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Clc03G19480 (gene) of Watermelon (cordophanus) v2 genome

Gene IDClc03G19480
OrganismCitrullus lanatus subsp. cordophanus (Watermelon (cordophanus) v2)
DescriptionUnknown protein
Genome locationClcChr03:31686672..31686983
RNA-Seq ExpressionClc03G19480
SyntenyClc03G19480
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6588556.1 hypothetical protein SDJN03_17121, partial [Cucurbita argyrosperma subsp. sororia]9.4e-2870.71Show/hide
Query:  MGGNRAKKSHSSSFSFLGALFKSKRSGRRGDHYYEQQQQQQGSSWDDFSCPTKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVFETQRQTVTLPP
        MGGN+ KKSH SSFSF G  FKSKR+ R+G+HY            D+ SCP KVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRV ET+RQTVT+ P
Subjt:  MGGNRAKKSHSSSFSFLGALFKSKRSGRRGDHYYEQQQQQQGSSWDDFSCPTKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVFETQRQTVTLPP
KAG6590516.1 hypothetical protein SDJN03_15939, partial [Cucurbita argyrosperma subsp. sororia]4.8e-2468.69Show/hide
Query:  MGGNRAKKSHSSSFSFLGALFKSKRSGRRGDHYYEQQQQQQGSSWDDFSCPTKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVFETQRQTVTLPP
        MGGNR KK+ SSSFSFL A FKSKRS R+GD Y        GS+WDD S P+KVWPSDADK H WVAEPGIDRKA DYI RIH +RV ET+ QTVT+ P
Subjt:  MGGNRAKKSHSSSFSFLGALFKSKRSGRRGDHYYEQQQQQQGSSWDDFSCPTKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVFETQRQTVTLPP
KGN45870.1 hypothetical protein Csa_004960 [Cucumis sativus]8.2e-2463.37Show/hide
Query:  MGGNRAKKSHSSSFSFLGALFKSKRSGRRGDHYYEQQQQQQGSSW-DDFSCPTKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVFETQRQTVTLPP
        MGGNR KKSHSS   F  + FKSKR GR+GDHY        G +W D+     KVWPSD DK H W+AEPGIDRKAKDYIDRI+RNRVFE++RQTVT+ P
Subjt:  MGGNRAKKSHSSSFSFLGALFKSKRSGRRGDHYYEQQQQQQGSSW-DDFSCPTKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVFETQRQTVTLPP

Query:  D
        +
Subjt:  D
KGN45873.1 hypothetical protein Csa_005148 [Cucumis sativus]3.4e-2260Show/hide
Query:  MGGNRAKKSHSSSFSFLGALFKSKRSGRRGDHYYEQQQQQQGSSWDDFSCPTKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVFETQRQTVTLPPD
        MGG+  +K   SSFS   + FKSKR GR+GD Y      + G++W+D    +KVWPSD DK +RWVAEPGIDRKAKDYIDRI++NRVFET+RQTVT+ P+
Subjt:  MGGNRAKKSHSSSFSFLGALFKSKRSGRRGDHYYEQQQQQQGSSWDDFSCPTKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVFETQRQTVTLPPD
KGN65989.1 hypothetical protein Csa_006868 [Cucumis sativus]1.1e-4186.14Show/hide
Query:  MGGNRAKKSHSSSFSFLGALFKSKRSGRRGDHYYEQQQQQQGSSWDDFSCPTKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVFETQRQTVTLPPD
        MGGNR KKSH+SSFSFLG LFKSKRS R+GDHYY+   QQQG+SW+DFSCP+KVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVFET RQTVTLPP+
Subjt:  MGGNRAKKSHSSSFSFLGALFKSKRSGRRGDHYYEQQQQQQGSSWDDFSCPTKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVFETQRQTVTLPPD

Query:  S
        S
Subjt:  S
TrEMBL top hitse value%identityAlignment
A0A0A0K7Y2 Uncharacterized protein4.0e-2463.37Show/hide
Query:  MGGNRAKKSHSSSFSFLGALFKSKRSGRRGDHYYEQQQQQQGSSW-DDFSCPTKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVFETQRQTVTLPP
        MGGNR KKSHSS   F  + FKSKR GR+GDHY        G +W D+     KVWPSD DK H W+AEPGIDRKAKDYIDRI+RNRVFE++RQTVT+ P
Subjt:  MGGNRAKKSHSSSFSFLGALFKSKRSGRRGDHYYEQQQQQQGSSW-DDFSCPTKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVFETQRQTVTLPP

