncharacterized protein LOC111461991 [Cucurbita moschata]3.0e-3294.81Show/hide
Query:  WVGLVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWRPRSDSLKA
        +V  VGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWRPRSD+LKA
Subjt:  WVGLVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWRPRSDSLKA

XP_023516779.1 uncharacterized protein LOC111780577 [Cucurbita pepo subsp. pepo]2.3e-3270.54Show/hide
Query:  SLLNEFMADLFGAFVGSNLRGILGIILKGLIGLQGWVGLVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRL
        S+L  + A LF  F   ++                +V  VGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRL
Subjt:  SLLNEFMADLFGAFVGSNLRGILGIILKGLIGLQGWVGLVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRL

Query:  GLWRPRSDSLKA
        GLWRPRSD+LKA
Subjt:  GLWRPRSDSLKA

XP_038879496.1 uncharacterized protein LOC120071346 isoform X3 [Benincasa hispida]5.1e-32100Show/hide
Query:  VGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWRPRSDSLK
        VGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWRPRSDSLK
Subjt:  VGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWRPRSDSLK

TrEMBL top hitse value%identityAlignment
A0A0A0M1A4 IGR domain-containing protein2.7e-3167.86Show/hide
Query:  SLLNEFMADLFGAFVGSNLRGILGIILKGLIGLQGWVGLVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRL
        S+L  + A LF  F   +                 ++  VGIPEFL G+GHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRL
Subjt:  SLLNEFMADLFGAFVGSNLRGILGIILKGLIGLQGWVGLVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRL

Query:  GLWRPRSDSLKA
        GLWRPR DSLKA
Subjt:  GLWRPRSDSLKA

A0A1S3BPD9 uncharacterized protein LOC1034921089.3e-3267.86Show/hide
Query:  SLLNEFMADLFGAFVGSNLRGILGIILKGLIGLQGWVGLVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRL
        S+L  + A LF  F   +                 ++  VGIPEFLNG+GHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRL
Subjt:  SLLNEFMADLFGAFVGSNLRGILGIILKGLIGLQGWVGLVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRL

Query:  GLWRPRSDSLKA
        GLWRPR DSLK+
Subjt:  GLWRPRSDSLKA

A0A6J1DML5 uncharacterized protein LOC1110218234.6e-3190.91Show/hide
Query:  WVGLVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWRPRSDSLKA
        +V  VGIPEFLNGVGHGVESHV KLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKY HKYRLGLWRPR+DS+KA
Subjt:  WVGLVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWRPRSDSLKA

A0A6J1HA49 uncharacterized protein LOC1114619911.4e-3294.81Show/hide
Query:  WVGLVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWRPRSDSLKA
        +V  VGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWRPRSD+LKA
Subjt:  WVGLVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWRPRSDSLKA

A0A6J1HZ75 uncharacterized protein LOC1114679435.5e-3294.74Show/hide
Query:  WVGLVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWRPRSDSLK
        +V  VGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWRPRSD+LK
Subjt:  WVGLVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWRPRSDSLK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G05810.1 FUNCTIONS IN: molecular_function unknown9.5e-2976.71Show/hide
Query:  VGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWRPRSDSLKA
        VGIPEFL G+G G E+H+AK+E+EIGD  KLLVTRTL+LKKLGIPCKHRKLILKY  KYRLGLW+PR+D++KA
Subjt:  VGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWRPRSDSLKA

AT5G26800.1 FUNCTIONS IN: molecular_function unknown8.6e-3078.08Show/hide
Query:  VGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWRPRSDSLKA
        VGIPEFL+G+G GVE+H+AKLE+E+GD  KLLVTRTL+LKK GIPCKHRKLILKY+HKYRLGLW+PR+D++KA
Subjt:  VGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKKLGIPCKHRKLILKYTHKYRLGLWRPRSDSLKA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGGTTCACTTGCTTGGTGTGGGTGTGGGTGATTTTTGTTGGCTATTGTGACCAGTTTGAGAAGCAACCAAGAATTGAAAAGTTTAAGCCCTACCATCACCTA
ATTTTTCTCTCTCCCTCTCCCACCTTTGCCGCTCGCCGGAACGCCCCCACCGCCTCTCTGTTGCAACCTAACCCCGGCACGCCACGCACTGTCTTCTGCCGCAGT
CCCTTCAACTCTCGTTCATTCGCCGTTGAGATTTGTTGTCCACAGCAAGAAAGATGGCATGGAGGCAGATTATCTCCAACCATAGGTCTATACTGCAACCATACT
CAGCTCCTTTATTTGCTAGATTCTTTTCTAAATCTACCCCATATGTTGACATGGAAATGGAGTTTATTTGTTATCTCTTTGTTGAATGAATTTATGGCAGACTTG
TTTGGTGCTTTTGTGGGGAGTAATCTGAGAGGAATTTTGGGAATAATCCTAAAGGGGTTGATAGGTCTTCAGGGGTGGGTGGGACTTGTCGGGATACCAGAATTT
TTAAATGGTGTTGGGCATGGGGTTGAGTCACATGTGGCTAAACTTGAATCAGAGATTGGTGACTTCCAGAAGCTGCTTGTTACTCGCACACTTAAGCTGAAAAAA
CTTGGAATTCCATGCAAACATAGGAAGCTGATATTGAAGTACACCCACAAGTACAGACTTGGACTATGGAGGCCTCGATCTGATTCCTTGAAGGCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGGTTCACTTGCTTGGTGTGGGTGTGGGTGATTTTTGTTGGCTATTGTGACCAGTTTGAGAAGCAACCAAGAATTGAAAAGTTTAAGCCCTACCATCACCTA
ATTTTTCTCTCTCCCTCTCCCACCTTTGCCGCTCGCCGGAACGCCCCCACCGCCTCTCTGTTGCAACCTAACCCCGGCACGCCACGCACTGTCTTCTGCCGCAGT
CCCTTCAACTCTCGTTCATTCGCCGTTGAGATTTGTTGTCCACAGCAAGAAAGATGGCATGGAGGCAGATTATCTCCAACCATAGGTCTATACTGCAACCATACT
CAGCTCCTTTATTTGCTAGATTCTTTTCTAAATCTACCCCATATGTTGACATGGAAATGGAGTTTATTTGTTATCTCTTTGTTGAATGAATTTATGGCAGACTTG
TTTGGTGCTTTTGTGGGGAGTAATCTGAGAGGAATTTTGGGAATAATCCTAAAGGGGTTGATAGGTCTTCAGGGGTGGGTGGGACTTGTCGGGATACCAGAATTT
TTAAATGGTGTTGGGCATGGGGTTGAGTCACATGTGGCTAAACTTGAATCAGAGATTGGTGACTTCCAGAAGCTGCTTGTTACTCGCACACTTAAGCTGAAAAAA
CTTGGAATTCCATGCAAACATAGGAAGCTGATATTGAAGTACACCCACAAGTACAGACTTGGACTATGGAGGCCTCGATCTGATTCCTTGAAGGCCTGATGGTTT
TAACTATGTTTACTAGGTGATGGAATCGCTAGCTGATCTTCAGTTTGTAAAACTTCGAGGGACAGTATTTCATTTACTAAATCTAACGCGTATCCTTATTTTACC
GCTTTTGAATTGTTTCTATTCATTTACAAACTATATACCCGTTCAGTTCGTTTAAGATGATGCATGAATCTTAAATTTAAGTGAACTGAGGGTTCAAATTTATAT
CAACTGCATGAATCTTCTGGTAA
Protein sequenceShow/hide protein sequence
MRFTCLVWVWVIFVGYCDQFEKQPRIEKFKPYHHLIFLSPSPTFAARRNAPTASLLQPNPGTPRTVFCRSPFNSRSFAVEICCPQQERWHGGRLSPTIGLYCNHT
QLLYLLDSFLNLPHMLTWKWSLFVISLLNEFMADLFGAFVGSNLRGILGIILKGLIGLQGWVGLVGIPEFLNGVGHGVESHVAKLESEIGDFQKLLVTRTLKLKK
LGIPCKHRKLILKYTHKYRLGLWRPRSDSLKA