Query:  D
        +
Subjt:  D
A0A0A0K8V3 Uncharacterized protein1.7e-2266.67Show/hide
Query:  MGGNRAKKSHSSSFSFLGALFKSKRSGRRGDHYYEQQQQQQGSSW-DDFSCPTKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVFETQRQTVTLP
        MGG++ KKSH SSFSF   L KSK S R+GDHY        G SW D+ S   KVWPSD DK H WVAEPGIDRKAKDYIDRI+RNRVFE++RQTVT+P
Subjt:  MGGNRAKKSHSSSFSFLGALFKSKRSGRRGDHYYEQQQQQQGSSW-DDFSCPTKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVFETQRQTVTLP
A0A0A0K8W0 Uncharacterized protein1.7e-2260Show/hide
Query:  MGGNRAKKSHSSSFSFLGALFKSKRSGRRGDHYYEQQQQQQGSSWDDFSCPTKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVFETQRQTVTLPPD
        MGG+  +K   SSFS   + FKSKR GR+GD Y      + G++W+D    +KVWPSD DK +RWVAEPGIDRKAKDYIDRI++NRVFET+RQTVT+ P+
Subjt:  MGGNRAKKSHSSSFSFLGALFKSKRSGRRGDHYYEQQQQQQGSSWDDFSCPTKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVFETQRQTVTLPPD
A0A0A0KBW1 Uncharacterized protein6.8e-2463.37Show/hide
Query:  MGGNRAKKSHSSSFSFLGALFKSKRSGRRGDHYYEQQQQQQGSSW-DDFSCPTKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVFETQRQTVTLPP
        MGGNR KKSHSS   F  + FKS+R GR+GDHY        G +W D+     KVWPSD DK H WVAEPGIDRKAKDYIDRI+RNRVFE++RQTVT+ P
Subjt:  MGGNRAKKSHSSSFSFLGALFKSKRSGRRGDHYYEQQQQQQGSSW-DDFSCPTKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVFETQRQTVTLPP

Query:  D
        +
Subjt:  D
A0A0A0LY99 Uncharacterized protein5.5e-4286.14Show/hide
Query:  MGGNRAKKSHSSSFSFLGALFKSKRSGRRGDHYYEQQQQQQGSSWDDFSCPTKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVFETQRQTVTLPPD
        MGGNR KKSH+SSFSFLG LFKSKRS R+GDHYY+   QQQG+SW+DFSCP+KVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVFET RQTVTLPP+
Subjt:  MGGNRAKKSHSSSFSFLGALFKSKRSGRRGDHYYEQQQQQQGSSWDDFSCPTKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVFETQRQTVTLPPD

Query:  S
        S
Subjt:  S
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G48325.1 Expressed protein7.7e-0428.57Show/hide
Query:  MGGNRAKKSHSSSFSFLGALFKSKRSGRRGDHYYEQQQQQQGSSWDDFSCPTKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVFETQ
        MGG+  ++  SSSFS + +LF   R  +  D++ E++           +   ++  +D D C   +AEP IDR+A  +I + H   + +T+
Subjt:  MGGNRAKKSHSSSFSFLGALFKSKRSGRRGDHYYEQQQQQQGSSWDDFSCPTKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVFETQ
AT3G05858.1 unknown protein2.9e-1143.75Show/hide
Query:  MGGNRAKKSHSSSFSFLGALFKSKRSGRRGDHYYEQQQQQQGSSWDDFSCPTKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVFETQRQTVT
        MGG    +SHSS    L + FK++RS R           +   SWDDF    K   SD DK + WVAEPGIDRKA  +I + H  RV E++RQT++
Subjt:  MGGNRAKKSHSSSFSFLGALFKSKRSGRRGDHYYEQQQQQQGSSWDDFSCPTKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVFETQRQTVT
AT5G26620.1 unknown protein1.4e-1048.61Show/hide
Query:  RRGDHYYEQQQQQQGSSWDDFSCPTKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVFETQRQTVTLPP
        RR  H+    + +  +SWDD     K W SD DK + WVAEPGIDRKA  +I + H +RV E++RQ  TLPP
Subjt:  RRGDHYYEQQQQQQGSSWDDFSCPTKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVFETQRQTVTLPP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGGGAACAGGGCGAAGAAATCTCATTCATCTTCATTTTCCTTCTTGGGGGCTCTGTTCAAATCAAAAAGATCAGGTAGAAGAGGAGATCATTACTATGAGCAGCA
GCAGCAGCAACAGGGCAGCAGCTGGGACGACTTCTCATGCCCTACCAAGGTGTGGCCCAGCGACGCCGATAAATGCCACCGTTGGGTGGCTGAGCCCGGCATCGATCGAA
AGGCCAAAGATTACATTGACAGGATCCACCGTAACCGTGTTTTCGAAACCCAACGCCAAACCGTCACCCTTCCTCCTGATTCCAACTGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGGGAACAGGGCGAAGAAATCTCATTCATCTTCATTTTCCTTCTTGGGGGCTCTGTTCAAATCAAAAAGATCAGGTAGAAGAGGAGATCATTACTATGAGCAGCA
GCAGCAGCAACAGGGCAGCAGCTGGGACGACTTCTCATGCCCTACCAAGGTGTGGCCCAGCGACGCCGATAAATGCCACCGTTGGGTGGCTGAGCCCGGCATCGATCGAA
AGGCCAAAGATTACATTGACAGGATCCACCGTAACCGTGTTTTCGAAACCCAACGCCAAACCGTCACCCTTCCTCCTGATTCCAACTGCTAA
Protein sequenceShow/hide protein sequence
MGGNRAKKSHSSSFSFLGALFKSKRSGRRGDHYYEQQQQQQGSSWDDFSCPTKVWPSDADKCHRWVAEPGIDRKAKDYIDRIHRNRVFETQRQTVTLPPDSNC